Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g28640 Brassica carinata HOM05D000496 ORTHO05D014937 2.4e-82 308.9 174 100.0
BcaC09g49414 Brassica carinata HOM05D000496 ORTHO05D094999 9.7e-55 217.2 130 97.7
BcaC03g15107 Brassica carinata HOM05D000496 ORTHO05D000411 7.2e-50 201.1 186 68.3
BcaC02g09892 Brassica carinata HOM05D000496 ORTHO05D032642 8.0e-41 171.0 186 55.4
C04p35470 Brassica napus HOM05D000496 ORTHO05D032642 2.0e-39 166.4 162 58.6
BolC4t25099H Brassica oleracea HOM05D000496 ORTHO05D032642 4.4e-39 165.2 162 59.3
BraA01t03743Z Brassica rapa HOM05D000496 ORTHO05D019920 1.4e-32 143.7 172 54.1
BcaC08g46179 Brassica carinata HOM05D000496 ORTHO05D000411 6.8e-32 141.4 193 48.2
BolC2t08741H Brassica oleracea HOM05D000496 ORTHO05D019920 1.5e-31 140.2 186 52.2
BcaC03g15984 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-31 138.7 160 55.6
BcaC01g01905 Brassica carinata HOM05D000496 ORTHO05D014937 2.4e-29 132.9 180 45.0
BcaC08g47088 Brassica carinata HOM05D000496 ORTHO05D000411 3.1e-29 132.5 184 46.2
BcaB07g33420 Brassica carinata HOM05D000496 ORTHO05D014937 2.0e-28 129.8 169 46.7
BcaC02g10380 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-28 129.4 184 46.7
A05p20030 Brassica napus HOM05D000496 ORTHO05D014937 2.7e-28 129.4 155 47.7
BraA05t20909Z Brassica rapa HOM05D000496 ORTHO05D014937 2.7e-28 129.4 155 47.7
BcaC07g37461 Brassica carinata HOM05D000496 ORTHO05D014937 7.7e-28 127.9 180 44.4
BcaC03g14200 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-27 127.5 181 47.0
BcaC07g38782 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-27 127.1 186 44.1
BcaC04g22294 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-27 126.3 171 46.8
BcaC08g44039 Brassica carinata HOM05D000496 ORTHO05D014937 2.3e-27 126.3 185 43.8
BcaC01g03089 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-26 122.5 187 44.9
BcaC04g21671 Brassica carinata HOM05D000496 ORTHO05D000411 7.2e-26 121.3 187 44.4
BcaC05g28506 Brassica carinata HOM05D000496 ORTHO05D093697 3.6e-25 119.0 183 44.8
BcaC03g15709 Brassica carinata HOM05D000496 ORTHO05D000411 4.7e-25 118.6 184 45.1
BcaC03g16444 Brassica carinata HOM05D000496 ORTHO05D000411 6.1e-25 118.2 180 43.9
BolC5t33757H Brassica oleracea HOM05D000496 ORTHO05D014937 6.1e-25 118.2 185 43.2
A03p66750 Brassica napus HOM05D022631 ORTHO05D024363 2.3e-24 116.3 153 47.7
BcaC01g02163 Brassica carinata HOM05D000496 ORTHO05D000411 5.2e-24 115.2 171 42.7
BcaC03g15800 Brassica carinata HOM05D000496 ORTHO05D000411 6.8e-24 114.8 171 46.2
BcaC03g14607 Brassica carinata HOM05D000496 ORTHO05D031790 1.5e-23 113.6 182 42.3
BcaC04g22204 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-21 106.7 180 37.2
BcaB08g35328 Brassica carinata HOM05D000496 ORTHO05D000411 5.4e-21 105.1 164 42.1
BcaC06g36700 Brassica carinata HOM05D000496 ORTHO05D000411 7.0e-21 104.8 195 40.5
BolC9t59068H Brassica oleracea HOM05D000496 ORTHO05D014937 1.6e-20 103.6 187 40.6
BcaC03g17067 Brassica carinata HOM05D000496 ORTHO05D095706 1.0e-19 100.9 178 42.1
BcaC09g47909 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-19 99.8 166 42.8
BcaC08g43480 Brassica carinata HOM05D000496 ORTHO05D000411 6.6e-19 98.2 155 42.6
BcaC02g10520 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-18 97.1 175 41.1
BolC6t35943H Brassica oleracea HOM05D000496 ORTHO05D000411 2.5e-18 96.3 155 41.9
BolC8t49340H Brassica oleracea HOM05D000496 ORTHO05D014937 2.5e-18 96.3 145 42.8
BolC3t19004H Brassica oleracea HOM05D000496 ORTHO05D019920 3.3e-18 95.9 140 52.9
BcaC01g02264 Brassica carinata HOM05D000496 ORTHO05D019920 7.3e-18 94.7 140 52.1
BcaC09g50802 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-17 92.8 183 39.3
