Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g28982 Brassica carinata HOM05D005118 ORTHO05D006038 1.0e-123 446.8 231 100.0
BolC5t33871H Brassica oleracea HOM05D005118 ORTHO05D006038 1.3e-94 350.1 237 80.2
C05p51840 Brassica napus HOM05D005118 ORTHO05D006038 6.1e-89 331.3 224 79.9
BcaB06g29561 Brassica carinata HOM05D005118 ORTHO05D006038 6.5e-83 311.2 213 80.3
Sp3g13570 Schrenkiella parvula HOM05D005118 ORTHO05D006038 1.5e-71 273.5 249 65.1
Thhalv10021266m.g Eutrema salsugineum HOM05D005118 ORTHO05D006038 1.3e-70 270.4 248 63.7
BraA05t22230Z Brassica rapa HOM05D005118 ORTHO05D006038 3.2e-53 212.6 173 69.4
CARHR145210 Cardamine hirsuta HOM05D005118 ORTHO05D006038 4.6e-52 208.8 250 53.6
AL3G23010 Arabidopsis lyrata HOM05D005118 ORTHO05D006038 1.5e-50 203.8 253 52.6
BraA05t22581Z Brassica rapa HOM05D005118 ORTHO05D006038 1.9e-50 203.4 261 51.0
A05p37870 Brassica napus HOM05D005118 ORTHO05D006038 2.5e-50 203.0 264 50.8
Sp3g09700 Schrenkiella parvula HOM05D005118 ORTHO05D006038 4.3e-50 202.2 269 49.4
BcaB06g25621 Brassica carinata HOM05D005118 ORTHO05D006038 7.3e-50 201.4 258 51.2
C05p56660 Brassica napus HOM05D005118 ORTHO05D006038 9.5e-50 201.1 261 49.4
BolC5t34331H Brassica oleracea HOM05D005118 ORTHO05D006038 9.5e-50 201.1 261 49.4
Carub.0005s0168 Capsella rubella HOM05D005118 ORTHO05D006038 9.5e-50 201.1 255 51.4
BcaC05g29371 Brassica carinata HOM05D005118 ORTHO05D006038 2.8e-49 199.5 245 50.6
Thhalv10018973m.g Eutrema salsugineum HOM05D005118 ORTHO05D006038 4.7e-49 198.7 249 51.8
Aa31LG3G4830 Aethionema arabicum HOM05D005118 ORTHO05D006038 1.1e-48 197.6 265 48.3
Aa31LG3G4790 Aethionema arabicum HOM05D005118 ORTHO05D006038 4.0e-48 195.7 267 47.6
AT3G11470 Arabidopsis thaliana HOM05D005118 ORTHO05D006038 1.9e-42 176.8 243 48.1
Hund01804 Selenicereus undatus HOM05D005118 ORTHO05D006038 6.2e-41 171.8 216 48.6
MD12G1027200 Malus domestica HOM05D005118 ORTHO05D006038 8.1e-41 171.4 254 43.3
TPR.G2549 Trifolium pratense HOM05D005118 ORTHO05D006038 6.9e-40 168.3 255 43.9
Psat6g079520 Pisum sativum HOM05D005118 ORTHO05D006038 4.4e-39 165.6 255 42.4
Prupe.7G104300 Prunus persica HOM05D005118 ORTHO05D006038 5.8e-39 165.2 266 41.7
Medtr8g095460 Medicago truncatula HOM05D005118 ORTHO05D006038 4.9e-38 162.2 252 43.3
Sabra06G0162900 Salix brachista HOM05D005118 ORTHO05D006038 4.9e-38 162.2 255 41.6
Medtr1g059790 Medicago truncatula HOM05D005118 ORTHO05D006038 8.4e-38 161.4 254 41.7
THA.LOC104816589 Tarenaya hassleriana HOM05D005118 ORTHO05D006038 8.4e-38 161.4 240 45.8
Dinv21195 Davidia involucrata HOM05D005118 ORTHO05D006038 3.2e-37 159.5 238 44.1
Gohir.D01G195000 Gossypium hirsutum HOM05D005118 ORTHO05D006038 3.2e-37 159.5 271 39.5
Atru.chr8.1769 Acer truncatum HOM05D005118 ORTHO05D006038 4.2e-37 159.1 276 39.1
Gorai.002G239100 Gossypium raimondii HOM05D005118 ORTHO05D006038 4.2e-37 159.1 271 39.5
AL5G11970 Arabidopsis lyrata HOM05D005118 ORTHO05D006038 5.4e-37 158.7 199 50.8
