Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g29305 Brassica carinata HOM05D007923 ORTHO05D009651 2.3e-84 315.5 152 100.0
C05p55890 Brassica napus HOM05D007923 ORTHO05D009651 2.3e-84 315.5 152 100.0
BolC5t34258H Brassica oleracea HOM05D007923 ORTHO05D009651 2.3e-84 315.5 152 100.0
BcaC05g29302 Brassica carinata HOM05D007923 ORTHO05D009651 1.7e-71 272.7 152 86.2
C05p55870 Brassica napus HOM05D007923 ORTHO05D009651 1.7e-71 272.7 152 86.2
BolC5t34256H Brassica oleracea HOM05D007923 ORTHO05D009651 1.7e-71 272.7 152 86.2
BcaC05g29304 Brassica carinata HOM05D007923 ORTHO05D009651 1.2e-69 266.5 152 84.9
C05p55880 Brassica napus HOM05D007923 ORTHO05D009651 1.2e-69 266.5 152 84.9
BolC5t34257H Brassica oleracea HOM05D007923 ORTHO05D009651 1.2e-69 266.5 152 84.9
A05p37340 Brassica napus HOM05D007923 ORTHO05D009651 1.8e-68 262.7 152 84.2
BraA05t22531Z Brassica rapa HOM05D007923 ORTHO05D009651 1.8e-68 262.7 152 84.2
BraA05t22534Z Brassica rapa HOM05D007923 ORTHO05D009651 2.3e-68 262.3 152 84.2
A05p37350 Brassica napus HOM05D007923 ORTHO05D009651 1.1e-67 260.0 152 83.6
BraA05t22532Z Brassica rapa HOM05D007923 ORTHO05D009651 1.1e-67 260.0 152 83.6
A05p37360 Brassica napus HOM05D007923 ORTHO05D009651 3.3e-67 258.5 152 82.9
BraA05t22533Z Brassica rapa HOM05D007923 ORTHO05D009651 3.3e-67 258.5 152 82.9
BraA05t22535Z Brassica rapa HOM05D007923 ORTHO05D009651 9.6e-67 256.9 152 80.9
BcaB06g25567 Brassica carinata HOM05D007923 ORTHO05D009651 1.3e-60 236.5 151 76.2
BcaB06g25556 Brassica carinata HOM05D007923 ORTHO05D009651 3.0e-60 235.3 151 74.8
A05p37330 Brassica napus HOM05D007923 ORTHO05D009651 2.7e-53 212.2 146 70.5
BraA05t22530Z Brassica rapa HOM05D007923 ORTHO05D009651 2.7e-53 212.2 146 70.5
BcaC05g29301 Brassica carinata HOM05D007923 ORTHO05D009651 6.1e-53 211.1 151 68.9
C05p55860 Brassica napus HOM05D007923 ORTHO05D009651 6.1e-53 211.1 151 68.9
BolC5t34255H Brassica oleracea HOM05D007923 ORTHO05D009651 6.1e-53 211.1 151 68.9
BcaC05g29300 Brassica carinata HOM05D007923 ORTHO05D009651 3.9e-52 208.4 151 67.5
C05p55840 Brassica napus HOM05D007923 ORTHO05D009651 3.9e-52 208.4 151 67.5
BolC5t34253H Brassica oleracea HOM05D007923 ORTHO05D009651 3.9e-52 208.4 151 67.5
AL3G23600 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 1.1e-41 173.7 140 58.6
Sp3g10220 Schrenkiella parvula HOM05D007923 ORTHO05D009651 7.0e-41 171.0 148 56.1
AT1G47470 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 4.5e-40 168.3 146 54.8
AT1G45190 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 7.7e-40 167.5 147 53.7
BcaC09g48206 Brassica carinata HOM05D007923 ORTHO05D009651 3.8e-39 165.2 147 55.8
BolC1t05274H Brassica oleracea HOM05D007923 ORTHO05D009651 3.8e-39 165.2 147 55.8
BraA01t04147Z Brassica rapa HOM05D007923 ORTHO05D009651 5.0e-39 164.9 147 55.1
CARHR086550 Cardamine hirsuta HOM05D007923 ORTHO05D009651 9.4e-38 160.6 147 49.7
AT3G11990 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 4.7e-37 158.3 146 51.4
Carub.0008s0480 Capsella rubella HOM05D007923 ORTHO05D009651 1.0e-36 157.1 147 50.3
C06p22200 Brassica napus HOM05D007923 ORTHO05D009651 1.4e-36 156.8 151 55.6
BcaC08g44686 Brassica carinata HOM05D007923 ORTHO05D009651 3.0e-36 155.6 88 80.7
Thhalv10022160m.g Eutrema salsugineum HOM05D007923 ORTHO05D009651 8.8e-36 154.1 154 52.6
