Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g28876 Brassica carinata HOM05D002800 ORTHO05D021906 2.1e-112 409.1 208 100.0
C05p49990 Brassica napus HOM05D002800 ORTHO05D021906 2.7e-75 285.8 161 95.0
A02p04250 Brassica napus HOM05D002800 ORTHO05D008563 1.9e-28 130.2 512 28.5
C02p09130 Brassica napus HOM05D002800 ORTHO05D008563 1.9e-28 130.2 512 28.5
Sp6g26690 Schrenkiella parvula HOM05D002800 ORTHO05D008563 1.7e-26 123.6 512 27.7
BcaC03g13525 Brassica carinata HOM05D002800 ORTHO05D008563 1.2e-24 117.5 72 86.1
Thhalv10012819m.g Eutrema salsugineum HOM05D002800 ORTHO05D008563 2.8e-24 116.3 63 93.7
BolC2t06825H Brassica oleracea HOM05D002800 ORTHO05D008563 6.2e-24 115.2 72 83.3
BraA02t05388Z Brassica rapa HOM05D002800 ORTHO05D008563 6.2e-24 115.2 72 83.3
Carub.0006s1576 Capsella rubella HOM05D002800 ORTHO05D008563 6.2e-24 115.2 64 93.8
CARHR195660 Cardamine hirsuta HOM05D002800 ORTHO05D008563 8.1e-24 114.8 63 92.1
AL6G28620 Arabidopsis lyrata HOM05D002800 ORTHO05D008563 1.1e-23 114.4 63 92.1
AT5G17530 Arabidopsis thaliana HOM05D002800 ORTHO05D008563 1.8e-23 113.6 83 74.7
Aa31sc262G50 Aethionema arabicum HOM05D002800 ORTHO05D008563 2.6e-22 109.8 61 88.5
C05p24440 Brassica napus HOM05D001658 ORTHO05D001406 2.9e-21 106.3 63 85.7
THA.LOC104799379 Tarenaya hassleriana HOM05D002800 ORTHO05D008563 1.4e-20 104.0 63 81.0
GSVIVG01001963001 Vitis vinifera HOM05D002800 ORTHO05D008563 1.6e-19 100.5 147 45.6
PGR044G1821 Punica granatum HOM05D002800 ORTHO05D008563 6.0e-19 98.6 63 77.8
TWI15G0073 Tripterygium wilfordii HOM05D002800 ORTHO05D008563 1.3e-18 97.4 63 76.2
Gohir.D10G213700 Gossypium hirsutum HOM05D002800 ORTHO05D008563 2.3e-18 96.7 62 77.4
Gorai.011G239000 Gossypium raimondii HOM05D002800 ORTHO05D008563 2.3e-18 96.7 62 77.4
Sabra10G0172400 Salix brachista HOM05D002800 ORTHO05D008563 3.0e-18 96.3 63 74.6
MELO3C019799.2 Cucumis melo HOM05D002800 ORTHO05D008563 3.9e-18 95.9 62 75.8
CsaV3_6G036460 Cucumis sativus L. HOM05D002800 ORTHO05D008563 3.9e-18 95.9 62 74.2
Oeu031346.1 Olea europaea HOM05D002800 ORTHO05D008563 3.9e-18 95.9 62 75.8
Atru.chr12.759 Acer truncatum HOM05D002800 ORTHO05D008563 5.1e-18 95.5 63 74.6
Ah.08g209400 Amaranthus hybridus HOM05D002800 ORTHO05D008563 5.1e-18 95.5 57 80.7
Gohir.A10G205400 Gossypium hirsutum HOM05D002800 ORTHO05D008563 5.1e-18 95.5 62 75.8
Medtr1g094980 Medicago truncatula HOM05D002800 ORTHO05D008563 5.1e-18 95.5 64 76.6