DCAR_013399 Daucus carota HOM05D005118 ORTHO05D006038 9.3e-37 157.9 260 41.5
GSVIVG01016776001 Vitis vinifera HOM05D005118 ORTHO05D006038 2.7e-36 156.4 268 41.0
Sc02g0000340 Simmondsia chinensis HOM05D005118 ORTHO05D006038 3.5e-36 156.0 262 41.6
Ah.08g210500 Amaranthus hybridus HOM05D000892 ORTHO05D009371 4.6e-36 155.6 217 45.2
Ca_00895_v3 Cicer arietinum L. HOM05D005118 ORTHO05D006038 4.6e-36 155.6 252 40.1
Lalb_Chr10g0096391 Lupinus albus HOM05D005118 ORTHO05D006038 4.6e-36 155.6 251 42.2
COL.COLO4_29702 Corchorus olitorius HOM05D005118 ORTHO05D006038 7.8e-36 154.8 257 40.5
Glyma.13G154600 Glycine max HOM05D005118 ORTHO05D006038 7.8e-36 154.8 257 40.9
Gohir.A01G205500 Gossypium hirsutum HOM05D005118 ORTHO05D006038 7.8e-36 154.8 271 38.4
arahy.Tifrunner.gnm1.ann1.72V09J Arachis hypogaea HOM05D005118 ORTHO05D006038 1.7e-35 153.7 257 40.9
arahy.Tifrunner.gnm1.ann1.W1QNQS Arachis hypogaea HOM05D005118 ORTHO05D006038 1.7e-35 153.7 257 40.9
CsaV3_6G003860 Cucumis sativus L. HOM05D005118 ORTHO05D006038 1.7e-35 153.7 248 39.5
TAR365G0960 Trochodendron aralioides HOM05D005118 ORTHO05D006038 1.7e-35 153.7 266 40.6
Ciclev10011946m.g Citrus clementina HOM05D005118 ORTHO05D006038 2.3e-35 153.3 295 37.6
Nn2g14484 Nelumbo nucifera HOM05D005118 ORTHO05D006038 2.3e-35 153.3 255 41.6
Lj5g0005733 Lotus japonicus HOM05D005118 ORTHO05D006038 3.9e-35 152.5 253 40.3
Phvul.007G152100 Phaseolus vulgaris HOM05D005118 ORTHO05D006038 3.9e-35 152.5 242 40.9
PGR004G0063 Punica granatum HOM05D005118 ORTHO05D006038 3.9e-35 152.5 235 43.8
Oeu056875.2 Olea europaea HOM05D005118 ORTHO05D006038 5.1e-35 152.1 256 40.6
ATR0618G287 Amborella trichopoda HOM05D005118 ORTHO05D006038 6.6e-35 151.8 240 40.8
Migut.J01020 Erythranthe guttata HOM05D005118 ORTHO05D006038 6.6e-35 151.8 245 40.8
FAN02G2546 Fragaria x ananassa HOM05D005118 ORTHO05D006038 6.6e-35 151.8 250 40.0
MBI14_g17373_MAGBIO Magnolia biondii HOM05D005118 ORTHO05D006038 6.6e-35 151.8 294 37.4
MELO3C011647.2 Cucumis melo HOM05D005118 ORTHO05D006038 8.7e-35 151.4 246 40.2
FvH4_6g19140 Fragaria vesca HOM05D005118 ORTHO05D006038 8.7e-35 151.4 250 41.2
FAN05G3536 Fragaria x ananassa HOM05D005118 ORTHO05D006038 8.7e-35 151.4 250 40.4
FAN14G1754 Fragaria x ananassa HOM05D005118 ORTHO05D006038 8.7e-35 151.4 250 41.2
CANSAT64G1535 Cannabis sativa HOM05D005118 ORTHO05D006038 1.1e-34 151.0 279 39.4
FAN09G1525 Fragaria x ananassa HOM05D005118 ORTHO05D006038 1.5e-34 150.6 250 40.0
Rhsim03G0072700 Rhododendron simsii HOM05D005118 ORTHO05D006038 1.5e-34 150.6 271 38.0
CSS0000835 Camellia sinensis var. sinensis HOM05D005118 ORTHO05D006038 2.5e-34 149.8 256 40.2
VMungo1309G0892 Vigna mungo HOM05D005118 ORTHO05D006038 2.5e-34 149.8 255 38.4
AT2G02765 Arabidopsis thaliana HOM05D005118 ORTHO05D006038 3.3e-34 149.4 197 49.2
ClCG08G004490 Citrullus lanatus HOM05D005118 ORTHO05D006038 3.3e-34 149.4 248 39.5
SalBow3G3316 Salvia bowleyana HOM05D005118 ORTHO05D006038 3.3e-34 149.4 258 38.0
