Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g28456 Brassica carinata HOM05D007011 ORTHO05D008837 2.4e-178 628.6 302 100.0
C06p04860 Brassica napus HOM05D007011 ORTHO05D008837 4.0e-165 584.7 312 92.0
BcaC05g27620 Brassica carinata HOM05D007011 ORTHO05D008837 4.4e-164 581.3 312 92.3
C05p36090 Brassica napus HOM05D007011 ORTHO05D008837 4.4e-164 581.3 312 92.3
C04p55380 Brassica napus HOM05D007011 ORTHO05D008837 2.9e-163 578.6 312 92.3
C03p58260 Brassica napus HOM05D007011 ORTHO05D008837 8.4e-163 577.0 312 91.7
C07p11040 Brassica napus HOM05D007011 ORTHO05D008837 9.3e-162 573.5 312 92.0
C07p11970 Brassica napus HOM05D007011 ORTHO05D008837 1.5e-159 566.2 305 91.1
C05p27360 Brassica napus HOM05D007011 ORTHO05D008837 2.0e-156 555.8 302 91.7
BcaC02g12297 Brassica carinata HOM05D007011 ORTHO05D008837 2.8e-150 535.4 312 86.5
BcaC06g35773 Brassica carinata HOM05D007011 ORTHO05D008837 6.0e-145 517.7 312 84.6
BcaB06g27203 Brassica carinata HOM05D007011 ORTHO05D008837 1.2e-132 476.9 297 79.1
BcaB04g16982 Brassica carinata HOM05D007011 ORTHO05D008837 5.5e-130 468.0 310 74.2
BcaB05g24511 Brassica carinata HOM05D007011 ORTHO05D008837 1.1e-127 460.3 304 74.3
BolC6t35445H Brassica oleracea HOM05D007011 ORTHO05D008837 3.3e-119 432.2 279 79.2
A07p05900 Brassica napus HOM05D007011 ORTHO05D008837 5.7e-111 404.8 269 77.3
C04p47830 Brassica napus HOM05D007011 ORTHO05D008837 2.6e-108 396.0 279 75.3
BraA06t25341Z Brassica rapa HOM05D007011 ORTHO05D008837 1.6e-105 386.7 279 73.1
BolC5t33266H Brassica oleracea HOM05D007011 ORTHO05D008837 2.4e-101 372.9 221 84.6
C01p48060 Brassica napus HOM05D007011 ORTHO05D008837 5.5e-98 361.7 197 89.8
BcaB07g33137 Brassica carinata HOM05D007011 ORTHO05D008837 6.3e-94 348.2 252 65.9
BcaC05g26483 Brassica carinata HOM05D007011 ORTHO05D008837 4.2e-90 335.5 274 59.9
BcaC06g36231 Brassica carinata HOM05D007011 ORTHO05D008837 7.5e-79 298.1 245 58.8
BraA01t02471Z Brassica rapa HOM05D007011 ORTHO05D008837 4.9e-78 295.4 223 70.4
BcaB01g01187 Brassica carinata HOM05D007011 ORTHO05D008837 6.8e-72 275.0 155 84.5
BcaB04g17596 Brassica carinata HOM05D007011 ORTHO05D008837 7.8e-68 261.5 155 79.4
C04p05480 Brassica napus HOM05D007011 ORTHO05D008837 1.5e-66 257.3 159 83.6
BcaB05g23795 Brassica carinata HOM05D007011 ORTHO05D008837 5.6e-66 255.4 171 73.7
C05p45430 Brassica napus HOM05D007011 ORTHO05D008837 2.2e-62 243.4 124 91.1
BcaB01g01040 Brassica carinata HOM05D007011 ORTHO05D008837 2.9e-62 243.0 173 72.3
BcaC06g36116 Brassica carinata HOM05D007011 ORTHO05D008837 3.7e-62 242.7 153 73.2
C01p11610 Brassica napus HOM05D007011 ORTHO05D008837 2.3e-59 233.4 267 45.7
BcaB05g22953 Brassica carinata HOM05D007011 ORTHO05D008837 2.8e-57 226.5 144 73.6
C05p14820 Brassica napus HOM05D007011 ORTHO05D008837 3.6e-57 226.1 271 45.4
BcaC07g37533 Brassica carinata HOM05D007011 ORTHO05D008837 4.0e-56 222.6 302 41.4
