Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g28699 Brassica carinata HOM05D007458 ORTHO05D009533 9.8e-150 533.5 278 100.0
BcaC03g16557 Brassica carinata HOM05D007458 ORTHO05D009533 1.6e-91 340.1 338 62.1
BcaC03g15848 Brassica carinata HOM05D007458 ORTHO05D009533 1.8e-42 177.2 274 48.2
BolC5t32809H Brassica oleracea HOM05D007458 ORTHO05D009533 9.1e-39 164.9 131 69.5
BcaC02g10564 Brassica carinata HOM05D007458 ORTHO05D009533 1.3e-32 144.4 258 41.1
BraA08t32793Z Brassica rapa HOM05D007458 ORTHO05D009533 2.2e-32 143.7 120 67.5
BcaC07g37469 Brassica carinata HOM05D007458 ORTHO05D009533 8.3e-32 141.7 264 41.3
BcaC05g27697 Brassica carinata HOM05D007458 ORTHO05D009533 7.0e-31 138.7 256 40.2
BcaC01g02142 Brassica carinata HOM05D007458 ORTHO05D009533 6.6e-29 132.1 283 39.9
BcaC06g35833 Brassica carinata HOM05D007458 ORTHO05D009533 3.3e-28 129.8 252 40.5
BcaC04g20664 Brassica carinata HOM05D007458 ORTHO05D009533 1.6e-27 127.5 266 41.4
BcaC09g49674 Brassica carinata HOM05D007458 ORTHO05D009533 2.8e-27 126.7 155 54.2
BolC5t32036H Brassica oleracea HOM05D007458 ORTHO05D009533 2.0e-25 120.6 71 87.3
BcaB06g26936 Brassica carinata HOM05D007458 ORTHO05D009533 2.2e-24 117.1 284 36.6
BcaC03g16530 Brassica carinata HOM05D007458 ORTHO05D009533 2.8e-24 116.7 267 35.6
BcaC02g10773 Brassica carinata HOM05D007458 ORTHO05D009533 6.3e-24 115.5 236 40.3
BcaC07g37431 Brassica carinata HOM05D007458 ORTHO05D009533 1.8e-23 114.0 171 48.0
BolC9t56683H Brassica oleracea HOM05D007458 ORTHO05D009533 3.2e-23 113.2 106 63.2
BolC8t47305H Brassica oleracea HOM05D007458 ORTHO05D009533 5.4e-23 112.5 128 55.5
BcaC01g02152 Brassica carinata HOM05D007458 ORTHO05D009533 2.7e-22 110.2 67 86.6
BcaC05g28700 Brassica carinata HOM05D007458 ORTHO05D009533 1.0e-21 108.2 67 86.6
BcaB03g16119 Brassica carinata HOM05D007458 ORTHO05D009533 1.3e-21 107.8 169 40.8
BcaB05g23524 Brassica carinata HOM05D007458 ORTHO05D009533 3.9e-21 106.3 277 33.2
BcaC07g37473 Brassica carinata HOM05D007458 ORTHO05D009533 3.9e-21 106.3 71 77.5
BcaC04g20873 Brassica carinata HOM05D007458 ORTHO05D009533 6.6e-21 105.5 269 36.1
BcaC01g02125 Brassica carinata HOM05D007458 ORTHO05D009533 1.5e-20 104.4 260 34.6
BcaC09g49039 Brassica carinata HOM05D007458 ORTHO05D009533 1.5e-20 104.4 219 38.8
BcaB06g26993 Brassica carinata HOM05D007458 ORTHO05D009533 1.6e-19 100.9 186 40.3
BcaC04g20898 Brassica carinata HOM05D007458 ORTHO05D009533 2.1e-19 100.5 166 44.0
BcaB06g26790 Brassica carinata HOM05D003835 ORTHO05D004930 6.1e-19 99.0 164 41.5
BolC6t38174H Brassica oleracea HOM05D007458 ORTHO05D009533 1.4e-18 97.8 71 71.8