RcHm_v2.0_Chr3g0474251 Rosa chinensis HOM05D005118 ORTHO05D006038 4.3e-34 149.1 252 40.1
TWI77G0553 Tripterygium wilfordii HOM05D005118 ORTHO05D006038 4.3e-34 149.1 260 40.0
Aqoxy3G03420 Aquilegia oxysepala HOM05D005118 ORTHO05D006038 9.6e-34 147.9 252 39.3
Lsat_1_v5_gn_9_20681 Lactuca sativa HOM05D005118 ORTHO05D006038 9.6e-34 147.9 239 41.8
Peaxi162Scf00102g00213 Petunia axillaris HOM05D005118 ORTHO05D006038 9.6e-34 147.9 259 40.5
AUR62006198 Chenopodium quinoa HOM05D005118 ORTHO05D006038 1.3e-33 147.5 263 39.2
Atru.chr8.1478 Acer truncatum HOM05D005118 ORTHO05D006038 1.6e-33 147.1 267 37.5
PSO063G5626 Papaver somniferum HOM05D005118 ORTHO05D006038 1.6e-33 147.1 250 42.4
QL05p009399 Quercus lobata HOM05D005118 ORTHO05D006038 1.6e-33 147.1 270 38.1
Zm00001eb000710 Zea mays HOM05D005118 ORTHO05D006038 1.6e-33 147.1 267 37.1
CiPaw.09G015400 Carya illinoinensis HOM05D005118 ORTHO05D006038 2.1e-33 146.7 250 40.8
TWI53G1403 Tripterygium wilfordii HOM05D005118 ORTHO05D006038 2.1e-33 146.7 255 39.6
HanXRQChr08g0212801 Helianthus annuus HOM05D005118 ORTHO05D006038 2.8e-33 146.4 250 40.4
PSO782G2273 Papaver somniferum HOM05D005118 ORTHO05D006038 2.8e-33 146.4 250 41.6
Solyc09g009960.3 Solanum lycopersicum HOM05D005118 ORTHO05D006038 2.8e-33 146.4 256 38.7
Sopen09g004710 Solanum pennellii HOM05D005118 ORTHO05D006038 2.8e-33 146.4 256 38.7
Sed0011362 Sechium edule HOM05D005118 ORTHO05D006038 4.8e-33 145.6 249 39.4
Thecc.05G091100 Theobroma cacao HOM05D005118 ORTHO05D006038 4.8e-33 145.6 271 38.7
CAN.G397.66 Capsicum annuum HOM05D005118 ORTHO05D006038 8.1e-33 144.8 256 38.3
EL10Ac7g16902 Beta vulgaris HOM05D001354 ORTHO05D007486 3.1e-32 142.9 251 39.8
Lj6g0000791 Lotus japonicus HOM05D005118 ORTHO05D006038 3.1e-32 142.9 250 38.8
Lj6g0018590 Lotus japonicus HOM05D005118 ORTHO05D006038 3.1e-32 142.9 250 38.8
ECA247G3083 Erigeron canadensis HOM05D005118 ORTHO05D006038 5.3e-32 142.1 245 38.8
Os08g0243100 Oryza sativa ssp. japonica HOM05D005118 ORTHO05D006038 5.3e-32 142.1 247 37.7
Eucgr.A02654 Eucalyptus grandis HOM05D005118 ORTHO05D006038 6.9e-32 141.7 271 36.5
HPP92_018124 Vanilla planifolia HOM05D005118 ORTHO05D006038 9.0e-32 141.4 224 40.2
Oeu017686.1 Olea europaea HOM05D005118 ORTHO05D006038 2.6e-31 139.8 252 39.7
Duzib093G2169 Durio zibethinus HOM05D005118 ORTHO05D006038 3.4e-31 139.4 165 46.7
vmacro07419 Vaccinium macrocarpon HOM05D005118 ORTHO05D006038 3.4e-31 139.4 290 35.9
Lj6g0005905 Lotus japonicus HOM05D005118 ORTHO05D006038 1.7e-30 137.1 253 38.3
Lj2C139G10 Lonicera japonica HOM05D005118 ORTHO05D006038 2.2e-30 136.7 165 47.9
Sabra16G0082800 Salix brachista HOM05D005118 ORTHO05D006038 2.2e-30 136.7 159 49.7
HPP92_018147 Vanilla planifolia HOM05D005118 ORTHO05D006038 2.2e-30 136.7 159 49.1
Nitab4.5_0001933g0040 Nicotiana tabacum HOM05D005118 ORTHO05D006038 2.9e-30 136.3 259 37.8
Cpa.g.sc5.3 Carica papaya HOM05D005118 ORTHO05D006038 4.9e-30 135.6 165 47.9
AUR62037021 Chenopodium quinoa HOM05D005118 ORTHO05D006038 8.4e-30 134.8 253 37.5