BcaC05g28767 Brassica carinata HOM05D007011 ORTHO05D008837 1.5e-55 220.7 278 43.9
BcaC02g07935 Brassica carinata HOM05D007011 ORTHO05D008837 2.6e-55 219.9 302 42.1
BolC8t48311H Brassica oleracea HOM05D007011 ORTHO05D008837 7.6e-55 218.4 249 44.2
BcaC06g34312 Brassica carinata HOM05D007011 ORTHO05D008837 2.2e-54 216.9 267 43.1
BolC3t21008H Brassica oleracea HOM05D007011 ORTHO05D008837 1.9e-53 213.8 304 41.4
BolC5t31113H Brassica oleracea HOM05D007011 ORTHO05D008837 1.9e-53 213.8 302 42.1
C06p40070 Brassica napus HOM05D007011 ORTHO05D008837 3.2e-53 213.0 271 43.9
BcaC03g15015 Brassica carinata HOM05D007011 ORTHO05D008837 2.5e-50 203.4 304 41.4
BcaC05g25371 Brassica carinata HOM05D007011 ORTHO05D008837 1.2e-49 201.1 192 51.0
BolC5t33294H Brassica oleracea HOM05D007011 ORTHO05D008837 1.2e-49 201.1 238 44.5
BcaC01g00089 Brassica carinata HOM05D007011 ORTHO05D008837 1.6e-49 200.7 192 50.5
C07p30430 Brassica napus HOM05D007011 ORTHO05D008837 1.6e-49 200.7 236 43.2
BcaC08g45131 Brassica carinata HOM05D007011 ORTHO05D008837 2.1e-49 200.3 271 42.1
BcaC04g18660 Brassica carinata HOM05D007011 ORTHO05D008837 8.1e-49 198.4 192 51.0
BcaNung02468 Brassica carinata HOM05D007011 ORTHO05D008837 1.1e-48 198.0 192 51.0
BcaC03g17624 Brassica carinata HOM05D007011 ORTHO05D008837 2.4e-48 196.8 267 42.7
BcaC05g25628 Brassica carinata HOM05D007011 ORTHO05D008837 2.4e-48 196.8 305 40.3
BcaC01g01763 Brassica carinata HOM05D007011 ORTHO05D008837 1.7e-46 190.7 191 49.2
BcaB01g01369 Brassica carinata HOM05D007011 ORTHO05D008837 8.4e-46 188.3 124 75.8
BolC8t48619H Brassica oleracea HOM05D007011 ORTHO05D008837 2.1e-44 183.7 213 43.2
BcaC06g36019 Brassica carinata HOM05D007011 ORTHO05D008837 1.3e-43 181.0 192 53.6
BolC7t43583H Brassica oleracea HOM05D007011 ORTHO05D008837 1.1e-42 177.9 214 43.9
BcaB07g33902 Brassica carinata HOM05D000977 ORTHO05D008837 6.2e-41 172.2 141 63.1
C05p32490 Brassica napus HOM05D007011 ORTHO05D008837 7.6e-39 165.2 197 45.2
BolC5t31983H Brassica oleracea HOM05D007011 ORTHO05D008837 1.3e-38 164.5 196 44.4
C08p05270 Brassica napus HOM05D007011 ORTHO05D008837 2.2e-38 163.7 196 41.3
C06p20850 Brassica napus HOM05D007011 ORTHO05D008837 2.9e-38 163.3 189 42.9
BolC6t37272H Brassica oleracea HOM05D007011 ORTHO05D008837 2.9e-38 163.3 189 42.9
BraA02t08974Z Brassica rapa HOM05D007011 ORTHO05D008837 6.4e-38 162.2 193 45.1
BraA08t33780Z Brassica rapa HOM05D007011 ORTHO05D008837 4.6e-36 156.0 199 42.7
BcaB01g01479 Brassica carinata HOM05D007011 ORTHO05D008837 1.5e-34 151.0 269 34.9
C01p38480 Brassica napus HOM05D007011 ORTHO05D008837 1.5e-34 151.0 176 46.0
C07p51970 Brassica napus HOM05D007011 ORTHO05D008837 8.1e-33 145.2 151 48.3
BolC5t31106H Brassica oleracea HOM05D007011 ORTHO05D008837 4.5e-31 139.4 132 51.5
C03p75650 Brassica napus HOM05D007011 ORTHO05D008837 9.9e-31 138.3 125 52.8
C01p45340 Brassica napus HOM05D007011 ORTHO05D008837 1.3e-30 137.9 95 80.0