Atru.chr12.783 Acer truncatum HOM05D002800 ORTHO05D008563 6.6e-18 95.1 63 74.6
CSS0038780 Camellia sinensis var. sinensis HOM05D002800 ORTHO05D008563 6.6e-18 95.1 63 74.6
Potri.008G039200 Populus trichocarpa HOM05D002800 ORTHO05D008563 6.6e-18 95.1 64 71.9
ClCG08G007530 Citrullus lanatus HOM05D002800 ORTHO05D008563 8.7e-18 94.7 67 71.6
Manes.10G046600 Manihot esculenta HOM05D002800 ORTHO05D008563 8.7e-18 94.7 57 80.7
Psat6g183400 Pisum sativum HOM05D002800 ORTHO05D008563 1.1e-17 94.4 64 75.0
Aqoxy1G01227 Aquilegia oxysepala HOM05D002800 ORTHO05D008563 1.5e-17 94.0 62 72.6
Duzib106G1770 Durio zibethinus HOM05D002800 ORTHO05D008563 1.5e-17 94.0 62 74.2
PSO339G3461 Papaver somniferum HOM05D002800 ORTHO05D008563 1.5e-17 94.0 63 71.4
PSO384G1174 Papaver somniferum HOM05D002800 ORTHO05D008563 1.5e-17 94.0 63 71.4
CDE08G1164 Ceratophyllum demersum HOM05D002800 ORTHO05D008563 1.9e-17 93.6 70 67.1
Glyma.10G210700 Glycine max HOM05D002800 ORTHO05D008563 1.9e-17 93.6 67 70.1
Thecc.10G075100 Theobroma cacao HOM05D002800 ORTHO05D008563 1.9e-17 93.6 62 75.8
GSVIVG01016267001 Vitis vinifera HOM05D002800 ORTHO05D008563 1.9e-17 93.6 63 73.0
CANSAT56G2733 Cannabis sativa HOM05D002800 ORTHO05D008563 2.5e-17 93.2 62 74.2
Eucgr.J01084 Eucalyptus grandis HOM05D002800 ORTHO05D008563 2.5e-17 93.2 62 74.2
ATR0048G007 Amborella trichopoda HOM05D002800 ORTHO05D008563 3.3e-17 92.8 69 66.7
Haze_16886 Corylus avellana HOM05D002800 ORTHO05D008563 3.3e-17 92.8 62 74.2
HanXRQChr14g0456851 Helianthus annuus HOM05D002800 ORTHO05D008563 3.3e-17 92.8 64 71.9
Sed0015272 Sechium edule HOM05D002800 ORTHO05D008563 3.3e-17 92.8 62 72.6
Sc09g0006270 Simmondsia chinensis HOM05D002800 ORTHO05D008563 3.3e-17 92.8 57 80.7
Solyc04g005030.4 Solanum lycopersicum HOM05D002800 ORTHO05D008563 3.3e-17 92.8 65 72.3
Sopen04g001040 Solanum pennellii HOM05D002800 ORTHO05D008563 3.3e-17 92.8 65 72.3
Cpa.g.sc53.86 Carica papaya HOM05D002800 ORTHO05D008563 4.3e-17 92.4 63 71.4
AUR62006403 Chenopodium quinoa HOM05D002800 ORTHO05D008563 4.3e-17 92.4 60 76.7
Glyma.20G179900 Glycine max HOM05D002800 ORTHO05D008563 4.3e-17 92.4 58 77.6
Ciclev10031045m.g Citrus clementina HOM05D002800 ORTHO05D008563 5.6e-17 92.0 63 73.0
SalBow4G0916 Salvia bowleyana HOM05D002800 ORTHO05D008563 5.6e-17 92.0 58 74.1
SGA_v2.0_scaffold478G52239 Striga asiatica HOM05D002800 ORTHO05D008563 5.6e-17 92.0 57 75.4
Zm00001eb306410 Zea mays HOM05D002800 ORTHO05D008563 5.6e-17 92.0 64 70.3
