Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g28880 Brassica carinata HOM05D003348 ORTHO05D010016 5.9e-121 437.6 225 100.0
BcaC02g11615 Brassica carinata HOM05D003348 ORTHO05D010016 1.3e-91 340.1 355 58.0
C09p43770 Brassica napus HOM05D003348 ORTHO05D010016 2.2e-83 312.8 181 89.5
C04p13150 Brassica napus HOM05D003348 ORTHO05D010016 1.1e-82 310.5 181 89.0
BcaC06g36007 Brassica carinata HOM05D003348 ORTHO05D010016 5.4e-82 308.1 273 64.5
BcaC04g20417 Brassica carinata HOM05D003348 ORTHO05D010016 7.1e-82 307.8 181 88.4
C05p18920 Brassica napus HOM05D003348 ORTHO05D010016 7.1e-82 307.8 237 72.2
BolC9t57261H Brassica oleracea HOM05D003348 ORTHO05D010016 7.1e-82 307.8 181 88.4
BcaC07g37267 Brassica carinata HOM05D003348 ORTHO05D010016 2.1e-81 306.2 252 67.5
BolC6t38448H Brassica oleracea HOM05D003348 ORTHO05D010016 1.1e-79 300.4 181 86.7
C07p09080 Brassica napus HOM05D003348 ORTHO05D010016 2.5e-79 299.3 188 83.5
BolC7t41316H Brassica oleracea HOM05D003348 ORTHO05D010016 9.5e-79 297.4 188 83.0
BolC7t40801H Brassica oleracea HOM05D003348 ORTHO05D010016 4.7e-78 295.0 333 54.7
BcaC06g36451 Brassica carinata HOM05D003348 ORTHO05D010016 7.1e-74 281.2 277 59.9
BraA03t15649Z Brassica rapa HOM05D003348 ORTHO05D010016 2.7e-73 279.3 181 82.9
A01p32750 Brassica napus HOM05D003348 ORTHO05D010016 2.1e-70 269.6 159 87.4
BcaB07g33116 Brassica carinata HOM05D003348 ORTHO05D010016 2.8e-70 269.2 181 75.1
BolC8t47537H Brassica oleracea HOM05D003348 ORTHO05D010016 3.1e-69 265.8 308 55.2
A02p04450 Brassica napus HOM05D003348 ORTHO05D010016 4.6e-65 251.9 354 46.6
BraA06t26263Z Brassica rapa HOM05D003348 ORTHO05D011028 4.0e-61 238.8 174 75.9
BcaC05g27372 Brassica carinata HOM05D003348 ORTHO05D010016 1.2e-60 237.3 221 63.3
BcaC02g08685 Brassica carinata HOM05D003348 ORTHO05D010016 2.0e-60 236.5 177 70.1
C01p28000 Brassica napus HOM05D003348 ORTHO05D010016 1.9e-58 229.9 181 69.1
BcaB05g23930 Brassica carinata HOM05D003348 ORTHO05D010016 1.6e-57 226.9 276 50.7
BcaC01g00111 Brassica carinata HOM05D003348 ORTHO05D010016 1.6e-57 226.9 181 70.7
BraA02t07591Z Brassica rapa HOM05D003348 ORTHO05D010016 1.6e-57 226.9 170 74.1
BcaC03g16878 Brassica carinata HOM05D003348 ORTHO05D010016 3.9e-56 222.2 268 52.2
C09p50420 Brassica napus HOM05D003348 ORTHO05D010016 3.9e-56 222.2 166 72.9
BcaC05g28875 Brassica carinata HOM05D003348 ORTHO05D010016 5.6e-55 218.4 194 62.9
A03p65970 Brassica napus HOM05D003348 ORTHO05D010016 2.1e-54 216.5 170 70.6
BcaB06g26670 Brassica carinata HOM05D003348 ORTHO05D010016 1.1e-53 214.2 181 64.6
BcaC04g20110 Brassica carinata HOM05D006890 ORTHO05D009907 2.4e-53 213.0 120 87.5
BraA05t21730Z Brassica rapa HOM05D003348 ORTHO05D010016 3.1e-53 212.6 159 73.0
BcaB07g33152 Brassica carinata HOM05D003348 ORTHO05D010016 6.9e-53 211.5 170 65.9
BolC8t46861H Brassica oleracea HOM05D003348 ORTHO05D010016 7.6e-52 208.0 150 75.3