Potri.006G211300 Populus trichocarpa HOM05D005118 ORTHO05D006038 5.4e-29 132.1 168 46.4
Potri.016G078400 Populus trichocarpa HOM05D005118 ORTHO05D006038 1.6e-28 130.6 141 48.2
VMungo0720G2492 Vigna mungo HOM05D005118 ORTHO05D006038 1.6e-28 130.6 160 45.0
Rhsim03G0074200 Rhododendron simsii HOM05D005118 ORTHO05D006038 2.7e-28 129.8 241 39.0
Cc06_g05990 Coffea canephora HOM05D005118 ORTHO05D006038 7.9e-28 128.3 164 43.3
SGA_v2.0_scaffold31G12903 Striga asiatica HOM05D005118 ORTHO05D006038 3.0e-27 126.3 165 44.2
unitig_748.g8118 Utricularia gibba HOM05D005118 ORTHO05D006038 3.0e-27 126.3 252 33.3
Haze_12101 Corylus avellana HOM05D005118 ORTHO05D006038 9.0e-24 114.8 220 35.5
AUR62017509 Chenopodium quinoa HOM05D005118 ORTHO05D006038 9.9e-23 111.3 248 35.9
Peaxi162Scf00096g00416 Petunia axillaris HOM05D005118 ORTHO05D006038 9.9e-23 111.3 233 35.6
Rhsim03G0072000 Rhododendron simsii HOM05D005118 ORTHO05D006038 9.9e-23 111.3 190 36.8
SEGI_18237 Sequoiadendron giganteum HOM05D005118 ORTHO05D006038 1.4e-21 107.5 284 32.0
Dinv21192 Davidia involucrata HOM05D005118 ORTHO05D006038 4.6e-20 102.4 228 35.1
SMO118G0036 Selaginella moellendorffii HOM05D005118 ORTHO05D006038 1.0e-19 101.3 243 31.7
SMO144G0078 Selaginella moellendorffii HOM05D005118 ORTHO05D006038 1.0e-19 101.3 243 30.9
CARHR086010 Cardamine hirsuta HOM05D005118 ORTHO05D006038 3.3e-18 96.3 107 56.1
A05p34090 Brassica napus HOM05D005118 ORTHO05D006038 4.8e-17 92.4 53 86.8
Sabra06G0126100 Salix brachista HOM05D005118 ORTHO05D006038 6.2e-17 92.0 129 45.0
Nitab4.5_0012129g0010 Nicotiana tabacum HOM05D005118 ORTHO05D006038 1.8e-16 90.5 233 33.9
Pp3c5_18920 Physcomitrium patens HOM05D005118 ORTHO05D006038 1.8e-16 90.5 248 31.0
Manes.08G026600 Manihot esculenta HOM05D005118 ORTHO05D006038 4.0e-16 89.4 236 33.9
Mapoly0006s0252 Marchantia polymorpha HOM05D005118 ORTHO05D006038 9.0e-16 88.2 249 29.7
Carub.0003s1079 Capsella rubella HOM05D005118 ORTHO05D006038 3.4e-15 86.3 100 55.0
PRCOL_00003909 Prasinoderma coloniale HOM05D005118 ORTHO05D006038 1.3e-14 84.3 123 39.0
Glyma.10G074300 Glycine max HOM05D005118 ORTHO05D006038 2.2e-14 83.6 120 40.8
AagrBONN_evm.TU.Sc2ySwM_340.158 Anthoceros agrestis HOM05D005118 ORTHO05D006038 1.2e-12 77.8 157 36.3
MCO02G431 Micromonas commoda HOM05D005118 ORTHO05D006038 4.6e-12 75.9 167 32.9
TPR.G14778 Trifolium pratense HOM05D005118 ORTHO05D006038 2.3e-11 73.6 157 32.5
CBR_g30340 Chara braunii HOM05D005118 ORTHO05D006038 1.1e-10 71.2 141 37.6
FvH4_4g11630 Fragaria vesca HOM05D005118 ORTHO05D006038 3.7e-09 66.2 74 50.0
MD14G1027400 Malus domestica HOM05D005118 ORTHO05D006038 3.7e-09 66.2 85 43.5
CDE02G4411 Ceratophyllum demersum HOM05D000588 ORTHO05D000637 8.2e-09 65.1 107 43.0
FAN12G1659 Fragaria x ananassa HOM05D005118 ORTHO05D006038 6.9e-08 62.0 53 56.6
Cre01.g018500 Chlamydomonas reinhardtii HOM05D005118 ORTHO05D006038 1.5e-07 60.8 89 43.8


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