BcaB08g35356 Brassica carinata HOM05D007458 ORTHO05D009533 1.8e-18 97.4 143 43.4
BcaB05g23672 Brassica carinata HOM05D007458 ORTHO05D009533 5.2e-18 95.9 146 43.2
BcaC04g20906 Brassica carinata HOM05D007458 ORTHO05D009533 1.2e-17 94.7 67 76.1
BolC9t56682H Brassica oleracea HOM05D007458 ORTHO05D009533 2.6e-17 93.6 71 69.0
BolC5t32501H Brassica oleracea HOM05D007458 ORTHO05D009533 3.4e-17 93.2 71 70.4
BolC3t19175H Brassica oleracea HOM05D003835 ORTHO05D004930 7.5e-17 92.0 103 44.7
BcaC04g20791 Brassica carinata HOM05D024368 ORTHO05D009533 1.3e-16 91.3 60 81.7
BcaC05g28049 Brassica carinata HOM05D003835 ORTHO05D004930 2.9e-16 90.1 172 37.2
BcaB04g17966 Brassica carinata HOM05D007458 ORTHO05D009533 3.7e-16 89.7 71 59.2
BcaB08g35159 Brassica carinata HOM05D003835 ORTHO05D004930 3.7e-16 89.7 85 47.1
BcaC09g48541 Brassica carinata HOM05D003835 ORTHO05D004930 3.7e-16 89.7 127 41.7
BcaC03g16751 Brassica carinata HOM05D003835 ORTHO05D004930 4.9e-16 89.4 104 46.2
BolC2t11376H Brassica oleracea HOM05D003835 ORTHO05D004930 1.4e-15 87.8 98 46.9
BcaB06g26962 Brassica carinata HOM05D007458 ORTHO05D009533 1.9e-15 87.4 71 62.0
BcaC05g27575 Brassica carinata HOM05D003835 ORTHO05D004930 1.9e-15 87.4 126 41.3
BcaC02g10813 Brassica carinata HOM05D003835 ORTHO05D004930 2.4e-15 87.0 115 43.5
BcaC07g37476 Brassica carinata HOM05D003835 ORTHO05D004930 2.4e-15 87.0 111 43.2
BolC8t47793H Brassica oleracea HOM05D003835 ORTHO05D004930 2.4e-15 87.0 111 43.2
BcaC04g20985 Brassica carinata HOM05D003835 ORTHO05D004930 3.2e-15 86.7 148 37.8
BcaB05g23615 Brassica carinata HOM05D007458 ORTHO05D009533 5.4e-15 85.9 70 57.1
BcaB07g33418 Brassica carinata HOM05D007458 ORTHO05D009533 1.6e-14 84.3 71 57.7
BcaB08g35357 Brassica carinata HOM05D007458 ORTHO05D009533 2.0e-14 84.0 71 53.5
BcaC04g20991 Brassica carinata HOM05D003835 ORTHO05D004930 2.0e-14 84.0 125 40.8
BcaC03g16198 Brassica carinata HOM05D003835 ORTHO05D004930 2.7e-14 83.6 110 40.9
BcaC09g50045 Brassica carinata HOM05D003835 ORTHO05D004930 2.7e-14 83.6 137 35.8
BcaC06g35162 Brassica carinata HOM05D003835 ORTHO05D004930 3.5e-14 83.2 74 52.7
BcaC08g45380 Brassica carinata HOM05D007458 ORTHO05D009533 3.5e-14 83.2 59 72.9
BcaB05g23109 Brassica carinata HOM05D007458 ORTHO05D009533 4.6e-14 82.8 107 47.7
BcaC08g44357 Brassica carinata HOM05D003835 ORTHO05D004930 6.0e-14 82.4 74 55.4
BcaC05g27887 Brassica carinata HOM05D003835 ORTHO05D004930 7.8e-14 82.0 100 45.0
BcaNung05987 Brassica carinata HOM05D003835 ORTHO05D004930 7.8e-14 82.0 90 46.7
BcaC06g36461 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-13 80.9 165 36.4
