Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g28639 Brassica carinata HOM05D000496 ORTHO05D000411 4.6e-45 184.1 88 100.0
BcaC04g21194 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-34 148.3 85 80.0
BcaC03g15984 Brassica carinata HOM05D000496 ORTHO05D000411 9.3e-30 133.3 66 90.9
BcaC03g15800 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-29 132.1 66 87.9
BcaC02g09892 Brassica carinata HOM05D000496 ORTHO05D032642 2.7e-29 131.7 66 89.4
C04p35470 Brassica napus HOM05D000496 ORTHO05D032642 2.7e-29 131.7 66 89.4
BolC4t25099H Brassica oleracea HOM05D000496 ORTHO05D032642 2.7e-29 131.7 66 89.4
BcaC08g46179 Brassica carinata HOM05D000496 ORTHO05D000411 4.3e-27 124.4 66 81.8
C09p21780 Brassica napus HOM05D000496 ORTHO05D000411 2.8e-26 121.7 85 71.8
BcaC09g48800 Brassica carinata HOM05D000496 ORTHO05D000411 6.2e-26 120.6 87 63.2
BcaC03g15107 Brassica carinata HOM05D000496 ORTHO05D000411 8.2e-26 120.2 66 84.8
BcaC06g36700 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-25 118.6 66 78.8
BcaC01g01165 Brassica carinata HOM05D000496 ORTHO05D000411 5.3e-25 117.5 66 77.3
BcaC03g15417 Brassica carinata HOM05D000496 ORTHO05D000411 4.5e-24 114.4 66 71.2
BcaB08g35328 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-23 112.8 67 71.6
BcaC08g44837 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-23 112.5 66 72.7
BcaC03g17066 Brassica carinata HOM05D000496 ORTHO05D032289 2.9e-23 111.7 67 73.1
BcaC04g19440 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-23 111.3 80 65.0
BraA09t39002Z Brassica rapa HOM05D000496 ORTHO05D000411 8.4e-23 110.2 73 69.9
BcaC09g49480 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-22 109.8 66 71.2
BcaC09g50802 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-22 109.8 66 72.7
BolC2t10251H Brassica oleracea HOM05D000496 ORTHO05D000411 2.5e-22 108.6 66 72.7
BcaC06g35070 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-22 108.2 74 68.9
BcaC08g47088 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-22 108.2 66 74.2
BcaC01g03438 Brassica carinata HOM05D000496 ORTHO05D000411 9.3e-22 106.7 66 77.3
BcaC04g19004 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-21 105.1 65 72.3
C09p62330 Brassica napus HOM05D058036 ORTHO05D032289 2.7e-21 105.1 65 72.3
BcaC01g02163 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-21 104.8 67 70.1
BcaC08g43480 Brassica carinata HOM05D000496 ORTHO05D000411 4.6e-21 104.4 66 72.7
BcaC06g34564 Brassica carinata HOM05D000496 ORTHO05D000411 6.1e-21 104.0 66 68.2
BolC6t39184H Brassica oleracea HOM05D000496 ORTHO05D000411 7.9e-21 103.6 49 85.7
BcaC07g38782 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-20 102.8 85 57.6
BcaC03g16444 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-20 102.4 66 75.8
BcaC01g03089 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-20 102.1 66 75.8
BcaC03g15709 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-20 102.1 97 53.6
BolC3t17901H Brassica oleracea HOM05D000496 ORTHO05D000411 2.3e-20 102.1 66 75.8
BcaB01g02810 Brassica carinata HOM05D000496 ORTHO05D000411 3.0e-20 101.7 68 66.2
BcaC02g10520 Brassica carinata HOM05D000496 ORTHO05D000411 3.0e-20 101.7 66 68.2
BcaC01g02150 Brassica carinata HOM05D000496 ORTHO05D000411 5.1e-20 100.9 50 84.0
BcaC09g48334 Brassica carinata HOM05D000496 ORTHO05D000411 4.3e-19 97.8 85 54.1
BolC7t44304H Brassica oleracea HOM05D000496 ORTHO05D027466 4.3e-19 97.8 63 68.3
BcaC08g43453 Brassica carinata HOM05D000496 ORTHO05D031880 5.7e-19 97.4 66 63.6
BcaC08g43454 Brassica carinata HOM05D000496 ORTHO05D031880 5.7e-19 97.4 66 63.6
BcaB04g17732 Brassica carinata HOM05D000496 ORTHO05D000411 7.4e-19 97.1 70 58.6
BcaC08g45123 Brassica carinata HOM05D000496 ORTHO05D000411 7.4e-19 97.1 66 65.2
BcaB04g17691 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-18 96.3 86 60.5
BcaB08g35848 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-18 95.5 83 61.4
BcaC08g44039 Brassica carinata HOM05D000496 ORTHO05D014937 2.2e-18 95.5 66 62.1
