Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g28506 Brassica carinata HOM05D000496 ORTHO05D093697 1.5e-133 479.6 254 100.0
BcaC09g47909 Brassica carinata HOM05D000496 ORTHO05D000411 5.5e-91 338.2 255 76.1
BolC5t33309H Brassica oleracea HOM05D000496 ORTHO05D039269 4.0e-73 278.9 149 100.0
BcaC01g05229 Brassica carinata HOM05D000496 ORTHO05D039269 2.3e-65 253.1 149 90.6
BcaC03g14607 Brassica carinata HOM05D000496 ORTHO05D031790 3.6e-42 176.0 249 48.2
BcaC03g15107 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-38 164.1 244 45.9
BcaC06g36700 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-36 157.9 274 43.1
BcaC02g09892 Brassica carinata HOM05D000496 ORTHO05D032642 5.1e-36 155.6 248 44.4
BcaC09g50802 Brassica carinata HOM05D000496 ORTHO05D000411 8.6e-36 154.8 265 43.4
BcaC08g44837 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-34 150.2 250 43.2
BcaC08g43454 Brassica carinata HOM05D000496 ORTHO05D031880 3.6e-34 149.4 263 44.9
BcaC04g22204 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-33 147.1 218 44.0
BcaC01g02211 Brassica carinata HOM05D000496 ORTHO05D000411 8.9e-33 144.8 266 42.5
BcaC08g45123 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-32 144.1 263 44.1
C04p35470 Brassica napus HOM05D000496 ORTHO05D032642 1.3e-31 141.0 235 43.4
BcaC08g46179 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-31 140.6 250 41.2
BcaC01g03089 Brassica carinata HOM05D000496 ORTHO05D000411 4.9e-31 139.0 241 44.0
BcaC01g01239 Brassica carinata HOM05D000496 ORTHO05D000411 6.4e-31 138.7 215 45.1
BolC4t25099H Brassica oleracea HOM05D000496 ORTHO05D032642 6.4e-31 138.7 231 42.0
BcaC06g33823 Brassica carinata HOM05D000496 ORTHO05D031880 9.2e-30 134.8 237 45.6
BcaC04g21671 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-29 134.0 239 41.8
BcaC02g10380 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-29 133.3 243 41.6
BcaC03g17067 Brassica carinata HOM05D000496 ORTHO05D095706 2.7e-29 133.3 255 41.2
BcaC03g16444 Brassica carinata HOM05D000496 ORTHO05D000411 4.6e-29 132.5 241 44.0
BcaC01g01165 Brassica carinata HOM05D000496 ORTHO05D000411 5.1e-28 129.0 276 38.4
BcaC01g01905 Brassica carinata HOM05D000496 ORTHO05D014937 1.9e-27 127.1 253 41.1
BcaC06g34334 Brassica carinata HOM05D000496 ORTHO05D039093 1.9e-27 127.1 248 40.7
BolC7t43560H Brassica oleracea HOM05D000496 ORTHO05D039093 1.9e-27 127.1 248 40.7
BcaC02g10520 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-27 126.3 250 40.8
BcaC04g19440 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-26 124.0 260 38.1
BcaC06g36040 Brassica carinata HOM05D005496 ORTHO05D006677 3.6e-26 122.9 158 46.8
BcaC08g47088 Brassica carinata HOM05D000496 ORTHO05D000411 4.7e-26 122.5 252 40.1
BcaC08g44039 Brassica carinata HOM05D000496 ORTHO05D014937 6.2e-26 122.1 246 40.2
BcaB07g33420 Brassica carinata HOM05D000496 ORTHO05D014937 1.1e-25 121.3 197 43.1
BcaC03g14200 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-25 121.3 254 40.2
BcaC03g15800 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-25 120.2 250 39.6
BcaB08g35328 Brassica carinata HOM05D000496 ORTHO05D000411 5.2e-25 119.0 229 42.4
BolC4t26549H Brassica oleracea HOM05D000496 ORTHO05D000411 1.2e-24 117.9 224 40.2
BcaC04g22294 Brassica carinata HOM05D000496 ORTHO05D000411 2.6e-24 116.7 263 37.3
BcaC03g15417 Brassica carinata HOM05D000496 ORTHO05D000411 7.6e-24 115.2 249 40.6
BcaC05g28640 Brassica carinata HOM05D000496 ORTHO05D014937 7.6e-24 115.2 183 44.8
A05p20030 Brassica napus HOM05D000496 ORTHO05D014937 9.9e-24 114.8 245 39.6
BraA05t20909Z Brassica rapa HOM05D000496 ORTHO05D014937 9.9e-24 114.8 245 39.6
BcaC03g15709 Brassica carinata HOM05D000496 ORTHO05D000411 4.9e-23 112.5 261 39.1
BolC9t59068H Brassica oleracea HOM05D000496 ORTHO05D014937 8.4e-23 111.7 202 41.6
BcaC07g37461 Brassica carinata HOM05D000496 ORTHO05D014937 1.4e-22 110.9 219 39.7
BolC5t33757H Brassica oleracea HOM05D000496 ORTHO05D014937 3.2e-22 109.8 249 38.2
BcaC01g02163 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-21 106.3 237 38.4
