Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g29116 Brassica carinata HOM05D001035 ORTHO05D091628 6.3e-52 207.2 110 100.0
BcaC05g29113 Brassica carinata HOM05D001035 ORTHO05D001045 1.3e-28 129.8 73 97.3
C05p53420 Brassica napus HOM05D001035 ORTHO05D001045 1.3e-28 129.8 73 97.3
BolC5t34019H Brassica oleracea HOM05D001035 ORTHO05D001045 1.3e-28 129.8 73 97.3
A05p35240 Brassica napus HOM05D001035 ORTHO05D001045 6.4e-28 127.5 73 95.9
BraA05t22335Z Brassica rapa HOM05D001035 ORTHO05D001045 6.4e-28 127.5 73 95.9
BcaC05g29114 Brassica carinata HOM05D001035 ORTHO05D001045 3.2e-27 125.2 73 93.2
Thhalv10020086m.g Eutrema salsugineum HOM05D001035 ORTHO05D001045 3.6e-23 111.7 78 83.3
AL3G26470 Arabidopsis lyrata HOM05D001035 ORTHO05D001045 5.2e-22 107.8 78 80.8
Sp3g12480 Schrenkiella parvula HOM05D001035 ORTHO05D001045 2.0e-21 105.9 78 80.8
AT3G14205 Arabidopsis thaliana HOM05D001035 ORTHO05D001045 5.8e-21 104.4 78 79.5
Carub.0003s1388 Capsella rubella HOM05D001035 ORTHO05D001045 5.8e-21 104.4 78 79.5
CARHR089090 Cardamine hirsuta HOM05D001035 ORTHO05D001045 3.5e-18 95.1 78 71.8
A01p39480 Brassica napus HOM05D001035 ORTHO05D001045 4.6e-18 94.7 75 82.7
BraA01t03989Z Brassica rapa HOM05D001035 ORTHO05D001045 6.0e-18 94.4 75 78.7
BolC1t04994H Brassica oleracea HOM05D001035 ORTHO05D001045 7.8e-18 94.0 77 77.9
C01p50420 Brassica napus HOM05D001035 ORTHO05D001045 2.3e-17 92.4 77 76.6
A05p20330 Brassica napus HOM05D001035 ORTHO05D013385 3.0e-17 92.0 75 81.3
BcaC09g48388 Brassica carinata HOM05D001035 ORTHO05D001045 5.6e-16 87.8 78 75.6
Aa31LG8G1460 Aethionema arabicum HOM05D001035 ORTHO05D001045 3.5e-10 68.6 84 61.9
BcaC05g29117 Brassica carinata HOM05D001035 ORTHO05D001045 8.7e-09 63.9 73 57.5


User provided reference genes

Program Settings