BcaC03g16941 Brassica carinata HOM05D003348 ORTHO05D010016 2.9e-51 206.1 120 86.7
BcaC02g10517 Brassica carinata HOM05D003348 ORTHO05D010016 6.0e-49 198.4 209 57.4
BcaB05g22915 Brassica carinata HOM05D003348 ORTHO05D010016 1.8e-48 196.8 131 74.0
BolC1t02733H Brassica oleracea HOM05D003348 ORTHO05D010016 3.0e-48 196.1 175 62.9
C07p04070 Brassica napus HOM05D003348 ORTHO05D010016 1.5e-47 193.7 167 66.5
C06p29220 Brassica napus HOM05D003348 ORTHO05D010016 2.5e-47 193.0 173 67.1
C03p71560 Brassica napus HOM05D003348 ORTHO05D010016 2.1e-46 189.9 116 84.5
BcaB06g26643 Brassica carinata HOM05D003348 ORTHO05D010016 2.4e-45 186.4 131 71.0
BcaB01g01113 Brassica carinata HOM05D003348 ORTHO05D010016 4.5e-44 182.2 120 72.5
C09p24810 Brassica napus HOM05D003348 ORTHO05D010016 8.4e-43 177.9 123 73.2
BolC9t57897H Brassica oleracea HOM05D003348 ORTHO05D010016 3.2e-42 176.0 147 66.7
BcaC07g42527 Brassica carinata HOM05D003348 ORTHO05D009907 1.2e-41 174.1 187 50.8
BcaC08g45319 Brassica carinata HOM05D003348 ORTHO05D010016 6.0e-41 171.8 96 92.7
A03p49040 Brassica napus HOM05D003348 ORTHO05D010016 2.3e-40 169.9 112 77.7
A04p08260 Brassica napus HOM05D003348 ORTHO05D010016 2.3e-40 169.9 112 77.7
BcaC05g25941 Brassica carinata HOM05D003348 ORTHO05D010016 1.9e-39 166.8 147 65.3
BcaC06g36529 Brassica carinata HOM05D003348 ORTHO05D010016 3.3e-39 166.0 98 89.8
C02p47780 Brassica napus HOM05D003348 ORTHO05D010016 5.7e-39 165.2 98 87.8
BcaB04g19403 Brassica carinata HOM05D003348 ORTHO05D010016 2.4e-37 159.8 152 58.6
BolC2t10813H Brassica oleracea HOM05D003348 ORTHO05D010016 3.0e-32 142.9 84 86.9
BolC4t24342H Brassica oleracea HOM05D003348 ORTHO05D010016 3.0e-32 142.9 82 91.5
C09p44080 Brassica napus HOM05D003348 ORTHO05D010016 2.5e-31 139.8 84 84.5
A09p59860 Brassica napus HOM05D003348 ORTHO05D011028 4.3e-31 139.0 220 42.7
A09p62230 Brassica napus HOM05D006890 ORTHO05D000421 4.3e-31 139.0 86 83.7
C03p32970 Brassica napus HOM05D003348 ORTHO05D010016 4.3e-31 139.0 86 83.7
BcaB03g16334 Brassica carinata HOM05D003348 ORTHO05D010016 1.8e-29 133.7 131 54.2
BcaB07g32279 Brassica carinata HOM05D003348 ORTHO05D010016 9.0e-29 131.3 108 60.2
BcaB07g33923 Brassica carinata HOM05D003348 ORTHO05D010016 1.1e-26 124.4 77 80.5
A04p10090 Brassica napus HOM05D003348 ORTHO05D010016 1.2e-25 120.9 227 40.1
BraA04t16864Z Brassica rapa HOM05D003348 ORTHO05D010016 2.3e-24 116.7 227 39.6
C02p48450 Brassica napus HOM05D003348 ORTHO05D010016 8.2e-22 108.2 61 91.8
BolC2t10875H Brassica oleracea HOM05D003348 ORTHO05D010016 8.2e-22 108.2 61 91.8
BcaB03g16335 Brassica carinata HOM05D003348 ORTHO05D010016 1.1e-21 107.8 72 73.6
BolC4t24341H Brassica oleracea HOM05D003348 ORTHO05D011028 3.6e-17 92.8 93 58.1
C03p71550 Brassica napus HOM05D003348 ORTHO05D010016 1.4e-16 90.9 59 81.4