BcaB01g01339 Brassica carinata HOM05D003835 ORTHO05D004930 2.3e-13 80.5 115 41.7
BcaB08g35438 Brassica carinata HOM05D003835 ORTHO05D004930 2.3e-13 80.5 115 43.5
BolC5t32035H Brassica oleracea HOM05D007458 ORTHO05D009533 2.3e-13 80.5 59 71.2
BcaC04g20889 Brassica carinata HOM05D003835 ORTHO05D004930 3.0e-13 80.1 128 39.1
BcaC04g20891 Brassica carinata HOM05D003835 ORTHO05D004930 3.0e-13 80.1 148 35.1
BcaB02g11345 Brassica carinata HOM05D003835 ORTHO05D004930 3.9e-13 79.7 79 46.8
BcaC03g17353 Brassica carinata HOM05D003835 ORTHO05D004930 3.9e-13 79.7 184 33.7
BcaC08g43746 Brassica carinata HOM05D003835 ORTHO05D004930 3.9e-13 79.7 95 43.2
BcaC05g27762 Brassica carinata HOM05D007458 ORTHO05D009533 5.0e-13 79.3 269 31.6
BcaC06g36790 Brassica carinata HOM05D003835 ORTHO05D004930 5.0e-13 79.3 129 38.0
BcaC01g02043 Brassica carinata HOM05D003835 ORTHO05D004930 6.6e-13 79.0 128 37.5
BcaC04g20854 Brassica carinata HOM05D007458 ORTHO05D009533 8.6e-13 78.6 189 36.0
BcaC09g49552 Brassica carinata HOM05D003835 ORTHO05D004930 8.6e-13 78.6 98 42.9
BcaC06g35919 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-12 78.2 82 50.0
BcaC04g20623 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-12 77.8 133 37.6
BcaC04g20843 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-12 77.8 133 39.1
BcaB06g26909 Brassica carinata HOM05D003835 ORTHO05D004930 1.9e-12 77.4 148 35.8
BcaC03g16671 Brassica carinata HOM05D003835 ORTHO05D004930 1.9e-12 77.4 111 41.4
BcaC04g20888 Brassica carinata HOM05D003835 ORTHO05D004930 2.5e-12 77.0 97 40.2
BcaC05g27589 Brassica carinata HOM05D003835 ORTHO05D004930 2.5e-12 77.0 173 36.4
AL4G20670 Arabidopsis lyrata HOM05D003835 ORTHO05D004930 3.3e-12 76.6 82 43.9
BcaC05g28693 Brassica carinata HOM05D007458 ORTHO05D009533 3.3e-12 76.6 279 27.6
Carub.0008s0643 Capsella rubella HOM05D003835 ORTHO05D004930 3.3e-12 76.6 85 43.5
BcaB06g26912 Brassica carinata HOM05D007458 ORTHO05D009533 5.6e-12 75.9 133 39.1
BcaB07g33106 Brassica carinata HOM05D003835 ORTHO05D004930 7.3e-12 75.5 140 36.4
BcaC03g16228 Brassica carinata HOM05D003835 ORTHO05D004930 9.5e-12 75.1 74 48.6
BcaC05g27891 Brassica carinata HOM05D003835 ORTHO05D004930 1.6e-11 74.3 146 37.0
BcaC09g49753 Brassica carinata HOM05D003835 ORTHO05D004930 1.6e-11 74.3 128 39.1
BcaB02g11513 Brassica carinata HOM05D007458 ORTHO05D009533 2.1e-11 73.9 272 30.1
BcaC01g01952 Brassica carinata HOM05D003835 ORTHO05D004930 2.1e-11 73.9 133 36.8
BcaC01g02124 Brassica carinata HOM05D007458 ORTHO05D009533 2.1e-11 73.9 50 76.0
BcaC03g16196 Brassica carinata HOM05D003835 ORTHO05D004930 2.1e-11 73.9 152 32.2