BolC7t43560H Brassica oleracea HOM05D000496 ORTHO05D039093 2.8e-17 92.8 186 39.2
BcaC01g02211 Brassica carinata HOM05D000496 ORTHO05D000411 3.6e-17 92.4 183 39.3
BcaC06g34334 Brassica carinata HOM05D000496 ORTHO05D039093 3.6e-17 92.4 186 39.2
BcaC01g01165 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-16 90.1 182 39.6
BcaC01g01239 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-16 89.7 183 36.1
BolC3t20864H Brassica oleracea HOM05D000496 ORTHO05D014937 2.3e-16 89.7 130 43.8
BcaC08g44837 Brassica carinata HOM05D000496 ORTHO05D000411 5.2e-16 88.6 192 32.3
BcaC08g43454 Brassica carinata HOM05D000496 ORTHO05D031880 6.8e-16 88.2 183 35.0
BolC5t33309H Brassica oleracea HOM05D000496 ORTHO05D039269 6.8e-16 88.2 155 41.3
BcaC01g05229 Brassica carinata HOM05D000496 ORTHO05D039269 8.9e-16 87.8 156 41.7
C08p18460 Brassica napus HOM05D000496 ORTHO05D042898 1.2e-15 87.4 133 43.6
BcaC06g33823 Brassica carinata HOM05D000496 ORTHO05D031880 1.5e-15 87.0 183 34.4
BolC9t55004H Brassica oleracea HOM05D000496 ORTHO05D014937 5.8e-15 85.1 146 40.4
BcaC08g45123 Brassica carinata HOM05D000496 ORTHO05D000411 7.5e-15 84.7 183 33.9
BcaC03g16242 Brassica carinata HOM05D030143 ORTHO05D002152 2.2e-14 83.2 147 38.8
BcaC03g16659 Brassica carinata HOM05D000496 ORTHO05D039733 3.7e-14 82.4 74 64.9
BcaC09g48708 Brassica carinata HOM05D000496 ORTHO05D000411 4.9e-14 82.0 63 69.8
BcaC09g48801 Brassica carinata HOM05D000496 ORTHO05D090764 4.9e-14 82.0 82 57.3
BraA09t39003Z Brassica rapa HOM05D000496 ORTHO05D039733 4.9e-14 82.0 98 54.1
BcaC06g36040 Brassica carinata HOM05D005496 ORTHO05D006677 8.3e-14 81.3 148 40.5
BcaC02g09460 Brassica carinata HOM05D000496 ORTHO05D014937 1.4e-13 80.5 160 40.6
BcaB06g27458 Brassica carinata HOM05D000496 ORTHO05D039111 1.8e-13 80.1 125 44.0
BolC4t26275H Brassica oleracea HOM05D000496 ORTHO05D039111 3.2e-13 79.3 125 44.0
BcaC03g14600 Brassica carinata HOM05D022631 ORTHO05D024363 2.0e-12 76.6 110 43.6
BolC4t26549H Brassica oleracea HOM05D000496 ORTHO05D000411 2.0e-12 76.6 191 34.0
BcaC08g44730 Brassica carinata HOM05D000496 ORTHO05D019920 3.5e-12 75.9 137 40.9
BcaC04g19440 Brassica carinata HOM05D000496 ORTHO05D000411 4.6e-12 75.5 181 30.9
BcaC09g49650 Brassica carinata HOM05D000496 ORTHO05D095876 6.0e-12 75.1 137 40.1
BcaC08g43453 Brassica carinata HOM05D000496 ORTHO05D031880 1.7e-11 73.6 148 33.8
BcaC04g19004 Brassica carinata HOM05D000496 ORTHO05D000411 5.0e-11 72.0 156 37.8
BolC7t41272H Brassica oleracea HOM05D000496 ORTHO05D000411 3.3e-10 69.3 149 38.9
BcaC01g01965 Brassica carinata HOM05D000496 ORTHO05D000411 9.5e-10 67.8 135 35.6
BcaC03g15417 Brassica carinata HOM05D000496 ORTHO05D000411 9.5e-10 67.8 185 33.5
BcaC04g23650 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-09 67.4 184 38.6
BcaC01g01876 Brassica carinata HOM05D000496 ORTHO05D000411 4.7e-09 65.5 51 72.5
BcaC09g49773 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-08 63.9 176 30.7
BcaC06g36694 Brassica carinata HOM05D000496 ORTHO05D094614 2.3e-08 63.2 117 37.6
BraA01t02806Z Brassica rapa HOM05D022631 ORTHO05D024363 4.0e-08 62.4 96 42.7
BcaB08g37273 Brassica carinata HOM05D000496 ORTHO05D000411 8.9e-08 61.2 135 37.8
BcaC01g03438 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-07 60.1 70 47.1
BcaNung03853 Brassica carinata HOM05D000496 ORTHO05D039941 3.4e-07 59.3 118 35.6
BolC2t08173H Brassica oleracea HOM05D022631 ORTHO05D024363 4.4e-07 58.9 96 40.6
BcaB06g27378 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-06 57.4 120 37.5
C02p20400 Brassica napus HOM05D022631 ORTHO05D024363 1.3e-06 57.4 96 39.6
BcaC09g48705 Brassica carinata HOM05D000496 ORTHO05D090570 4.9e-06 55.5 33 84.8


User provided reference genes

Program Settings