Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g29022 Brassica carinata HOM05D004489 ORTHO05D010056 1.1e-153 547.0 351 100.0
C05p52380 Brassica napus HOM05D004489 ORTHO05D010056 7.3e-134 481.1 351 85.5
BcaC04g22095 Brassica carinata HOM05D004489 ORTHO05D000493 5.1e-111 405.2 350 78.6
C07p01860 Brassica napus HOM05D004489 ORTHO05D010056 1.6e-109 400.2 350 69.1
BolC7t40773H Brassica oleracea HOM05D004489 ORTHO05D010056 9.3e-105 384.4 350 66.3
C07p03810 Brassica napus HOM05D004489 ORTHO05D010056 7.8e-104 381.3 350 65.7
C09p41300 Brassica napus HOM05D004489 ORTHO05D010056 4.0e-100 369.0 350 70.0
BolC2t08562H Brassica oleracea HOM05D004489 ORTHO05D010056 9.0e-100 367.9 350 74.0
BolC9t55268H Brassica oleracea HOM05D004489 ORTHO05D010056 7.6e-99 364.8 350 64.6
BcaC08g45661 Brassica carinata HOM05D004489 ORTHO05D010056 7.1e-97 358.2 248 77.8
BcaC09g51560 Brassica carinata HOM05D004489 ORTHO05D010056 2.3e-95 353.2 337 61.4
BcaC04g20631 Brassica carinata HOM05D004489 ORTHO05D010056 1.5e-94 350.5 249 81.5
BcaC03g16680 Brassica carinata HOM05D004489 ORTHO05D010056 9.6e-94 347.8 250 77.6
C09p20870 Brassica napus HOM05D004489 ORTHO05D010056 4.8e-93 345.5 344 61.0
BolC9t54984H Brassica oleracea HOM05D004489 ORTHO05D010056 4.8e-93 345.5 344 61.0
BcaC07g37478 Brassica carinata HOM05D004489 ORTHO05D010056 1.4e-89 334.0 267 84.6
C07p23290 Brassica napus HOM05D004489 ORTHO05D010056 5.4e-89 332.0 350 58.3
BcaC07g38382 Brassica carinata HOM05D004489 ORTHO05D010056 5.6e-86 322.0 352 65.9
C01p35260 Brassica napus HOM05D004489 ORTHO05D010056 4.5e-83 312.4 256 71.5
BolC1t03483H Brassica oleracea HOM05D004489 ORTHO05D010056 4.5e-83 312.4 256 73.4
BolC7t42863H Brassica oleracea HOM05D004489 ORTHO05D010056 4.5e-83 312.4 350 60.0
C02p47420 Brassica napus HOM05D004489 ORTHO05D010056 1.2e-80 304.3 221 81.0
BcaC04g22309 Brassica carinata HOM05D004489 ORTHO05D010056 8.7e-79 298.1 278 61.5
BcaC07g37389 Brassica carinata HOM05D004489 ORTHO05D010056 5.7e-78 295.4 343 55.4
BcaC01g01829 Brassica carinata HOM05D004489 ORTHO05D010056 2.1e-77 293.5 208 78.8
A06p23470 Brassica napus HOM05D004489 ORTHO05D010056 6.2e-77 292.0 255 67.1
C08p08580 Brassica napus HOM05D004489 ORTHO05D010056 5.3e-76 288.9 342 55.0
BcaC03g14954 Brassica carinata HOM05D004489 ORTHO05D010056 6.9e-76 288.5 208 81.7
C03p64090 Brassica napus HOM05D004489 ORTHO05D010056 1.5e-75 287.3 250 72.0
BolC3t18663H Brassica oleracea HOM05D004489 ORTHO05D010056 5.8e-75 285.4 250 71.6
C09p34080 Brassica napus HOM05D004489 ORTHO05D010056 2.9e-74 283.1 256 71.5
BcaNung03342 Brassica carinata HOM05D004489 ORTHO05D010056 1.4e-73 280.8 206 75.2