BcaB06g26381 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-18 94.7 65 67.7
BcaC04g22294 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-18 94.7 74 58.1
BcaB06g28121 Brassica carinata HOM05D000496 ORTHO05D000411 8.2e-18 93.6 65 67.7
BolC9t55777H Brassica oleracea HOM05D000496 ORTHO05D000411 1.8e-17 92.4 67 71.6
BolC1t05084H Brassica oleracea HOM05D000496 ORTHO05D000411 3.1e-17 91.7 77 55.8
BolSC21t60240H Brassica oleracea HOM05D000496 ORTHO05D000411 4.1e-17 91.3 64 62.5
BcaB03g14222 Brassica carinata HOM05D000496 ORTHO05D000411 6.9e-17 90.5 69 60.9
BcaB04g17470 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-16 89.7 69 60.9
C06p14200 Brassica napus HOM05D000496 ORTHO05D000411 1.2e-16 89.7 77 53.2
BcaB05g23273 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-16 89.0 65 66.2
BcaB06g26352 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-16 88.2 69 60.9
BcaC04g21671 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-16 88.2 59 72.9
BcaC06g36471 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-16 88.2 66 60.6
BcaC06g36711 Brassica carinata HOM05D000496 ORTHO05D000411 7.7e-16 87.0 59 66.1
BcaC01g00534 Brassica carinata HOM05D000020 ORTHO05D000543 1.3e-15 86.3 86 54.7
BcaC02g08910 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-15 86.3 66 62.1
BcaC02g10789 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-15 85.9 66 60.6
BcaC05g27417 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-15 85.9 66 62.1
BcaC05g26989 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-15 85.5 83 55.4
BcaC09g49110 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-15 85.5 76 55.3
BcaNung02816 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-15 85.5 83 55.4
BcaC05g27815 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-15 85.1 66 62.1
BcaC01g02211 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-15 84.7 96 44.8
BcaC02g10837 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-15 84.7 63 58.7
C05p49720 Brassica napus HOM05D000496 ORTHO05D000411 5.0e-15 84.3 66 60.6
BcaB06g26647 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-14 83.2 71 59.2
BcaC05g30568 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-14 83.2 66 60.6
BcaB07g32484 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-14 82.4 64 60.9
BcaC09g47909 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-14 81.6 67 62.7
BcaB01g02232 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-14 81.3 66 57.6
BcaC05g28121 Brassica carinata HOM05D000496 ORTHO05D039070 4.2e-14 81.3 76 55.3
BcaC04g23033 Brassica carinata HOM05D000496 ORTHO05D000411 7.2e-14 80.5 73 54.8
BcaNung04301 Brassica carinata HOM05D000496 ORTHO05D000411 9.4e-14 80.1 60 61.7
BcaC04g20576 Brassica carinata HOM05D000496 ORTHO05D039987 1.2e-13 79.7 44 77.3
BcaC07g38016 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-13 79.3 65 60.0
BolC8t48398H Brassica oleracea HOM05D000496 ORTHO05D000411 1.6e-13 79.3 65 60.0
A05p19890 Brassica napus HOM05D000496 ORTHO05D000411 2.1e-13 79.0 65 60.0
BraA01t02446Z Brassica rapa HOM05D000496 ORTHO05D000411 2.1e-13 79.0 65 60.0
BcaB01g03110 Brassica carinata HOM05D000496 ORTHO05D000411 4.6e-13 77.8 66 59.1
BcaC03g15569 Brassica carinata HOM05D000496 ORTHO05D000411 4.6e-13 77.8 66 57.6
BcaC07g37237 Brassica carinata HOM05D000496 ORTHO05D000411 4.6e-13 77.8 65 55.4
BcaC07g39538 Brassica carinata HOM05D000496 ORTHO05D000411 7.9e-13 77.0 72 51.4
BcaC01g00867 Brassica carinata HOM05D010392 ORTHO05D040019 1.0e-12 76.6 83 50.6
BcaC06g35766 Brassica carinata HOM05D000496 ORTHO05D000411 6.7e-12 73.9 71 52.1
BcaC03g14200 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-11 73.2 66 54.5
Sp7g09260 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.1e-09 66.6 61 55.7
Thhalv10019512m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.8e-09 65.9 59 54.2
BcaB04g17268 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-09 65.5 36 75.0