BolC6t37406H Brassica oleracea HOM05D007923 ORTHO05D009651 5.7e-35 151.4 151 55.0
AL1G53940 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 4.7e-29 131.7 151 45.0
BcaB04g20407 Brassica carinata HOM05D007923 ORTHO05D009651 2.3e-28 129.4 117 53.8
CARHR179580 Cardamine hirsuta HOM05D007923 ORTHO05D009651 3.0e-28 129.0 140 47.9
Carub.0006s2829 Capsella rubella HOM05D007923 ORTHO05D009651 9.1e-25 117.5 135 43.0
AL9U10560 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 5.9e-24 114.8 147 44.9
AL5G13880 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 1.7e-23 113.2 151 42.4
AT4G13263 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 1.7e-23 113.2 147 44.9
AL5G13890 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 2.2e-23 112.8 151 41.7
AT4G13261 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 2.2e-23 112.8 147 43.5
AT2G04037 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 3.8e-23 112.1 141 44.0
AT5G35405 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 3.8e-23 112.1 131 47.3
AL5G13910 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 2.5e-22 109.4 144 42.4
C05p55900 Brassica napus HOM05D007923 ORTHO05D009651 3.2e-22 109.0 62 80.6
AT1G47450 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 1.2e-21 107.1 148 43.9
AL5G13870 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 2.3e-20 102.8 147 39.5
AL5G13900 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 1.5e-19 100.1 195 33.3
AT2G04031 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 2.8e-18 95.9 125 41.6
AT2G04041 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 1.2e-16 90.5 106 41.5
THA.LOC104799715 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 1.6e-16 90.1 122 35.2
BcaC08g44685 Brassica carinata HOM05D007923 ORTHO05D009651 2.9e-15 85.9 55 76.4
THA.LOC104810160 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 6.6e-15 84.7 126 38.1
BcaC09g48207 Brassica carinata HOM05D007923 ORTHO05D009651 1.9e-14 83.2 151 36.4
Carub.0001s4211 Capsella rubella HOM05D007923 ORTHO05D009651 1.4e-12 77.0 108 36.1
C05p55910 Brassica napus HOM05D007923 ORTHO05D009651 4.0e-12 75.5 53 69.8
BolC5t34259H Brassica oleracea HOM05D007923 ORTHO05D009651 4.0e-12 75.5 53 69.8
Thhalv10012072m.g Eutrema salsugineum HOM05D007923 ORTHO05D009651 4.9e-10 68.6 104 35.6
CARHR103140 Cardamine hirsuta HOM05D007923 ORTHO05D009651 8.3e-10 67.8 104 36.5
AL1G61300 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 1.4e-09 67.0 119 31.9
Sp1g39520 Schrenkiella parvula HOM05D007923 ORTHO05D009651 1.4e-09 67.0 112 33.0
CARHR043170 Cardamine hirsuta HOM05D007923 ORTHO05D009651 1.8e-09 66.6 104 32.7
AT1G52970 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 4.1e-09 65.5 112 30.4
Eucgr.C00224 Eucalyptus grandis HOM05D007923 ORTHO05D009651 1.6e-08 63.5 82 40.2
BcaC05g29303 Brassica carinata HOM05D007923 ORTHO05D009651 2.0e-08 63.2 36 83.3
THA.LOC104803521 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 4.6e-08 62.0 79 35.4
PGR031G1959 Punica granatum HOM05D007923 ORTHO05D009651 8.6e-07 57.8 102 32.4
RcHm_v2.0_Chr2g0133141 Rosa chinensis HOM05D012941 ORTHO05D009651 1.1e-06 57.4 81 30.9
Eucgr.C00225 Eucalyptus grandis HOM05D008402 ORTHO05D009651 5.6e-06 55.1 82 35.4


User provided reference genes

Program Settings