Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g28435 Brassica carinata HOM05D001224 ORTHO05D003542 2.3e-40 168.3 79 100.0
A01p20520 Brassica napus HOM05D001224 ORTHO05D003542 5.1e-35 150.6 76 93.4
BraA07t28348Z Brassica rapa HOM05D001224 ORTHO05D003542 1.1e-34 149.4 76 92.1
A03p65930 Brassica napus HOM05D001224 ORTHO05D003542 1.9e-34 148.7 76 92.1
C02p53510 Brassica napus HOM05D001224 ORTHO05D003542 1.9e-34 148.7 76 92.1
C03p65990 Brassica napus HOM05D001224 ORTHO05D003542 1.9e-34 148.7 76 92.1
C09p16570 Brassica napus HOM05D001224 ORTHO05D003542 1.9e-34 148.7 76 92.1
BolC3t18910H Brassica oleracea HOM05D001224 ORTHO05D003542 1.9e-34 148.7 76 92.1
BolC4t25126H Brassica oleracea HOM05D001224 ORTHO05D003542 1.9e-34 148.7 76 92.1
BolC6t36735H Brassica oleracea HOM05D001224 ORTHO05D003542 1.9e-34 148.7 76 92.1
BolC9t57316H Brassica oleracea HOM05D001224 ORTHO05D003542 1.9e-34 148.7 76 92.1
C04p41850 Brassica napus HOM05D001224 ORTHO05D003542 2.5e-34 148.3 76 92.1
A03p54410 Brassica napus HOM05D001224 ORTHO05D003542 4.3e-34 147.5 76 90.8
C01p38690 Brassica napus HOM05D001224 ORTHO05D003542 4.3e-34 147.5 76 92.1
BraA03t14506Z Brassica rapa HOM05D001224 ORTHO05D003542 4.3e-34 147.5 76 90.8
C05p34940 Brassica napus HOM05D001224 ORTHO05D003542 5.6e-34 147.1 75 92.0
BolC3t18710H Brassica oleracea HOM05D001224 ORTHO05D003542 5.6e-34 147.1 76 90.8
BraA10t42919Z Brassica rapa HOM05D001224 ORTHO05D003542 7.3e-34 146.7 76 89.5
C01p44930 Brassica napus HOM05D001224 ORTHO05D003542 9.5e-34 146.4 76 90.8
C07p30720 Brassica napus HOM05D001224 ORTHO05D003542 9.5e-34 146.4 76 89.5
A07p02040 Brassica napus HOM05D001224 ORTHO05D003542 1.2e-33 146.0 76 89.5
A09p33390 Brassica napus HOM05D001224 ORTHO05D003542 1.2e-33 146.0 76 90.8
C01p30570 Brassica napus HOM05D001224 ORTHO05D003542 1.2e-33 146.0 76 90.8
BraA09t38882Z Brassica rapa HOM05D001224 ORTHO05D003542 1.2e-33 146.0 76 90.8
C07p49100 Brassica napus HOM05D001224 ORTHO05D003542 1.6e-33 145.6 76 90.8
C08p06680 Brassica napus HOM05D001224 ORTHO05D003542 1.6e-33 145.6 76 90.8
C08p08880 Brassica napus HOM05D001224 ORTHO05D003542 1.6e-33 145.6 76 90.8
C09p19450 Brassica napus HOM05D001224 ORTHO05D003542 1.6e-33 145.6 75 90.7
BolC7t45417H Brassica oleracea HOM05D001224 ORTHO05D003542 1.6e-33 145.6 76 90.8
C04p56100 Brassica napus HOM05D001224 ORTHO05D003542 2.1e-33 145.2 76 89.5
BolC6t36240H Brassica oleracea HOM05D001224 ORTHO05D003542 2.8e-33 144.8 76 89.5
C05p44750 Brassica napus HOM05D001224 ORTHO05D003542 3.6e-33 144.4 76 90.8
BraA01t03049Z Brassica rapa HOM05D001224 ORTHO05D003542 4.7e-33 144.1 76 89.5
C01p30530 Brassica napus HOM05D001224 ORTHO05D003542 8.1e-33 143.3 76 88.2
C03p75870 Brassica napus HOM05D001224 ORTHO05D003542 1.4e-32 142.5 76 89.5
C09p21160 Brassica napus HOM05D001224 ORTHO05D003542 1.8e-32 142.1 76 86.8
BolC3t19483H Brassica oleracea HOM05D001224 ORTHO05D003542 1.8e-32 142.1 76 88.2
BolC9t55018H Brassica oleracea HOM05D001224 ORTHO05D003542 1.8e-32 142.1 76 86.8
