Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g28875 Brassica carinata HOM05D003348 ORTHO05D010016 3.6e-243 844.7 506 100.0
C09p43770 Brassica napus HOM05D003348 ORTHO05D010016 2.3e-125 453.4 468 67.3
BcaC02g11615 Brassica carinata HOM05D003348 ORTHO05D010016 2.4e-122 443.4 368 68.8
BolC9t57261H Brassica oleracea HOM05D003348 ORTHO05D010016 6.0e-121 438.7 468 66.0
BcaC03g16941 Brassica carinata HOM05D003348 ORTHO05D010016 2.8e-118 429.9 493 58.6
C07p09080 Brassica napus HOM05D003348 ORTHO05D010016 1.9e-106 390.6 377 71.6
BolC1t02733H Brassica oleracea HOM05D003348 ORTHO05D010016 3.4e-100 369.8 449 57.7
A03p49040 Brassica napus HOM05D003348 ORTHO05D010016 6.4e-99 365.5 394 65.2
C01p28000 Brassica napus HOM05D003348 ORTHO05D010016 2.6e-92 343.6 397 59.7
BolC7t41316H Brassica oleracea HOM05D003348 ORTHO05D010016 2.6e-92 343.6 339 70.5
BcaC04g20417 Brassica carinata HOM05D003348 ORTHO05D010016 6.0e-89 332.4 212 82.5
BolC9t57897H Brassica oleracea HOM05D003348 ORTHO05D010016 1.7e-88 330.9 439 59.7
C06p29220 Brassica napus HOM05D003348 ORTHO05D010016 2.5e-87 327.0 444 54.7
BraA06t26263Z Brassica rapa HOM05D003348 ORTHO05D011028 7.4e-87 325.5 427 54.3
BcaC07g37267 Brassica carinata HOM05D003348 ORTHO05D010016 5.3e-85 319.3 193 83.4
BcaC06g36451 Brassica carinata HOM05D003348 ORTHO05D010016 9.0e-85 318.5 490 47.6
C09p50420 Brassica napus HOM05D003348 ORTHO05D010016 2.2e-83 313.9 439 53.3
BcaB07g33116 Brassica carinata HOM05D003348 ORTHO05D010016 6.4e-83 312.4 472 44.9
BraA05t21730Z Brassica rapa HOM05D003348 ORTHO05D010016 8.4e-83 312.0 329 58.7
BcaB05g22915 Brassica carinata HOM05D003348 ORTHO05D010016 1.3e-80 304.7 449 47.7
A02p04450 Brassica napus HOM05D003348 ORTHO05D010016 2.2e-75 287.3 443 44.5
BcaC06g36007 Brassica carinata HOM05D003348 ORTHO05D010016 8.7e-72 275.4 217 70.0
BraA09t38032Z Brassica rapa HOM05D003348 ORTHO05D010016 5.7e-71 272.7 412 55.6
BcaC02g10517 Brassica carinata HOM05D003348 ORTHO05D010016 2.2e-67 260.8 211 68.7
A03p65970 Brassica napus HOM05D003348 ORTHO05D010016 2.2e-67 260.8 417 48.2
A04p10090 Brassica napus HOM05D003348 ORTHO05D010016 8.5e-67 258.8 304 54.9
BcaB01g01113 Brassica carinata HOM05D003348 ORTHO05D010016 2.7e-65 253.8 474 40.3
BcaC02g08685 Brassica carinata HOM05D003348 ORTHO05D010016 3.6e-65 253.4 382 46.9
C05p18920 Brassica napus HOM05D003348 ORTHO05D010016 4.6e-65 253.1 245 60.0
BolC8t47537H Brassica oleracea HOM05D003348 ORTHO05D010016 4.6e-65 253.1 354 48.6
BraA04t16864Z Brassica rapa HOM05D003348 ORTHO05D010016 7.9e-65 252.3 304 54.3
BcaC03g16878 Brassica carinata HOM05D003348 ORTHO05D010016 1.3e-64 251.5 209 66.5
BolC7t40801H Brassica oleracea HOM05D003348 ORTHO05D010016 2.3e-64 250.8 393 45.5
BolC6t38448H Brassica oleracea HOM05D003348 ORTHO05D010016 7.4e-63 245.7 264 56.1
C04p13150 Brassica napus HOM05D003348 ORTHO05D010016 1.3e-62 245.0 137 89.8
A01p32750 Brassica napus HOM05D003348 ORTHO05D010016 1.8e-61 241.1 137 89.8
BcaB03g16335 Brassica carinata HOM05D003348 ORTHO05D010016 1.0e-59 235.3 346 48.0
BcaC07g42527 Brassica carinata HOM05D003348 ORTHO05D009907 1.3e-59 235.0 412 42.7
BcaC04g20110 Brassica carinata HOM05D006890 ORTHO05D009907 6.5e-59 232.6 160 76.9
C03p71560 Brassica napus HOM05D003348 ORTHO05D010016 1.1e-58 231.9 155 78.1