BcaC08g44613 Brassica carinata HOM05D007011 ORTHO05D008837 3.0e-27 126.7 244 32.4
BcaC06g36176 Brassica carinata HOM05D007011 ORTHO05D008837 8.7e-27 125.2 67 94.0
BraSC37t46121Z Brassica rapa HOM05D007011 ORTHO05D008837 4.3e-26 122.9 65 93.8
BcaB01g01156 Brassica carinata HOM05D007011 ORTHO05D008837 5.6e-26 122.5 269 30.1
BolC5t32331H Brassica oleracea HOM05D007011 ORTHO05D008837 4.0e-24 116.3 92 66.3
BcaB01g01041 Brassica carinata HOM05D007011 ORTHO05D008837 1.7e-22 110.9 63 85.7
BcaB07g32769 Brassica carinata HOM05D007011 ORTHO05D008837 1.7e-22 110.9 64 79.7
BcaC05g27327 Brassica carinata HOM05D000305 ORTHO05D000065 4.9e-22 109.4 197 34.5
C03p69260 Brassica napus HOM05D007011 ORTHO05D008837 1.1e-21 108.2 74 68.9
Carub.0008s2399 Capsella rubella HOM05D007011 ORTHO05D008837 1.4e-21 107.8 273 27.5
Carub.0033s0001 Capsella rubella HOM05D007011 ORTHO05D008837 2.5e-21 107.1 206 31.1
BolC3t19822H Brassica oleracea HOM05D007011 ORTHO05D008837 2.1e-20 104.0 97 48.5
BcaB03g15265 Brassica carinata HOM05D007011 ORTHO05D008837 3.5e-20 103.2 71 71.8
BcaC07g39807 Brassica carinata HOM05D007011 ORTHO05D008837 1.3e-19 101.3 137 41.6
BcaC01g06815 Brassica carinata HOM05D007011 ORTHO05D008837 2.3e-19 100.5 108 47.2
BcaB01g01570 Brassica carinata HOM05D007011 ORTHO05D008837 5.7e-18 95.9 62 72.6
C06p11410 Brassica napus HOM05D007011 ORTHO05D008837 5.7e-18 95.9 65 69.2
BcaB06g27941 Brassica carinata HOM05D007011 ORTHO05D008837 1.6e-17 94.4 63 73.0
BcaC02g09397 Brassica carinata HOM05D007011 ORTHO05D008837 8.2e-17 92.0 86 51.2
BolC3t19184H Brassica oleracea HOM05D007011 ORTHO05D008837 1.5e-15 87.8 61 68.9
A01p25420 Brassica napus HOM05D001224 ORTHO05D014478 5.9e-15 85.9 42 97.6
Carub.0211s0001 Capsella rubella HOM05D018391 ORTHO05D020270 4.2e-13 79.7 227 28.6
BolC2t10145H Brassica oleracea HOM05D007011 ORTHO05D042806 3.5e-12 76.6 179 31.8
BcaB07g32280 Brassica carinata HOM05D007011 ORTHO05D008837 5.1e-11 72.8 95 42.1
BolC6t35921H Brassica oleracea HOM05D000096 ORTHO05D008837 5.1e-11 72.8 165 27.9
CARHR114920 Cardamine hirsuta HOM05D008686 ORTHO05D010632 5.1e-11 72.8 194 26.8
Sp3g24020 Schrenkiella parvula HOM05D035215 ORTHO05D008837 1.1e-10 71.6 111 36.0
A02p25900 Brassica napus HOM05D007011 ORTHO05D042806 9.7e-10 68.6 68 51.5
BcaB06g26315 Brassica carinata HOM05D007011 ORTHO05D008837 1.3e-09 68.2 69 58.0
BcaC02g07943 Brassica carinata HOM05D007011 ORTHO05D008837 3.7e-09 66.6 78 44.9
BcaB01g01608 Brassica carinata HOM05D007011 ORTHO05D008837 8.2e-09 65.5 62 48.4
BcaB04g17043 Brassica carinata HOM05D007011 ORTHO05D039564 9.0e-08 62.0 102 40.2
C06p14510 Brassica napus HOM05D007011 ORTHO05D008837 1.2e-07 61.6 83 34.9
Sp7g03840 Schrenkiella parvula HOM05D016270 ORTHO05D019360 1.2e-07 61.6 161 23.6
BolC3t16993H Brassica oleracea HOM05D007011 ORTHO05D008837 2.6e-07 60.5 122 31.1


User provided reference genes

Program Settings