A08p09950 Brassica napus HOM05D001224 ORTHO05D003542 2.4e-32 141.7 76 89.5
C07p38500 Brassica napus HOM05D001224 ORTHO05D003542 2.4e-32 141.7 76 89.5
BolC7t43617H Brassica oleracea HOM05D001224 ORTHO05D003542 2.4e-32 141.7 76 88.2
BraA08t32989Z Brassica rapa HOM05D001224 ORTHO05D003542 2.4e-32 141.7 76 89.5
BraA01t01980Z Brassica rapa HOM05D001224 ORTHO05D003542 3.1e-32 141.4 75 89.3
BcaB04g17427 Brassica carinata HOM05D001224 ORTHO05D003542 2.4e-24 115.2 74 70.3
BcaB01g01308 Brassica carinata HOM05D001224 ORTHO05D003542 3.1e-24 114.8 57 91.2
BcaB03g16496 Brassica carinata HOM05D001224 ORTHO05D003542 3.1e-24 114.8 57 91.2
BcaC02g09777 Brassica carinata HOM05D001224 ORTHO05D003542 3.1e-24 114.8 57 91.2
BcaC08g44057 Brassica carinata HOM05D001224 ORTHO05D003542 3.1e-24 114.8 57 91.2
BcaC09g48966 Brassica carinata HOM05D001224 ORTHO05D003542 3.1e-24 114.8 57 91.2
BolC3t18859H Brassica oleracea HOM05D001224 ORTHO05D003542 3.1e-24 114.8 57 91.2
BcaC07g39107 Brassica carinata HOM05D001224 ORTHO05D003542 6.9e-24 113.6 57 89.5
C03p56220 Brassica napus HOM05D001224 ORTHO05D003542 6.9e-24 113.6 58 87.9
C01p48980 Brassica napus HOM05D002776 ORTHO05D003542 2.6e-23 111.7 58 86.2
BcaC05g25873 Brassica carinata HOM05D001224 ORTHO05D003542 4.4e-23 110.9 57 89.5
BcaC08g43734 Brassica carinata HOM05D001224 ORTHO05D003542 9.9e-23 109.8 57 91.2
BolC8t49069H Brassica oleracea HOM05D001224 ORTHO05D003542 1.1e-21 106.3 54 94.4
BolC5t31267H Brassica oleracea HOM05D001224 ORTHO05D003542 2.4e-21 105.1 76 59.2
BcaC02g08298 Brassica carinata HOM05D001224 ORTHO05D003542 3.2e-21 104.8 55 85.5
BcaB07g33940 Brassica carinata HOM05D001224 ORTHO05D003542 7.1e-21 103.6 71 67.6
C05p25300 Brassica napus HOM05D001224 ORTHO05D003542 7.1e-21 103.6 76 59.2
BolC6t37489H Brassica oleracea HOM05D001224 ORTHO05D003542 9.3e-21 103.2 54 90.7
BcaB06g26726 Brassica carinata HOM05D001224 ORTHO05D003542 3.5e-20 101.3 76 61.8
BcaB07g33216 Brassica carinata HOM05D001224 ORTHO05D003542 3.5e-20 101.3 76 60.5
BcaB04g18313 Brassica carinata HOM05D001224 ORTHO05D003542 7.8e-20 100.1 49 91.8
C04p09860 Brassica napus HOM05D001224 ORTHO05D003542 6.6e-19 97.1 76 56.6
BolC4t22594H Brassica oleracea HOM05D001224 ORTHO05D003542 6.6e-19 97.1 76 56.6
BcaB06g27272 Brassica carinata HOM05D001224 ORTHO05D003542 1.5e-18 95.9 74 60.8
C09p42280 Brassica napus HOM05D001224 ORTHO05D003542 4.3e-18 94.4 75 58.7
BolC9t57106H Brassica oleracea HOM05D001224 ORTHO05D003542 4.3e-18 94.4 75 58.7
BcaB04g17784 Brassica carinata HOM05D001224 ORTHO05D003542 5.6e-18 94.0 76 52.6
A08p09550 Brassica napus HOM05D001224 ORTHO05D003542 7.3e-18 93.6 72 62.5
BraA01t02476Z Brassica rapa HOM05D001224 ORTHO05D003542 7.3e-18 93.6 72 62.5
BraA08t32952Z Brassica rapa HOM05D001224 ORTHO05D003542 7.3e-18 93.6 72 62.5
BcaB07g32746 Brassica carinata HOM05D001224 ORTHO05D003542 9.6e-18 93.2 76 50.0
BcaC05g27785 Brassica carinata HOM05D001224 ORTHO05D003542 9.6e-18 93.2 72 62.5