BcaC06g35661 Brassica carinata HOM05D038213 ORTHO05D009533 2.8e-11 73.6 262 30.5
BcaC09g49664 Brassica carinata HOM05D003835 ORTHO05D004930 2.8e-11 73.6 83 48.2
BcaC03g14834 Brassica carinata HOM05D003835 ORTHO05D004930 8.0e-11 72.0 74 50.0
BcaC05g26694 Brassica carinata HOM05D007458 ORTHO05D009533 8.0e-11 72.0 325 27.1
BcaC03g16677 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-10 71.6 95 42.1
BcaB04g18230 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-10 71.2 140 37.9
BcaC04g20805 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-10 71.2 83 48.2
BcaB07g33148 Brassica carinata HOM05D007458 ORTHO05D009533 1.8e-10 70.9 67 58.2
BraA05t21178Z Brassica rapa HOM05D003835 ORTHO05D004930 1.8e-10 70.9 76 51.3
BcaB06g26994 Brassica carinata HOM05D007458 ORTHO05D009533 3.1e-10 70.1 262 28.2
CARHR257890 Cardamine hirsuta HOM05D003835 ORTHO05D004930 3.1e-10 70.1 92 38.0
BcaB03g16212 Brassica carinata HOM05D003835 ORTHO05D004930 4.0e-10 69.7 73 50.7
BolC4t24052H Brassica oleracea HOM05D003835 ORTHO05D004930 4.0e-10 69.7 128 38.3
BcaC03g16445 Brassica carinata HOM05D003835 ORTHO05D004930 5.2e-10 69.3 210 33.8
BcaC09g49698 Brassica carinata HOM05D003835 ORTHO05D004930 5.2e-10 69.3 100 41.0
BcaC01g02168 Brassica carinata HOM05D003835 ORTHO05D004930 6.8e-10 68.9 68 47.1
BcaC04g20885 Brassica carinata HOM05D003835 ORTHO05D004930 6.8e-10 68.9 60 58.3
BcaB04g17718 Brassica carinata HOM05D007458 ORTHO05D009533 1.2e-09 68.2 67 56.7
BcaB03g16163 Brassica carinata HOM05D007458 ORTHO05D009533 2.0e-09 67.4 166 33.1
BcaC01g02153 Brassica carinata HOM05D003835 ORTHO05D004930 2.0e-09 67.4 132 36.4
BcaC04g20877 Brassica carinata HOM05D007458 ORTHO05D009533 2.0e-09 67.4 117 47.0
BcaB05g23475 Brassica carinata HOM05D007458 ORTHO05D009533 3.4e-09 66.6 59 61.0
BcaB01g01376 Brassica carinata HOM05D003835 ORTHO05D004930 4.4e-09 66.2 67 49.3
BraA06t26729Z Brassica rapa HOM05D007458 ORTHO05D009533 4.4e-09 66.2 84 57.1
BcaB06g26788 Brassica carinata HOM05D007458 ORTHO05D009533 5.8e-09 65.9 47 68.1
BraA09t38710Z Brassica rapa HOM05D003835 ORTHO05D019916 5.8e-09 65.9 123 37.4
BcaB03g16388 Brassica carinata HOM05D003835 ORTHO05D004930 7.5e-09 65.5 68 51.5
Thhalv10002744m.g Eutrema salsugineum HOM05D003835 ORTHO05D004930 1.7e-08 64.3 72 44.4
BcaC02g10730 Brassica carinata HOM05D007458 ORTHO05D009533 3.7e-08 63.2 65 56.9
TWI36G1308 Tripterygium wilfordii HOM05D015010 ORTHO05D019384 4.9e-08 62.8 84 40.5
CANSAT35G1012 Cannabis sativa HOM05D027150 ORTHO05D028423 6.4e-08 62.4 84 40.5
BcaB03g16145 Brassica carinata HOM05D007458 ORTHO05D009533 8.3e-08 62.0 99 46.5