CAN.G839.3 Capsicum annuum HOM05D002800 ORTHO05D008563 7.3e-17 91.7 64 73.4
Cc02_g11310 Coffea canephora HOM05D002800 ORTHO05D008563 7.3e-17 91.7 64 70.3
Lj1C913T2 Lonicera japonica HOM05D002800 ORTHO05D008563 7.3e-17 91.7 62 72.6
Phvul.007G094900 Phaseolus vulgaris HOM05D002800 ORTHO05D008563 7.3e-17 91.7 57 80.7
Potri.010G223000 Populus trichocarpa HOM05D002800 ORTHO05D008563 7.3e-17 91.7 63 71.4
Rhsim09G0151400 Rhododendron simsii HOM05D002800 ORTHO05D008563 7.3e-17 91.7 62 72.6
EL10Ac7g17090 Beta vulgaris HOM05D002800 ORTHO05D008563 9.6e-17 91.3 60 75.0
Ca_10569_v3 Cicer arietinum L. HOM05D002800 ORTHO05D008563 9.6e-17 91.3 64 70.3
Sabra08G0026900 Salix brachista HOM05D002800 ORTHO05D008563 9.6e-17 91.3 57 77.2
TPR.G1920 Trifolium pratense HOM05D002800 ORTHO05D008563 1.3e-16 90.9 64 73.4
Actinidia32447 Actinidia chinensis HOM05D002800 ORTHO05D008563 1.6e-16 90.5 62 71.0
CSS0042688 Camellia sinensis var. sinensis HOM05D002800 ORTHO05D008563 1.6e-16 90.5 63 71.4
Lsat_1_v5_gn_2_112341 Lactuca sativa HOM05D002800 ORTHO05D008563 1.6e-16 90.5 58 74.1
Os07g0447800 Oryza sativa ssp. japonica HOM05D002800 ORTHO05D008563 1.6e-16 90.5 64 68.8
Peaxi162Scf01011g00005 Petunia axillaris HOM05D002800 ORTHO05D008563 1.6e-16 90.5 65 69.2
QL08p055739 Quercus lobata HOM05D002800 ORTHO05D008563 1.6e-16 90.5 67 65.7
VMungo0720G2543 Vigna mungo HOM05D002800 ORTHO05D008563 1.6e-16 90.5 57 77.2
AUR62029746 Chenopodium quinoa HOM05D002800 ORTHO05D008563 2.1e-16 90.1 60 75.0
DCAR_006435 Daucus carota HOM05D002800 ORTHO05D008563 2.1e-16 90.1 62 66.1
ECA238G0500 Erigeron canadensis HOM05D002800 ORTHO05D008563 2.1e-16 90.1 57 75.4
Lalb_Chr06g0162361 Lupinus albus HOM05D002800 ORTHO05D008563 2.1e-16 90.1 58 75.9
Nn2g10811 Nelumbo nucifera HOM05D002800 ORTHO05D008563 2.1e-16 90.1 57 78.9
TAR369G0845 Trochodendron aralioides HOM05D002800 ORTHO05D008563 2.1e-16 90.1 63 69.8
MD01G1108200 Malus domestica HOM05D002800 ORTHO05D008563 2.8e-16 89.7 63 69.8
Prupe.2G213100 Prunus persica HOM05D002800 ORTHO05D008563 3.6e-16 89.4 63 69.8
Migut.F01983 Erythranthe guttata HOM05D002800 ORTHO05D008563 4.8e-16 89.0 62 69.4
Lj5g0013059 Lotus japonicus HOM05D002800 ORTHO05D008563 4.8e-16 89.0 63 69.8
PGSC0003DMG400001912 Solanum tuberosum HOM05D002800 ORTHO05D008563 4.8e-16 89.0 65 69.2
Hund20229 Selenicereus undatus HOM05D002800 ORTHO05D008563 6.2e-16 88.6 65 70.8
Nitab4.5_0002524g0030 Nicotiana tabacum HOM05D002800 ORTHO05D008563 8.1e-16 88.2 65 69.2