BcaB07g32279 Brassica carinata HOM05D003348 ORTHO05D010016 7.2e-58 229.2 435 41.4
BolC4t24341H Brassica oleracea HOM05D003348 ORTHO05D011028 1.8e-56 224.6 414 42.8
C07p04070 Brassica napus HOM05D003348 ORTHO05D010016 1.5e-55 221.5 375 44.5
BraA03t15649Z Brassica rapa HOM05D003348 ORTHO05D010016 2.2e-54 217.6 139 82.7
BcaC05g28880 Brassica carinata HOM05D003348 ORTHO05D010016 2.8e-54 217.2 352 43.5
C05p49980 Brassica napus HOM05D003348 ORTHO05D011028 3.7e-54 216.9 430 48.4
BcaB06g26670 Brassica carinata HOM05D003348 ORTHO05D010016 6.3e-54 216.1 413 41.2
BcaB06g26643 Brassica carinata HOM05D003348 ORTHO05D010016 1.8e-53 214.5 174 66.1
BcaC05g27372 Brassica carinata HOM05D003348 ORTHO05D010016 3.1e-53 213.8 193 62.7
BcaC01g00111 Brassica carinata HOM05D003348 ORTHO05D010016 4.1e-53 213.4 309 45.6
BolC8t46861H Brassica oleracea HOM05D003348 ORTHO05D010016 1.2e-52 211.8 292 48.6
BcaB07g33152 Brassica carinata HOM05D003348 ORTHO05D010016 1.4e-50 204.9 473 36.6
A04p11990 Brassica napus HOM05D003348 ORTHO05D011028 4.2e-50 203.4 279 50.2
BcaB03g16334 Brassica carinata HOM05D003348 ORTHO05D010016 4.4e-47 193.4 510 34.9
A04p08260 Brassica napus HOM05D003348 ORTHO05D010016 1.1e-45 188.7 104 89.4
BcaB05g23930 Brassica carinata HOM05D003348 ORTHO05D010016 7.0e-45 186.0 369 39.6
C04p27970 Brassica napus HOM05D003348 ORTHO05D011028 2.6e-44 184.1 383 41.0
A09p59860 Brassica napus HOM05D003348 ORTHO05D011028 3.5e-44 183.7 348 39.4
BcaC03g16877 Brassica carinata HOM05D006890 ORTHO05D009907 2.2e-43 181.0 169 66.9
A10p18440 Brassica napus HOM05D003348 ORTHO05D010016 6.1e-41 172.9 293 42.0
BcaC05g25941 Brassica carinata HOM05D003348 ORTHO05D010016 2.0e-39 167.9 137 67.2
C06p05210 Brassica napus HOM05D006890 ORTHO05D009907 2.4e-37 161.0 133 72.2
C09p24810 Brassica napus HOM05D003348 ORTHO05D010016 9.1e-37 159.1 124 68.5
C07p03250 Brassica napus HOM05D003348 ORTHO05D011028 5.9e-36 156.4 160 67.5
BcaC05g25940 Brassica carinata HOM05D003348 ORTHO05D039563 1.0e-35 155.6 110 75.5
BolC3t19447H Brassica oleracea HOM05D003348 ORTHO05D010016 5.0e-35 153.3 160 66.2
BcaB04g19403 Brassica carinata HOM05D003348 ORTHO05D010016 1.5e-34 151.8 328 39.0
C03p65070 Brassica napus HOM05D003348 ORTHO05D011028 9.4e-34 149.1 161 77.6
C06p29200 Brassica napus HOM05D006890 ORTHO05D033100 8.0e-33 146.0 122 77.0
C07p03240 Brassica napus HOM05D006890 ORTHO05D009907 8.8e-32 142.5 132 67.4
BraA02t07591Z Brassica rapa HOM05D003348 ORTHO05D010016 2.2e-30 137.9 120 63.3
C06p34230 Brassica napus HOM05D006890 ORTHO05D040102 1.1e-29 135.6 215 47.9
BcaC08g45318 Brassica carinata HOM05D006890 ORTHO05D009907 2.4e-29 134.4 120 69.2
C02p48470 Brassica napus HOM05D006890 ORTHO05D009907 5.4e-29 133.3 170 56.5
C06p33300 Brassica napus HOM05D006890 ORTHO05D009907 9.1e-29 132.5 162 56.8
C02p48430 Brassica napus HOM05D003348 ORTHO05D011028 1.7e-27 128.3 138 87.0
BolC6t38083H Brassica oleracea HOM05D006890 ORTHO05D033100 1.5e-26 125.2 120 65.8
BolC6t38087H Brassica oleracea HOM05D003348 ORTHO05D010016 7.2e-26 122.9 71 94.4
BcaC06g36530 Brassica carinata HOM05D006890 ORTHO05D009907 8.0e-25 119.4 76 88.2
C07p04060 Brassica napus HOM05D006890 ORTHO05D009907 8.0e-25 119.4 137 61.3