C08p06960 Brassica napus HOM05D003348 ORTHO05D011028 8.8e-16 88.2 51 90.2
Aa31sc263G10 Aethionema arabicum HOM05D003348 ORTHO05D000395 4.4e-15 85.9 175 27.4
A10p18440 Brassica napus HOM05D003348 ORTHO05D010016 7.4e-15 85.1 98 53.1
C04p27970 Brassica napus HOM05D003348 ORTHO05D011028 2.2e-14 83.6 78 59.0
BraA09t38032Z Brassica rapa HOM05D003348 ORTHO05D010016 6.3e-14 82.0 85 55.3
Aa31LG9G5280 Aethionema arabicum HOM05D003348 ORTHO05D010016 5.3e-13 79.0 132 33.3
Aa31LG2G17250 Aethionema arabicum HOM05D003348 ORTHO05D010016 9.1e-13 78.2 182 29.1
Aa31sc411G20 Aethionema arabicum HOM05D003348 ORTHO05D000395 2.0e-12 77.0 132 28.8
Aa31sc214G40 Aethionema arabicum HOM05D003348 ORTHO05D000395 3.5e-12 76.3 208 26.0
Carub.0008s2148 Capsella rubella HOM05D000471 ORTHO05D000199 4.5e-12 75.9 174 28.7
BraA01t03402Z Brassica rapa HOM05D003348 ORTHO05D010016 5.9e-12 75.5 51 76.5
Aa31LG5G22030 Aethionema arabicum HOM05D003348 ORTHO05D000395 1.7e-11 73.9 182 26.4
BcaC04g20095 Brassica carinata HOM05D006890 ORTHO05D000421 1.7e-11 73.9 45 82.2
Aa31LG9G6060 Aethionema arabicum HOM05D003348 ORTHO05D000395 1.9e-10 70.5 185 24.9
A04p11990 Brassica napus HOM05D003348 ORTHO05D011028 9.4e-10 68.2 203 32.5
BolC7t40723H Brassica oleracea HOM05D003348 ORTHO05D040102 9.4e-10 68.2 115 42.6
Thhalv10002307m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.2e-09 67.8 138 29.7
BcaC02g10149 Brassica carinata HOM05D000977 ORTHO05D001094 2.1e-09 67.0 217 25.8
BcaC06g36215 Brassica carinata HOM05D000977 ORTHO05D001094 2.1e-09 67.0 175 26.9
Sp1g31930 Schrenkiella parvula HOM05D010384 ORTHO05D013516 2.7e-09 66.6 113 32.7
C06p34230 Brassica napus HOM05D006890 ORTHO05D040102 6.1e-09 65.5 115 42.6
BcaC02g10227 Brassica carinata HOM05D000977 ORTHO05D001094 8.0e-09 65.1 175 25.7
Thhalv10021988m.g Eutrema salsugineum HOM05D000977 ORTHO05D001094 8.0e-09 65.1 184 27.7
Thhalv10029454m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 8.0e-09 65.1 137 29.2
Thhalv10002160m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.4e-08 64.3 139 28.8
SpUn0002_0500 Schrenkiella parvula HOM05D003348 ORTHO05D010016 1.8e-08 63.9 64 46.9
BcaC05g25804 Brassica carinata HOM05D000471 ORTHO05D000199 2.3e-08 63.5 66 43.9
C09p20800 Brassica napus HOM05D000471 ORTHO05D000199 2.3e-08 63.5 196 25.5
BolC5t30444H Brassica oleracea HOM05D000471 ORTHO05D010016 2.3e-08 63.5 66 43.9
Thhalv10012223m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 2.3e-08 63.5 136 28.7
Thhalv10029306m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 3.0e-08 63.2 138 29.0
C04p39280 Brassica napus HOM05D000471 ORTHO05D000199 5.2e-08 62.4 133 29.3
Thhalv10026990m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 5.2e-08 62.4 138 28.3
C02p48430 Brassica napus HOM05D003348 ORTHO05D011028 6.7e-08 62.0 37 86.5
BolC2t10873H Brassica oleracea HOM05D003348 ORTHO05D011028 6.7e-08 62.0 34 94.1