BolC9t56245H Brassica oleracea HOM05D004489 ORTHO05D010056 1.9e-73 280.4 256 71.1
BcaC02g11524 Brassica carinata HOM05D004489 ORTHO05D010056 2.5e-73 280.0 309 54.4
BcaC04g20751 Brassica carinata HOM05D004489 ORTHO05D010056 1.6e-72 277.3 234 70.5
BcaC05g28262 Brassica carinata HOM05D004489 ORTHO05D010056 2.7e-72 276.6 245 70.2
BolC8t47699H Brassica oleracea HOM05D004489 ORTHO05D010056 1.8e-71 273.9 254 65.0
BcaC02g10072 Brassica carinata HOM05D004489 ORTHO05D090663 4.3e-70 269.2 333 67.6
BcaC02g07770 Brassica carinata HOM05D004489 ORTHO05D010056 5.7e-70 268.9 187 79.1
C06p10210 Brassica napus HOM05D004489 ORTHO05D010056 9.7e-70 268.1 223 70.4
C02p24700 Brassica napus HOM05D004489 ORTHO05D098125 1.1e-68 264.6 249 67.5
C01p35220 Brassica napus HOM05D004489 ORTHO05D010056 3.8e-66 256.1 217 73.3
BcaC01g00378 Brassica carinata HOM05D004489 ORTHO05D010056 3.2e-65 253.1 226 70.8
BolC8t49437H Brassica oleracea HOM05D004489 ORTHO05D021897 3.9e-63 246.1 333 60.4
C08p18050 Brassica napus HOM05D004489 ORTHO05D021897 2.0e-62 243.8 333 60.7
C09p39590 Brassica napus HOM05D004489 ORTHO05D010056 5.9e-59 232.3 344 54.9
BolC5t31966H Brassica oleracea HOM05D004489 ORTHO05D018788 7.7e-59 231.9 342 47.1
C02p57490 Brassica napus HOM05D004489 ORTHO05D010056 2.2e-58 230.3 256 63.3
BcaC09g51020 Brassica carinata HOM05D004489 ORTHO05D010056 1.9e-57 227.3 152 77.6
BcaC04g18700 Brassica carinata HOM05D004489 ORTHO05D010056 5.5e-57 225.7 276 51.8
BolC8t47151H Brassica oleracea HOM05D004489 ORTHO05D010056 7.2e-57 225.3 182 69.8
C01p30160 Brassica napus HOM05D004489 ORTHO05D010056 1.6e-56 224.2 256 61.3
BolC9t58376H Brassica oleracea HOM05D004489 ORTHO05D018788 1.4e-55 221.1 357 46.8
BcaC06g36646 Brassica carinata HOM05D004489 ORTHO05D010056 1.8e-55 220.7 129 87.6
C05p26780 Brassica napus HOM05D004489 ORTHO05D010056 3.9e-55 219.5 196 71.4
BcaC03g15256 Brassica carinata HOM05D004489 ORTHO05D010056 8.8e-55 218.4 175 71.4
C05p22010 Brassica napus HOM05D004489 ORTHO05D010056 7.4e-54 215.3 178 74.7
BcaC07g38503 Brassica carinata HOM05D004489 ORTHO05D010056 9.7e-54 214.9 175 70.9
C02p21030 Brassica napus HOM05D004489 ORTHO05D010056 8.2e-53 211.8 220 64.1
BolC1t01193H Brassica oleracea HOM05D004489 ORTHO05D010056 1.4e-52 211.1 134 81.3
C07p20720 Brassica napus HOM05D004489 ORTHO05D010056 5.9e-51 205.7 173 68.8
BcaC06g36060 Brassica carinata HOM05D004489 ORTHO05D092528 3.8e-50 203.0 214 57.5
BolC5t30898H Brassica oleracea HOM05D004489 ORTHO05D010056 1.5e-49 201.1 179 70.9
BolC7t42604H Brassica oleracea HOM05D004489 ORTHO05D010056 1.5e-49 201.1 250 58.8
