Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g28701 Brassica carinata HOM05D005306 ORTHO05D006158 7.2e-45 183.7 105 100.0
C03p04880 Brassica napus HOM05D005306 ORTHO05D006158 2.9e-14 82.0 67 71.6
BolC3t13020H Brassica oleracea HOM05D005306 ORTHO05D006158 2.9e-14 82.0 67 71.6
BcaNung06448 Brassica carinata HOM05D005306 ORTHO05D006158 1.5e-13 79.7 66 71.2
A03p04410 Brassica napus HOM05D005306 ORTHO05D006158 1.6e-12 76.3 67 70.1
BraA03t09786Z Brassica rapa HOM05D005306 ORTHO05D006158 1.6e-12 76.3 67 70.1
AT5G10110 Arabidopsis thaliana HOM05D005306 ORTHO05D006158 7.5e-10 67.4 68 55.9
THA.LOC104801720 Tarenaya hassleriana HOM05D005306 ORTHO05D006158 2.2e-09 65.9 72 52.8
Thhalv10014214m.g Eutrema salsugineum HOM05D005306 ORTHO05D006158 3.7e-09 65.1 72 58.3
CARHR279030 Cardamine hirsuta HOM05D005306 ORTHO05D006158 4.9e-09 64.7 72 54.2
BcaB04g20004 Brassica carinata HOM05D005306 ORTHO05D006158 6.3e-09 64.3 72 54.2
Aa31LG1G16850 Aethionema arabicum HOM05D005306 ORTHO05D006158 8.3e-09 63.9 72 52.8
THA.LOC104818490 Tarenaya hassleriana HOM05D005306 ORTHO05D006158 8.3e-09 63.9 72 51.4
AL6G20570 Arabidopsis lyrata HOM05D005306 ORTHO05D006158 1.4e-08 63.2 68 52.9
BcaC01g02741 Brassica carinata HOM05D005306 ORTHO05D006158 1.4e-08 63.2 72 52.8
C03p61010 Brassica napus HOM05D005306 ORTHO05D006158 1.4e-08 63.2 72 52.8
BolC3t18363H Brassica oleracea HOM05D005306 ORTHO05D006158 1.4e-08 63.2 72 52.8
BcaB02g09863 Brassica carinata HOM05D005306 ORTHO05D006158 1.8e-08 62.8 72 52.8
A06p31940 Brassica napus HOM05D005306 ORTHO05D006158 1.8e-08 62.8 72 52.8
BraA06t26127Z Brassica rapa HOM05D005306 ORTHO05D006158 1.8e-08 62.8 72 52.8
Thhalv10004547m.g Eutrema salsugineum HOM05D005306 ORTHO05D006158 1.8e-08 62.8 72 52.8
AL8G42620 Arabidopsis lyrata HOM05D005306 ORTHO05D006158 4.1e-08 61.6 74 51.4
Sp2g28200 Schrenkiella parvula HOM05D005306 ORTHO05D006158 5.4e-08 61.2 72 51.4
A09p08930 Brassica napus HOM05D005306 ORTHO05D006158 7.0e-08 60.8 72 52.8
BraA09t36544Z Brassica rapa HOM05D005306 ORTHO05D006158 7.0e-08 60.8 72 52.8
C09p10370 Brassica napus HOM05D005306 ORTHO05D006158 1.2e-07 60.1 72 51.4
Carub.0008s2596 Capsella rubella HOM05D005306 ORTHO05D006158 1.2e-07 60.1 74 51.4
THA.LOC104819305 Tarenaya hassleriana HOM05D005306 ORTHO05D006158 1.2e-07 60.1 72 50.0
BcaC04g23269 Brassica carinata HOM05D005306 ORTHO05D006158 1.6e-07 59.7 72 51.4
BolC9t53937H Brassica oleracea HOM05D005306 ORTHO05D006158 1.6e-07 59.7 72 51.4
Sp6g33290 Schrenkiella parvula HOM05D005306 ORTHO05D006158 1.6e-07 59.7 72 55.6
CARHR203180 Cardamine hirsuta HOM05D005306 ORTHO05D006158 2.7e-07 58.9 73 52.1
AT5G65120 Arabidopsis thaliana HOM05D005306 ORTHO05D006158 5.9e-07 57.8 74 51.4
Carub.0006s0857 Capsella rubella HOM05D005306 ORTHO05D006158 5.9e-07 57.8 58 56.9


User provided reference genes

Program Settings