unitig_8.g4691 Utricularia gibba HOM05D002800 ORTHO05D008563 1.1e-15 87.8 64 67.2
arahy.Tifrunner.gnm1.ann1.KPC10E Arachis hypogaea HOM05D002800 ORTHO05D008563 2.4e-15 86.7 62 69.4
Lalb_Chr02g0142211 Lupinus albus HOM05D002800 ORTHO05D008563 2.4e-15 86.7 58 74.1
Nitab4.5_0001053g0080 Nicotiana tabacum HOM05D002800 ORTHO05D008563 3.1e-15 86.3 65 67.7
RcHm_v2.0_Chr1g0363251 Rosa chinensis HOM05D002800 ORTHO05D008563 4.0e-15 85.9 63 66.7
FvH4_7g19370 Fragaria vesca HOM05D002800 ORTHO05D008563 5.3e-15 85.5 63 68.3
FAN06G4795 Fragaria x ananassa HOM05D002800 ORTHO05D008563 5.3e-15 85.5 63 68.3
arahy.Tifrunner.gnm1.ann1.681S5P Arachis hypogaea HOM05D002800 ORTHO05D008563 6.9e-15 85.1 62 67.7
FAN03G0883 Fragaria x ananassa HOM05D002800 ORTHO05D008563 6.9e-15 85.1 63 68.3
FAN10G1943 Fragaria x ananassa HOM05D002800 ORTHO05D008563 2.0e-14 83.6 63 66.7
FAN10G3729 Fragaria x ananassa HOM05D002800 ORTHO05D008563 2.0e-14 83.6 63 66.7
Thecc.10G074900 Theobroma cacao HOM05D002800 ORTHO05D021906 2.0e-14 83.6 62 69.4
Mapoly0011s0106 Marchantia polymorpha HOM05D002800 ORTHO05D008563 2.6e-14 83.2 63 66.7
Pp3c20_2120 Physcomitrium patens HOM05D002800 ORTHO05D008563 2.6e-14 83.2 57 73.7
AagrBONN_evm.TU.Sc2ySwM_117.2596 Anthoceros agrestis HOM05D002800 ORTHO05D008563 7.6e-14 81.6 62 64.5
Dinv36436 Davidia involucrata HOM05D002800 ORTHO05D008563 1.9e-12 77.0 61 67.2
SMO144G0140 Selaginella moellendorffii HOM05D002800 ORTHO05D008563 2.4e-12 76.6 57 66.7
SGA_v2.0_scaffold42G16019 Striga asiatica HOM05D002800 ORTHO05D023340 5.4e-12 75.5 61 63.9
MBI07_g26016_MAGBIO Magnolia biondii HOM05D002800 ORTHO05D008563 4.6e-11 72.4 61 62.3
SHI08822 Sapria himalayana HOM05D002800 ORTHO05D008563 6.0e-11 72.0 65 55.4
Actinidia32446 Actinidia chinensis HOM05D002800 ORTHO05D023340 1.0e-10 71.2 65 61.5
CiPaw.01G272300 Carya illinoinensis HOM05D002800 ORTHO05D008563 1.0e-10 71.2 61 62.3
MD07G1174300 Malus domestica HOM05D002800 ORTHO05D021906 2.3e-10 70.1 58 65.5
Nitab4.5_0001053g0090 Nicotiana tabacum HOM05D002800 ORTHO05D008563 1.1e-09 67.8 65 56.9
GSVIVG01032226001 Vitis vinifera HOM05D000869 ORTHO05D000685 1.5e-09 67.4 49 73.5
CSS0006255 Camellia sinensis var. sinensis HOM05D002800 ORTHO05D008563 4.0e-07 59.3 49 65.3
CSS0018456 Camellia sinensis var. sinensis HOM05D002800 ORTHO05D021906 4.0e-07 59.3 49 65.3
EL10Ac1g01349 Beta vulgaris HOM05D003468 ORTHO05D002806 5.8e-06 55.5 51 56.9


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