BraA06t25443Z Brassica rapa HOM05D004489 ORTHO05D010056 3.2e-49 199.9 169 75.1
C06p25970 Brassica napus HOM05D004489 ORTHO05D021897 8.8e-47 191.8 333 53.2
BolC4t27228H Brassica oleracea HOM05D004489 ORTHO05D018788 3.3e-46 189.9 312 45.5
C08p11390 Brassica napus HOM05D004489 ORTHO05D010056 2.2e-45 187.2 143 72.0
C01p27340 Brassica napus HOM05D004489 ORTHO05D010056 6.3e-45 185.7 143 70.6
A01p28040 Brassica napus HOM05D004489 ORTHO05D018788 2.4e-44 183.7 323 42.1
C01p50400 Brassica napus HOM05D004489 ORTHO05D010056 3.1e-44 183.3 143 76.9
BraA07t28336Z Brassica rapa HOM05D004489 ORTHO05D018788 7.0e-44 182.2 323 42.4
C09p37510 Brassica napus HOM05D004489 ORTHO05D032456 7.7e-43 178.7 263 47.9
BolC9t56581H Brassica oleracea HOM05D004489 ORTHO05D032456 7.7e-43 178.7 263 47.9
A07p11790 Brassica napus HOM05D004489 ORTHO05D010056 5.0e-42 176.0 254 54.7
BcaB06g26545 Brassica carinata HOM05D004489 ORTHO05D095075 1.1e-41 174.9 234 51.3
BcaB02g10531 Brassica carinata HOM05D004489 ORTHO05D094500 1.5e-41 174.5 225 50.7
BcaC04g20961 Brassica carinata HOM05D004489 ORTHO05D032456 3.2e-41 173.3 141 67.4
BcaB08g35381 Brassica carinata HOM05D004489 ORTHO05D091739 4.2e-41 172.9 356 39.9
BraA04t16648Z Brassica rapa HOM05D004489 ORTHO05D018788 4.2e-41 172.9 218 53.7
BraA02t07746Z Brassica rapa HOM05D004489 ORTHO05D018788 1.2e-40 171.4 320 42.2
BolC6t37769H Brassica oleracea HOM05D004489 ORTHO05D010056 1.6e-40 171.0 143 76.2
A05p21690 Brassica napus HOM05D004489 ORTHO05D100974 3.6e-40 169.9 181 59.7
BraA07t28964Z Brassica rapa HOM05D004489 ORTHO05D010056 1.0e-39 168.3 264 52.7
C07p01280 Brassica napus HOM05D004489 ORTHO05D098218 2.0e-38 164.1 356 49.7
BolC2t08244H Brassica oleracea HOM05D004489 ORTHO05D010056 4.4e-38 162.9 142 73.9
BcaC09g48389 Brassica carinata HOM05D004489 ORTHO05D010056 5.7e-38 162.5 128 70.3
C07p01700 Brassica napus HOM05D004489 ORTHO05D010056 1.3e-37 161.4 174 66.1
BcaC05g26196 Brassica carinata HOM05D004489 ORTHO05D010056 1.4e-36 157.9 120 73.3
BcaC08g44976 Brassica carinata HOM05D004489 ORTHO05D010056 1.4e-36 157.9 130 70.8
C07p01670 Brassica napus HOM05D008277 ORTHO05D018788 2.4e-36 157.1 219 48.4
BcaB04g17396 Brassica carinata HOM05D004489 ORTHO05D095687 5.4e-36 156.0 203 48.8
BcaC04g19493 Brassica carinata HOM05D004489 ORTHO05D010056 1.0e-34 151.8 174 56.9
BraA05t20820Z Brassica rapa HOM05D004489 ORTHO05D027759 2.9e-34 150.2 115 71.3
BolC2t10703H Brassica oleracea HOM05D004489 ORTHO05D027759 6.5e-34 149.1 203 46.8
BcaB01g01214 Brassica carinata HOM05D004489 ORTHO05D000740 1.9e-33 147.5 251 45.8
BcaB07g33397 Brassica carinata HOM05D004489 ORTHO05D000740 9.4e-33 145.2 251 46.2