BolC6t38087H Brassica oleracea HOM05D003348 ORTHO05D010016 6.7e-08 62.0 37 86.5
BolC6t38449H Brassica oleracea HOM05D003348 ORTHO05D011028 6.7e-08 62.0 37 86.5
C07p03250 Brassica napus HOM05D003348 ORTHO05D011028 8.8e-08 61.6 37 83.8
C09p39140 Brassica napus HOM05D010384 ORTHO05D013516 8.8e-08 61.6 54 53.7
BolC9t56792H Brassica oleracea HOM05D010384 ORTHO05D021981 8.8e-08 61.6 54 53.7
BolC9t56793H Brassica oleracea HOM05D010384 ORTHO05D013516 8.8e-08 61.6 54 53.7
Thhalv10019524m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 8.8e-08 61.6 138 26.8
C03p65070 Brassica napus HOM05D003348 ORTHO05D011028 1.1e-07 61.2 37 83.8
C06p33300 Brassica napus HOM05D006890 ORTHO05D009907 1.1e-07 61.2 32 100.0
C07p41030 Brassica napus HOM05D003348 ORTHO05D011028 1.1e-07 61.2 37 83.8
Thhalv10015694m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.1e-07 61.2 180 22.8
BcaC03g16219 Brassica carinata HOM05D000977 ORTHO05D001094 1.5e-07 60.8 175 26.3
BcaC09g49808 Brassica carinata HOM05D000977 ORTHO05D001094 1.5e-07 60.8 178 26.4
C06p16640 Brassica napus HOM05D000471 ORTHO05D000199 1.5e-07 60.8 131 29.8
BolC5t32181H Brassica oleracea HOM05D000977 ORTHO05D001094 1.5e-07 60.8 175 25.7
BraA09t39939Z Brassica rapa HOM05D003348 ORTHO05D011028 1.5e-07 60.8 34 91.2
Thhalv10012192m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.5e-07 60.8 136 27.9
BcaC07g37500 Brassica carinata HOM05D000977 ORTHO05D001094 2.0e-07 60.5 181 26.0
BcaC06g35365 Brassica carinata HOM05D000977 ORTHO05D001094 2.6e-07 60.1 178 26.4
BcaC07g36913 Brassica carinata HOM05D000977 ORTHO05D001094 2.6e-07 60.1 175 25.1
C05p50020 Brassica napus HOM05D003348 ORTHO05D009907 2.6e-07 60.1 31 100.0
C09p44060 Brassica napus HOM05D003348 ORTHO05D010016 2.6e-07 60.1 37 83.8
BolC3t19447H Brassica oleracea HOM05D003348 ORTHO05D010016 2.6e-07 60.1 37 83.8
Thhalv10001218m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 2.6e-07 60.1 138 29.0
BcaB03g14367 Brassica carinata HOM05D000977 ORTHO05D001094 3.3e-07 59.7 178 25.8
BolC8t47761H Brassica oleracea HOM05D000471 ORTHO05D000199 3.3e-07 59.7 133 28.6
Sp7g08630 Schrenkiella parvula HOM05D000471 ORTHO05D000199 3.3e-07 59.7 132 25.0
A05p29030 Brassica napus HOM05D000471 ORTHO05D000199 4.4e-07 59.3 133 28.6
A07p12530 Brassica napus HOM05D000471 ORTHO05D000199 4.4e-07 59.3 133 28.6
BraA08t33333Z Brassica rapa HOM05D000471 ORTHO05D000199 4.4e-07 59.3 133 28.6
BcaB03g16512 Brassica carinata HOM05D000977 ORTHO05D001094 5.7e-07 58.9 180 28.9
C01p37340 Brassica napus HOM05D000977 ORTHO05D001094 5.7e-07 58.9 133 30.8
C06p09110 Brassica napus HOM05D000471 ORTHO05D000199 5.7e-07 58.9 133 27.8
Thhalv10005571m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 5.7e-07 58.9 106 28.3
Thhalv10012042m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 5.7e-07 58.9 136 26.5