BcaC02g10380 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-09 65.5 47 68.1
Thhalv10011992m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.4e-09 65.5 59 52.5
Thhalv10017779m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 3.1e-09 65.1 47 61.7
BcaC03g14957 Brassica carinata HOM05D000496 ORTHO05D000411 5.3e-09 64.3 47 61.7
Thhalv10005260m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 5.3e-09 64.3 78 47.4
Thhalv10015514m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 5.3e-09 64.3 69 44.9
BcaC03g14601 Brassica carinata HOM05D000496 ORTHO05D027466 9.1e-09 63.5 44 59.1
BolC2t08174H Brassica oleracea HOM05D000496 ORTHO05D027466 9.1e-09 63.5 44 59.1
BcaC01g01817 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-08 63.2 63 52.4
Thhalv10002297m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 3.4e-08 61.6 47 59.6
Thhalv10015762m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 3.4e-08 61.6 47 59.6
BcaC06g36146 Brassica carinata HOM05D000496 ORTHO05D000411 4.5e-08 61.2 55 54.5
BcaNung03852 Brassica carinata HOM05D000496 ORTHO05D000411 4.5e-08 61.2 47 61.7
Thhalv10012321m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 5.9e-08 60.8 85 38.8
Carub.0003s2750 Capsella rubella HOM05D000496 ORTHO05D000411 7.7e-08 60.5 46 60.9
Thhalv10002827m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 7.7e-08 60.5 85 38.8
Carub.0001s1088 Capsella rubella HOM05D000496 ORTHO05D000411 1.3e-07 59.7 46 52.2
Carub.0003s2772 Capsella rubella HOM05D000496 ORTHO05D000411 1.3e-07 59.7 48 60.4
Carub.0007s3157 Capsella rubella HOM05D000496 ORTHO05D000411 1.7e-07 59.3 46 54.3
CARHR261370 Cardamine hirsuta HOM05D000496 ORTHO05D000411 1.7e-07 59.3 47 57.4
Sp6g04550 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.7e-07 59.3 70 44.3
Thhalv10011945m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.2e-07 58.9 70 45.7
Thhalv10019737m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.2e-07 58.9 70 44.3
Sp1g16530 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.9e-07 58.5 59 52.5
BcaC03g14607 Brassica carinata HOM05D000496 ORTHO05D031790 3.8e-07 58.2 78 44.9
Thhalv10015686m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 3.8e-07 58.2 63 47.6
Carub.0004s0523 Capsella rubella HOM05D000496 ORTHO05D000411 6.5e-07 57.4 63 49.2
Thhalv10001142m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.1e-06 56.6 47 53.2
Sp2g05200 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.1e-06 56.6 46 50.0
Thhalv10009841m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.4e-06 56.2 41 63.4
Sp1g32360 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.4e-06 56.2 57 50.9
CARHR180340 Cardamine hirsuta HOM05D000496 ORTHO05D000411 1.9e-06 55.8 60 50.0
Sp4g08700 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.9e-06 55.8 47 57.4
Sp5g17520 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.9e-06 55.8 48 54.2
AL6G45480 Arabidopsis lyrata HOM05D000496 ORTHO05D000411 2.5e-06 55.5 42 57.1
Sp1g33990 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.5e-06 55.5 83 37.3
Sp7g08940 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.5e-06 55.5 60 46.7
SpUn0001_0770 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.5e-06 55.5 42 57.1
Carub.0007s3143 Capsella rubella HOM05D000496 ORTHO05D000411 3.2e-06 55.1 62 41.9
Carub.0008s1087 Capsella rubella HOM05D000496 ORTHO05D000411 3.2e-06 55.1 48 52.1
Thhalv10022993m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 3.2e-06 55.1 63 47.6
Sp6g04730 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.2e-06 54.7 58 46.6
Sp7g08130 Schrenkiella parvula HOM05D000496 ORTHO05D000411 5.5e-06 54.3 44 54.5
Sp7g10700 Schrenkiella parvula HOM05D000496 ORTHO05D000411 7.2e-06 53.9 68 44.1
Carub.0004s0616 Capsella rubella HOM05D000496 ORTHO05D000411 9.4e-06 53.5 48 52.1
Thhalv10003335m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 9.4e-06 53.5 56 46.4


User provided reference genes

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