A04p11820 Brassica napus HOM05D003835 ORTHO05D004930 8.3e-08 62.0 86 41.9
BcaC02g10560 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-07 61.6 67 43.3
BcaB02g11022 Brassica carinata HOM05D007458 ORTHO05D009533 1.4e-07 61.2 63 57.1
BcaC04g20857 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-07 61.2 144 32.6
BcaB04g18217 Brassica carinata HOM05D007458 ORTHO05D009533 1.9e-07 60.8 58 51.7
BcaC01g02336 Brassica carinata HOM05D003835 ORTHO05D004930 1.9e-07 60.8 70 48.6
CSS0037614 Camellia sinensis var. sinensis HOM05D010739 ORTHO05D012209 2.4e-07 60.5 78 39.7
BolC9t56649H Brassica oleracea HOM05D007458 ORTHO05D009533 4.1e-07 59.7 41 73.2
CANSAT01G2276 Cannabis sativa HOM05D014149 ORTHO05D011451 4.1e-07 59.7 71 40.8
BcaC09g49877 Brassica carinata HOM05D003835 ORTHO05D004930 5.4e-07 59.3 125 32.0
C04p25680 Brassica napus HOM05D007458 ORTHO05D009533 5.4e-07 59.3 65 53.8
C05p50860 Brassica napus HOM05D007458 ORTHO05D009533 5.4e-07 59.3 61 55.7
TWI59G0099 Tripterygium wilfordii HOM05D011150 ORTHO05D011451 5.4e-07 59.3 183 30.1
TWI14G0077 Tripterygium wilfordii HOM05D015010 ORTHO05D000116 7.1e-07 58.9 78 38.5
BcaB05g23743 Brassica carinata HOM05D010120 ORTHO05D009533 9.2e-07 58.5 287 27.9
TWI36G1199 Tripterygium wilfordii HOM05D012521 ORTHO05D000116 1.2e-06 58.2 183 29.5
BcaB03g16648 Brassica carinata HOM05D007458 ORTHO05D009533 2.1e-06 57.4 293 25.9
BcaB02g11312 Brassica carinata HOM05D010120 ORTHO05D009533 2.7e-06 57.0 132 36.4
BcaB06g27201 Brassica carinata HOM05D007458 ORTHO05D009533 2.7e-06 57.0 38 68.4
BcaC01g02049 Brassica carinata HOM05D003835 ORTHO05D004930 2.7e-06 57.0 74 45.9
BraA05t21182Z Brassica rapa HOM05D003835 ORTHO05D004930 2.7e-06 57.0 128 38.3
CANSAT35G0823 Cannabis sativa HOM05D014149 ORTHO05D004930 2.7e-06 57.0 69 39.1
BcaC03g16532 Brassica carinata HOM05D007458 ORTHO05D009533 4.6e-06 56.2 36 77.8
BcaC07g37517 Brassica carinata HOM05D003835 ORTHO05D004930 4.6e-06 56.2 60 43.3
BcaC07g39533 Brassica carinata HOM05D003835 ORTHO05D004930 4.6e-06 56.2 161 30.4
BolC8t50199H Brassica oleracea HOM05D003835 ORTHO05D004930 6.0e-06 55.8 160 30.6
BcaB08g35088 Brassica carinata HOM05D009886 ORTHO05D009533 7.8e-06 55.5 68 51.5
BcaC02g10130 Brassica carinata HOM05D007458 ORTHO05D009533 7.8e-06 55.5 223 29.1
BcaC02g10732 Brassica carinata HOM05D003835 ORTHO05D004930 7.8e-06 55.5 95 36.8
BcaC03g17352 Brassica carinata HOM05D003835 ORTHO05D004930 7.8e-06 55.5 81 45.7
BcaC06g35964 Brassica carinata HOM05D003835 ORTHO05D004930 7.8e-06 55.5 130 33.1


User provided reference genes

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