A05p19170 Brassica napus HOM05D004489 ORTHO05D027759 1.2e-32 144.8 115 68.7
BcaC03g16777 Brassica carinata HOM05D004489 ORTHO05D027759 3.6e-32 143.3 198 46.5
C09p55140 Brassica napus HOM05D004489 ORTHO05D010056 4.7e-32 142.9 133 72.9
BcaB01g01689 Brassica carinata HOM05D004489 ORTHO05D095684 1.4e-31 141.4 153 55.6
C06p26040 Brassica napus HOM05D004489 ORTHO05D010056 2.3e-31 140.6 186 57.0
BcaC03g17739 Brassica carinata HOM05D004489 ORTHO05D010056 8.8e-31 138.7 98 75.5
A04p09860 Brassica napus HOM05D004489 ORTHO05D010056 8.8e-31 138.7 125 70.4
BcaB03g16202 Brassica carinata HOM05D004489 ORTHO05D093905 3.7e-29 133.3 134 58.2
BcaB06g27095 Brassica carinata HOM05D004489 ORTHO05D095035 4.9e-29 132.9 295 43.7
BraA05t21099Z Brassica rapa HOM05D004489 ORTHO05D027587 1.4e-28 131.3 138 58.0
BolC9t55309H Brassica oleracea HOM05D004489 ORTHO05D027587 1.8e-28 131.0 144 59.7
A01p27750 Brassica napus HOM05D004489 ORTHO05D000199 1.3e-26 124.8 347 42.4
BcaB03g16455 Brassica carinata HOM05D004489 ORTHO05D005643 1.7e-26 124.4 225 43.6
BcaC04g22067 Brassica carinata HOM05D004489 ORTHO05D027587 5.0e-26 122.9 118 65.3
BcaB03g16167 Brassica carinata HOM05D004489 ORTHO05D091635 7.2e-25 119.0 225 42.7
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 1.6e-24 117.9 270 48.5
BraA09t38666Z Brassica rapa HOM05D004489 ORTHO05D010056 1.6e-24 117.9 116 61.2
BcaC04g22798 Brassica carinata HOM05D004489 ORTHO05D010056 1.8e-23 114.4 337 45.1
BcaB05g23045 Brassica carinata HOM05D008277 ORTHO05D093753 1.2e-22 111.7 166 50.0
BcaB05g24918 Brassica carinata HOM05D004489 ORTHO05D092070 1.5e-22 111.3 220 39.5
BcaB07g33270 Brassica carinata HOM05D000888 ORTHO05D000740 2.0e-22 110.9 202 42.6
BcaC05g26627 Brassica carinata HOM05D004489 ORTHO05D010056 3.4e-22 110.2 78 73.1
A05p21780 Brassica napus HOM05D004489 ORTHO05D027587 3.4e-22 110.2 102 62.7
BcaB01g01502 Brassica carinata HOM05D004489 ORTHO05D094885 4.4e-22 109.8 152 48.0
BcaC08g44969 Brassica carinata HOM05D004489 ORTHO05D010056 5.7e-22 109.4 160 45.6
BcaNung05365 Brassica carinata HOM05D004489 ORTHO05D094850 3.7e-21 106.7 60 88.3
BcaB02g11425 Brassica carinata HOM05D000888 ORTHO05D000740 1.1e-20 105.1 251 39.0
BcaB04g17006 Brassica carinata HOM05D004489 ORTHO05D092589 3.2e-20 103.6 152 48.7
BcaC01g03828 Brassica carinata HOM05D004489 ORTHO05D010056 3.9e-18 96.7 74 68.9
BcaB02g06508 Brassica carinata HOM05D004489 ORTHO05D094292 6.2e-16 89.4 205 37.6
BcaB03g16158 Brassica carinata HOM05D004489 ORTHO05D091594 6.2e-16 89.4 102 54.9
A05p21970 Brassica napus HOM05D010967 ORTHO05D028117 6.8e-15 85.9 143 46.2