C07p41030 Brassica napus HOM05D003348 ORTHO05D011028 8.0e-25 119.4 72 90.3
BolC9t57896H Brassica oleracea HOM05D006890 ORTHO05D009907 8.0e-25 119.4 118 62.7
C05p50020 Brassica napus HOM05D003348 ORTHO05D009907 1.4e-24 118.6 139 59.0
BolC6t38449H Brassica oleracea HOM05D003348 ORTHO05D011028 2.0e-23 114.8 132 71.2
A01p32740 Brassica napus HOM05D003348 ORTHO05D039563 2.6e-23 114.4 110 60.0
C09p44060 Brassica napus HOM05D003348 ORTHO05D010016 5.7e-23 113.2 301 38.5
BcaC03g16943 Brassica carinata HOM05D006890 ORTHO05D009907 2.8e-22 110.9 181 47.0
BolC2t10874H Brassica oleracea HOM05D003348 ORTHO05D010016 1.4e-21 108.6 57 91.2
C07p09090 Brassica napus HOM05D006890 ORTHO05D009907 3.5e-20 104.0 117 59.0
BraA03t15651Z Brassica rapa HOM05D003348 ORTHO05D011028 4.5e-20 103.6 73 82.2
BcaC04g20415 Brassica carinata HOM05D006890 ORTHO05D009907 5.9e-20 103.2 160 51.2
C01p27980 Brassica napus HOM05D006890 ORTHO05D009907 3.8e-19 100.5 141 52.5
BcaC04g20095 Brassica carinata HOM05D006890 ORTHO05D000421 3.3e-18 97.4 265 34.0
C05p18950 Brassica napus HOM05D006890 ORTHO05D000421 9.5e-18 95.9 124 56.5
BraA09t39941Z Brassica rapa HOM05D006890 ORTHO05D033100 1.2e-15 89.0 86 66.3
BolC2t10879H Brassica oleracea HOM05D006890 ORTHO05D009907 3.4e-15 87.4 120 55.0
BolC7t40723H Brassica oleracea HOM05D003348 ORTHO05D040102 9.8e-15 85.9 205 37.1
C09p53280 Brassica napus HOM05D003348 ORTHO05D011028 6.4e-14 83.2 73 68.5
BcaC06g36006 Brassica carinata HOM05D006890 ORTHO05D009907 1.1e-13 82.4 146 50.7
BolC2t06968H Brassica oleracea HOM05D006890 ORTHO05D009907 3.2e-13 80.9 98 54.1
C02p48440 Brassica napus HOM05D003348 ORTHO05D010016 4.1e-13 80.5 81 55.6
C09p43780 Brassica napus HOM05D006890 ORTHO05D009907 1.0e-11 75.9 75 61.3
C02p47780 Brassica napus HOM05D003348 ORTHO05D010016 1.7e-11 75.1 39 92.3
BolC2t10813H Brassica oleracea HOM05D003348 ORTHO05D010016 1.7e-11 75.1 39 92.3
A09p62230 Brassica napus HOM05D006890 ORTHO05D000421 5.0e-11 73.6 39 92.3
C03p32970 Brassica napus HOM05D003348 ORTHO05D010016 5.0e-11 73.6 39 92.3
BolC7t40722H Brassica oleracea HOM05D006890 ORTHO05D009907 5.0e-11 73.6 61 77.0
BraA01t03402Z Brassica rapa HOM05D003348 ORTHO05D010016 5.0e-11 73.6 39 92.3
BcaC08g45319 Brassica carinata HOM05D003348 ORTHO05D010016 8.6e-11 72.8 37 94.6
BolC9t57262H Brassica oleracea HOM05D006890 ORTHO05D009907 1.1e-10 72.4 75 58.7
C09p44080 Brassica napus HOM05D003348 ORTHO05D010016 1.5e-10 72.0 39 89.7
BraA09t39939Z Brassica rapa HOM05D003348 ORTHO05D011028 2.5e-10 71.2 77 62.3
BcaC06g36529 Brassica carinata HOM05D003348 ORTHO05D010016 6.2e-09 66.6 39 87.2
C09p24820 Brassica napus HOM05D003348 ORTHO05D010016 1.8e-08 65.1 35 85.7
C09p44070 Brassica napus HOM05D003348 ORTHO05D010016 1.8e-08 65.1 35 85.7
SpUn0002_0500 Schrenkiella parvula HOM05D003348 ORTHO05D010016 1.2e-07 62.4 52 55.8
C08p06960 Brassica napus HOM05D003348 ORTHO05D011028 4.4e-07 60.5 31 100.0
BolC2t10873H Brassica oleracea HOM05D003348 ORTHO05D011028 4.4e-07 60.5 31 100.0
C03p71550 Brassica napus HOM05D003348 ORTHO05D010016 5.8e-07 60.1 43 76.7
BolC6t38086H Brassica oleracea HOM05D003348 ORTHO05D010016 9.8e-07 59.3 33 81.8
BcaB04g17835 Brassica carinata HOM05D003348 ORTHO05D091710 4.9e-06 57.0 67 56.7


User provided reference genes

Program Settings