Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g28543 Brassica carinata HOM05D015374 ORTHO05D000724 8.6e-92 340.5 198 100.0
BcaC05g28540 Brassica carinata HOM05D015374 ORTHO05D000724 2.7e-53 212.6 189 76.2
BolC5t33336H Brassica oleracea HOM05D015374 ORTHO05D000724 7.4e-43 177.9 194 58.2
BcaC05g28544 Brassica carinata HOM05D015374 ORTHO05D000724 8.2e-42 174.5 194 58.2
A05p30470 Brassica napus HOM05D015374 ORTHO05D000724 2.4e-41 172.9 194 58.2
BraA05t21886Z Brassica rapa HOM05D015374 ORTHO05D000724 1.6e-37 160.2 215 52.6
C05p46100 Brassica napus HOM05D015374 ORTHO05D000724 4.7e-37 158.7 223 50.7
BcaB06g25968 Brassica carinata HOM05D015374 ORTHO05D000724 3.8e-31 139.0 154 60.4
Sp3g17220 Schrenkiella parvula HOM05D000988 ORTHO05D000724 1.8e-20 103.6 203 44.3
Thhalv10021551m.g Eutrema salsugineum HOM05D000988 ORTHO05D000724 5.4e-17 92.0 216 38.4
BcaC01g03647 Brassica carinata HOM05D000988 ORTHO05D000724 1.2e-16 90.9 194 50.0
C03p50140 Brassica napus HOM05D000988 ORTHO05D000724 1.2e-16 90.9 194 50.0
BolC3t17307H Brassica oleracea HOM05D000988 ORTHO05D000724 1.2e-16 90.9 194 50.0
AT3G19150 Arabidopsis thaliana HOM05D000988 ORTHO05D000724 2.7e-16 89.7 221 39.8
BraA03t13265Z Brassica rapa HOM05D000988 ORTHO05D000724 2.5e-14 83.2 213 46.5
A03p41080 Brassica napus HOM05D000988 ORTHO05D000724 2.3e-12 76.6 137 44.5
BcaB04g19027 Brassica carinata HOM05D000988 ORTHO05D000724 9.8e-11 71.2 136 44.1
Aa31LG8G5930 Aethionema arabicum HOM05D000988 ORTHO05D000724 7.7e-08 61.6 212 32.5
AL3G32520 Arabidopsis lyrata HOM05D000988 ORTHO05D000724 1.0e-07 61.2 215 36.3
Carub.0003s1897 Capsella rubella HOM05D000988 ORTHO05D000724 2.9e-07 59.7 143 38.5
CARHR094550 Cardamine hirsuta HOM05D000988 ORTHO05D000724 3.8e-07 59.3 200 35.5


User provided reference genes

Program Settings