BolC7t41272H Brassica oleracea HOM05D000496 ORTHO05D000411 1.0e-20 104.8 154 46.1
BraA01t03743Z Brassica rapa HOM05D000496 ORTHO05D019920 1.7e-20 104.0 178 41.6
BcaC08g43453 Brassica carinata HOM05D000496 ORTHO05D031880 3.0e-20 103.2 217 39.6
BcaC08g43480 Brassica carinata HOM05D000496 ORTHO05D000411 3.0e-20 103.2 263 36.9
BolC6t35943H Brassica oleracea HOM05D000496 ORTHO05D000411 6.6e-20 102.1 263 36.5
BcaC01g01965 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-19 101.3 135 49.6
BcaC07g38782 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-19 100.5 215 38.1
BcaC03g15984 Brassica carinata HOM05D000496 ORTHO05D000411 3.6e-18 96.3 244 37.7
BolC3t19004H Brassica oleracea HOM05D000496 ORTHO05D019920 3.6e-18 96.3 138 50.7
BcaC01g02264 Brassica carinata HOM05D000496 ORTHO05D019920 8.1e-18 95.1 138 50.0
C08p18460 Brassica napus HOM05D000496 ORTHO05D042898 8.1e-18 95.1 179 37.4
BolC2t08741H Brassica oleracea HOM05D000496 ORTHO05D019920 6.9e-17 92.0 177 40.1
BcaC09g48801 Brassica carinata HOM05D000496 ORTHO05D090764 9.0e-17 91.7 183 38.3
BcaC09g49650 Brassica carinata HOM05D000496 ORTHO05D095876 9.0e-17 91.7 227 36.6
BcaC09g49773 Brassica carinata HOM05D000496 ORTHO05D000411 9.0e-17 91.7 247 36.0
BcaC06g36694 Brassica carinata HOM05D000496 ORTHO05D094614 7.6e-16 88.6 110 48.2
A03p66750 Brassica napus HOM05D022631 ORTHO05D024363 2.2e-15 87.0 143 44.8
BcaC04g23650 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-14 84.0 211 35.1
BcaC09g49414 Brassica carinata HOM05D000496 ORTHO05D094999 4.2e-14 82.8 140 43.6
BcaNung02556 Brassica carinata HOM05D000496 ORTHO05D095281 1.6e-13 80.9 100 50.0
BolC9t55084H Brassica oleracea HOM05D020706 ORTHO05D032392 2.1e-13 80.5 204 37.7
BcaC09g50172 Brassica carinata HOM05D025630 ORTHO05D032542 4.6e-13 79.3 169 36.7
BcaC06g35493 Brassica carinata HOM05D010392 ORTHO05D000411 6.7e-12 75.5 261 32.2
BcaB03g14222 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-11 73.2 246 28.5
BcaC08g44730 Brassica carinata HOM05D000496 ORTHO05D019920 3.3e-11 73.2 134 42.5
BcaC02g09460 Brassica carinata HOM05D000496 ORTHO05D014937 5.6e-11 72.4 218 33.5
BcaB06g26444 Brassica carinata HOM05D000496 ORTHO05D091650 1.3e-10 71.2 211 29.4
BcaB06g27378 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-10 71.2 203 36.5
BcaB08g37273 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-10 71.2 229 32.3
BcaNung04301 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-10 70.5 252 32.9
BcaC05g27902 Brassica carinata HOM05D000496 ORTHO05D000411 3.6e-10 69.7 264 31.8
BcaC04g19004 Brassica carinata HOM05D000496 ORTHO05D000411 8.1e-10 68.6 148 39.2
C04p23060 Brassica napus HOM05D000496 ORTHO05D019920 1.4e-09 67.8 88 52.3
BolC7t42802H Brassica oleracea HOM05D000496 ORTHO05D104510 9.0e-09 65.1 100 45.0
BolC8t49340H Brassica oleracea HOM05D000496 ORTHO05D014937 2.6e-08 63.5 134 38.8
BcaB05g23273 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-08 63.2 220 30.0
BcaC03g16242 Brassica carinata HOM05D030143 ORTHO05D002152 3.4e-08 63.2 146 34.2
BcaB04g17470 Brassica carinata HOM05D000496 ORTHO05D000411 4.5e-08 62.8 246 30.1
BcaB06g27458 Brassica carinata HOM05D000496 ORTHO05D039111 4.5e-08 62.8 124 37.9
BcaC05g27417 Brassica carinata HOM05D000496 ORTHO05D000411 4.5e-08 62.8 232 30.2
BcaC03g16658 Brassica carinata HOM05D000496 ORTHO05D091611 5.8e-08 62.4 86 45.3
BcaC09g49110 Brassica carinata HOM05D000496 ORTHO05D000411 5.8e-08 62.4 270 26.3
BolC4t26275H Brassica oleracea HOM05D000496 ORTHO05D039111 5.8e-08 62.4 124 37.9
BcaC01g03438 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-07 60.8 238 32.4
BcaC07g37066 Brassica carinata HOM05D000496 ORTHO05D039815 8.4e-07 58.5 267 27.0
BcaC03g14600 Brassica carinata HOM05D022631 ORTHO05D024363 1.1e-06 58.2 108 43.5
BcaC03g14957 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-06 58.2 105 40.0
BolC3t20864H Brassica oleracea HOM05D000496 ORTHO05D014937 3.2e-06 56.6 127 38.6
BolC2t10251H Brassica oleracea HOM05D000496 ORTHO05D000411 7.1e-06 55.5 63 49.2


User provided reference genes

Program Settings