Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g28457 Brassica carinata HOM05D007818 ORTHO05D014962 1.0e-129 466.8 247 100.0
BcaC05g26853 Brassica carinata HOM05D007818 ORTHO05D011878 6.1e-119 431.0 244 91.8
C05p45450 Brassica napus HOM05D007818 ORTHO05D014962 6.1e-111 404.4 223 95.5
BolC8t47206H Brassica oleracea HOM05D007818 ORTHO05D014962 6.7e-110 401.0 220 94.1
BraA03t15277Z Brassica rapa HOM05D007818 ORTHO05D014962 2.2e-100 369.4 207 92.8
C07p11950 Brassica napus HOM05D007818 ORTHO05D015522 1.0e-97 360.5 194 94.8
C04p35200 Brassica napus HOM05D007818 ORTHO05D015522 8.5e-97 357.5 194 93.8
C05p37820 Brassica napus HOM05D007818 ORTHO05D014962 7.2e-96 354.4 194 93.8
C01p41510 Brassica napus HOM05D007818 ORTHO05D015522 1.8e-94 349.7 194 92.8
BraA06t25340Z Brassica rapa HOM05D007818 ORTHO05D015522 6.8e-94 347.8 194 92.8
A01p25450 Brassica napus HOM05D007818 ORTHO05D015522 8.8e-94 347.4 193 93.3
BraA01t01576Z Brassica rapa HOM05D007818 ORTHO05D015522 8.3e-92 340.9 194 90.7
BraA01t02469Z Brassica rapa HOM05D007818 ORTHO05D015522 8.3e-92 340.9 215 84.7
BcaC06g35774 Brassica carinata HOM05D007818 ORTHO05D014962 1.7e-89 333.2 214 83.6
BolC8t49596H Brassica oleracea HOM05D007818 ORTHO05D014962 9.8e-85 317.4 190 89.5
C04p05460 Brassica napus HOM05D007818 ORTHO05D014962 1.8e-83 313.2 173 92.5
C06p26590 Brassica napus HOM05D007818 ORTHO05D015522 5.4e-83 311.6 172 92.4
A07p05920 Brassica napus HOM05D007818 ORTHO05D015522 5.9e-82 308.1 194 85.6
BolC7t41573H Brassica oleracea HOM05D007818 ORTHO05D015522 1.3e-81 307.0 171 91.2
BolC6t35450H Brassica oleracea HOM05D007818 ORTHO05D015522 7.5e-77 291.2 168 89.3
C05p18330 Brassica napus HOM05D007818 ORTHO05D014962 7.0e-75 284.6 161 91.3
BcaC05g27619 Brassica carinata HOM05D007818 ORTHO05D011878 1.4e-67 260.4 143 93.7
C05p36060 Brassica napus HOM05D007818 ORTHO05D015522 1.4e-67 260.4 143 93.7
BcaB07g33943 Brassica carinata HOM05D007818 ORTHO05D091954 4.1e-67 258.8 215 64.7
C04p47800 Brassica napus HOM05D007818 ORTHO05D014962 6.0e-58 228.4 194 67.5
BolC4t26382H Brassica oleracea HOM05D007818 ORTHO05D014962 2.6e-45 186.4 118 83.9
BcaB05g23796 Brassica carinata HOM05D007818 ORTHO05D092076 4.9e-44 182.2 223 51.1
C07p08970 Brassica napus HOM05D007818 ORTHO05D011878 4.9e-44 182.2 97 95.9
BolC7t41108H Brassica oleracea HOM05D007818 ORTHO05D014962 2.7e-42 176.4 107 86.0
BcaB03g16367 Brassica carinata HOM05D007818 ORTHO05D094448 3.9e-41 172.6 132 68.2
BcaC06g35694 Brassica carinata HOM05D007818 ORTHO05D014962 9.6e-40 167.9 128 71.1
BolC6t36717H Brassica oleracea HOM05D007818 ORTHO05D011878 5.6e-32 142.1 82 89.0
BcaC02g11123 Brassica carinata HOM05D007818 ORTHO05D092278 1.4e-30 137.5 77 92.2
C05p27330 Brassica napus HOM05D001379 ORTHO05D001277 1.9e-27 127.1 73 93.2
C07p01150 Brassica napus HOM05D001379 ORTHO05D001277 4.2e-27 125.9 74 90.5
C03p58240 Brassica napus HOM05D001379 ORTHO05D001277 6.0e-26 122.1 76 88.2
C06p04890 Brassica napus HOM05D007818 ORTHO05D011878 1.1e-24 117.9 60 100.0
BcaC05g25879 Brassica carinata HOM05D007818 ORTHO05D094877 5.6e-24 115.5 120 62.5
C02p15660 Brassica napus HOM05D007818 ORTHO05D011878 1.3e-17 94.4 53 90.6
C07p08870 Brassica napus HOM05D017856 ORTHO05D096562 8.4e-12 75.1 120 39.2
C06p04830 Brassica napus HOM05D001379 ORTHO05D001277 2.5e-11 73.6 42 88.1
BolC5t32989H Brassica oleracea HOM05D007818 ORTHO05D011878 5.5e-11 72.4 36 97.2
BcaB06g26472 Brassica carinata HOM05D007818 ORTHO05D092505 1.2e-10 71.2 115 41.7
BolC9t59179H Brassica oleracea HOM05D007818 ORTHO05D011878 1.2e-10 71.2 34 100.0
BcaB06g27139 Brassica carinata HOM05D007818 ORTHO05D092592 1.6e-10 70.9 79 51.9
BcaB06g25738 Brassica carinata HOM05D007818 ORTHO05D091088 2.1e-10 70.5 77 51.9
BcaB05g24680 Brassica carinata HOM05D007818 ORTHO05D095925 7.9e-10 68.6 68 54.4
BcaC09g48600 Brassica carinata HOM05D007818 ORTHO05D032463 6.7e-09 65.5 45 80.0
BcaB07g33514 Brassica carinata HOM05D007818 ORTHO05D093486 5.7e-08 62.4 80 55.0
BcaB04g17702 Brassica carinata HOM05D007818 ORTHO05D096147 7.4e-08 62.0 60 53.3
BcaB07g33164 Brassica carinata HOM05D013390 ORTHO05D094474 3.7e-07 59.7 218 31.7
BcaC09g49196 Brassica carinata HOM05D007818 ORTHO05D039431 8.2e-07 58.5 99 46.5
BcaC02g11930 Brassica carinata HOM05D000305 ORTHO05D000065 1.8e-06 57.4 219 33.3


User provided reference genes

Program Settings