BraA03t15651Z Brassica rapa HOM05D003348 ORTHO05D011028 7.5e-07 58.5 37 81.1
BcaC08g43369 Brassica carinata HOM05D000977 ORTHO05D001094 9.7e-07 58.2 173 27.2
C03p66080 Brassica napus HOM05D000471 ORTHO05D000199 9.7e-07 58.2 133 28.6
C06p07370 Brassica napus HOM05D000977 ORTHO05D001094 9.7e-07 58.2 173 27.2
BolC2t10781H Brassica oleracea HOM05D000471 ORTHO05D000199 9.7e-07 58.2 133 28.6
Thhalv10000549m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 9.7e-07 58.2 138 25.4
Thhalv10023860m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 9.7e-07 58.2 138 26.1
Aa31LG11G7530 Aethionema arabicum HOM05D000471 ORTHO05D000199 1.3e-06 57.8 136 29.4
BcaC04g22378 Brassica carinata HOM05D000977 ORTHO05D001094 1.7e-06 57.4 178 25.3
Sp3g28640 Schrenkiella parvula HOM05D000471 ORTHO05D000199 1.7e-06 57.4 132 25.0
BolC8t47821H Brassica oleracea HOM05D000977 ORTHO05D001094 2.2e-06 57.0 181 25.4
Thhalv10022967m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 2.2e-06 57.0 133 26.3
Aa31LG10G13150 Aethionema arabicum HOM05D000471 ORTHO05D000199 2.8e-06 56.6 216 23.6
Aa31LG2G16260 Aethionema arabicum HOM05D001285 ORTHO05D000199 3.7e-06 56.2 216 23.6
Aa31LG7G10700 Aethionema arabicum HOM05D000471 ORTHO05D000199 3.7e-06 56.2 141 27.0
BcaC06g34451 Brassica carinata HOM05D000977 ORTHO05D001094 3.7e-06 56.2 178 26.4
BolC2t10008H Brassica oleracea HOM05D000471 ORTHO05D000199 3.7e-06 56.2 136 26.5
BolC5t30552H Brassica oleracea HOM05D000471 ORTHO05D000199 3.7e-06 56.2 135 25.2
BolC9t55617H Brassica oleracea HOM05D000471 ORTHO05D000199 3.7e-06 56.2 133 28.6
Thhalv10019787m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 3.7e-06 56.2 138 27.5
BcaC01g02182 Brassica carinata HOM05D000977 ORTHO05D001094 4.8e-06 55.8 178 25.8
BcaC02g09888 Brassica carinata HOM05D000977 ORTHO05D001094 4.8e-06 55.8 178 25.8
A04p14250 Brassica napus HOM05D000977 ORTHO05D001094 4.8e-06 55.8 178 25.8
BolSC21t60291H Brassica oleracea HOM05D000977 ORTHO05D001094 4.8e-06 55.8 178 25.8
Thhalv10002320m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 4.8e-06 55.8 201 25.9
Aa31LG9G6340 Aethionema arabicum HOM05D000471 ORTHO05D000199 6.3e-06 55.5 216 23.6
BcaC02g09936 Brassica carinata HOM05D000977 ORTHO05D001094 6.3e-06 55.5 179 24.6
BcaC08g43667 Brassica carinata HOM05D000977 ORTHO05D001094 6.3e-06 55.5 178 24.7
C03p83180 Brassica napus HOM05D000471 ORTHO05D000199 6.3e-06 55.5 136 27.2
BolC6t36171H Brassica oleracea HOM05D000977 ORTHO05D001094 6.3e-06 55.5 178 24.7
C03p56270 Brassica napus HOM05D000471 ORTHO05D000199 8.2e-06 55.1 138 28.3
BolC7t41538H Brassica oleracea HOM05D000977 ORTHO05D001094 8.2e-06 55.1 134 29.1
BolC7t41755H Brassica oleracea HOM05D000471 ORTHO05D000199 8.2e-06 55.1 136 26.5


User provided reference genes

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