BcaC01g02601 Brassica carinata HOM05D004489 ORTHO05D093224 8.9e-15 85.5 78 64.1
BraA01t03541Z Brassica rapa HOM05D010967 ORTHO05D028117 2.6e-14 84.0 124 50.0
BolC3t17100H Brassica oleracea HOM05D004489 ORTHO05D042334 3.4e-14 83.6 66 69.7
BraA09t38594Z Brassica rapa HOM05D010967 ORTHO05D028117 5.8e-14 82.8 124 49.2
A03p48290 Brassica napus HOM05D010967 ORTHO05D028117 1.7e-13 81.3 123 48.8
BcaB04g18048 Brassica carinata HOM05D004489 ORTHO05D091089 2.2e-13 80.9 78 59.0
BcaB08g35275 Brassica carinata HOM05D004489 ORTHO05D093088 3.7e-13 80.1 150 42.0
BcaB04g17769 Brassica carinata HOM05D004489 ORTHO05D096269 1.9e-12 77.8 158 39.9
A04p09850 Brassica napus HOM05D004489 ORTHO05D042334 2.4e-12 77.4 66 65.2
BolC1t03480H Brassica oleracea HOM05D004489 ORTHO05D033093 4.1e-12 76.6 53 77.4
BcaB08g35162 Brassica carinata HOM05D000888 ORTHO05D000740 9.2e-12 75.5 205 33.7
BraA01t02558Z Brassica rapa HOM05D010967 ORTHO05D108345 1.2e-11 75.1 117 47.9
C05p32350 Brassica napus HOM05D004489 ORTHO05D033093 3.5e-11 73.6 55 70.9
BolC6t37761H Brassica oleracea HOM05D004489 ORTHO05D104721 6.0e-11 72.8 151 38.4
BcaB04g17639 Brassica carinata HOM05D008277 ORTHO05D011446 4.3e-09 66.6 74 54.1
A05p23080 Brassica napus HOM05D010967 ORTHO05D017683 5.6e-09 66.2 92 48.9
A01p19980 Brassica napus HOM05D010967 ORTHO05D017683 1.6e-08 64.7 92 47.8
BraA01t02827Z Brassica rapa HOM05D010967 ORTHO05D017683 1.6e-08 64.7 92 47.8
A09p35600 Brassica napus HOM05D010967 ORTHO05D017683 2.1e-08 64.3 92 47.8
A01p34440 Brassica napus HOM05D010967 ORTHO05D017683 3.6e-08 63.5 92 47.8
A05p17100 Brassica napus HOM05D010967 ORTHO05D017683 3.6e-08 63.5 92 47.8
A09p48280 Brassica napus HOM05D010967 ORTHO05D017683 3.6e-08 63.5 92 47.8
BraA05t21163Z Brassica rapa HOM05D010967 ORTHO05D108496 3.6e-08 63.5 71 56.3
C04p13490 Brassica napus HOM05D008277 ORTHO05D100146 4.7e-08 63.2 245 29.8
A06p28060 Brassica napus HOM05D010967 ORTHO05D017683 1.8e-07 61.2 88 44.3
BraA05t21091Z Brassica rapa HOM05D004489 ORTHO05D033093 1.8e-07 61.2 56 66.1
A05p23320 Brassica napus HOM05D008277 ORTHO05D000199 4.0e-07 60.1 245 29.4
BraA02t08312Z Brassica rapa HOM05D010967 ORTHO05D108770 6.8e-07 59.3 70 54.3
BraA05t21197Z Brassica rapa HOM05D008277 ORTHO05D016104 8.9e-07 58.9 242 30.2
A03p58810 Brassica napus HOM05D010967 ORTHO05D017683 2.0e-06 57.8 87 44.8
A03p68630 Brassica napus HOM05D008277 ORTHO05D100657 4.4e-06 56.6 130 36.9
A05p29410 Brassica napus HOM05D008277 ORTHO05D016104 7.5e-06 55.8 108 39.8
BraA07t28506Z Brassica rapa HOM05D010967 ORTHO05D108156 9.8e-06 55.5 89 42.7


User provided reference genes

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