A01p25430 Brassica napus HOM05D001224 ORTHO05D003542 9.6e-18 93.2 72 62.5
A05p28400 Brassica napus HOM05D001224 ORTHO05D003542 9.6e-18 93.2 72 62.5
C04p47860 Brassica napus HOM05D001224 ORTHO05D003542 9.6e-18 93.2 72 62.5
C05p37790 Brassica napus HOM05D001224 ORTHO05D003542 9.6e-18 93.2 72 62.5
C07p00680 Brassica napus HOM05D001224 ORTHO05D003542 9.6e-18 93.2 72 62.5
BolC4t26386H Brassica oleracea HOM05D001224 ORTHO05D003542 9.6e-18 93.2 72 62.5
BolC5t33263H Brassica oleracea HOM05D001224 ORTHO05D003542 9.6e-18 93.2 72 62.5
A10p06600 Brassica napus HOM05D001224 ORTHO05D003542 1.3e-17 92.8 72 62.5
BraA10t42920Z Brassica rapa HOM05D001224 ORTHO05D003542 1.3e-17 92.8 72 62.5
BcaC02g12295 Brassica carinata HOM05D001224 ORTHO05D003542 1.6e-17 92.4 72 61.1
C04p05510 Brassica napus HOM05D001224 ORTHO05D003542 1.6e-17 92.4 72 61.1
C05p45400 Brassica napus HOM05D001224 ORTHO05D003542 1.6e-17 92.4 72 61.1
BcaC09g48602 Brassica carinata HOM05D001224 ORTHO05D001170 2.1e-17 92.0 72 61.1
BolC1t04761H Brassica oleracea HOM05D001224 ORTHO05D003542 2.1e-17 92.0 72 61.1
A03p65910 Brassica napus HOM05D001224 ORTHO05D003542 2.8e-17 91.7 72 61.1
C05p42040 Brassica napus HOM05D001224 ORTHO05D003542 2.8e-17 91.7 77 59.7
BraA03t15645Z Brassica rapa HOM05D001224 ORTHO05D003542 2.8e-17 91.7 72 61.1
BolC8t49591H Brassica oleracea HOM05D001224 ORTHO05D003542 3.6e-17 91.3 72 61.1
BcaC06g36118 Brassica carinata HOM05D001224 ORTHO05D003542 4.8e-17 90.9 78 56.4
C04p55400 Brassica napus HOM05D001224 ORTHO05D003542 4.8e-17 90.9 72 61.1
BolC7t41181H Brassica oleracea HOM05D001224 ORTHO05D003542 4.8e-17 90.9 78 56.4
BolC9t59177H Brassica oleracea HOM05D001224 ORTHO05D003542 4.8e-17 90.9 72 59.7
A10p08840 Brassica napus HOM05D001224 ORTHO05D003542 8.1e-17 90.1 72 61.1
C05p36110 Brassica napus HOM05D001224 ORTHO05D003542 8.1e-17 90.1 72 61.1
C07p06930 Brassica napus HOM05D001224 ORTHO05D003542 8.1e-17 90.1 72 61.1
BolC7t41112H Brassica oleracea HOM05D001224 ORTHO05D003542 8.1e-17 90.1 72 61.1
BcaC05g28168 Brassica carinata HOM05D001224 ORTHO05D003542 1.4e-16 89.4 71 63.4
A01p28550 Brassica napus HOM05D001224 ORTHO05D003542 1.4e-16 89.4 72 61.1
C01p38780 Brassica napus HOM05D001224 ORTHO05D003542 1.4e-16 89.4 75 57.3
C07p01240 Brassica napus HOM05D001224 ORTHO05D003542 1.4e-16 89.4 42 92.9
BolC1t03835H Brassica oleracea HOM05D001224 ORTHO05D003542 1.4e-16 89.4 75 57.3
BraA01t03047Z Brassica rapa HOM05D001224 ORTHO05D003542 1.4e-16 89.4 72 61.1
BcaC05g28453 Brassica carinata HOM05D001224 ORTHO05D003542 1.8e-16 89.0 72 61.1
A08p08840 Brassica napus HOM05D001224 ORTHO05D003542 1.8e-16 89.0 72 61.1
C07p05290 Brassica napus HOM05D001224 ORTHO05D003542 1.8e-16 89.0 75 56.0
C07p12000 Brassica napus HOM05D001224 ORTHO05D003542 1.8e-16 89.0 72 59.7
BraA09t40148Z Brassica rapa HOM05D001224 ORTHO05D003542 1.8e-16 89.0 72 58.3
BraSC37t46117Z Brassica rapa HOM05D001224 ORTHO05D003542 2.4e-16 88.6 72 59.7
BraA07t28368Z Brassica rapa HOM05D001224 ORTHO05D003542 3.1e-16 88.2 72 61.1
C03p58290 Brassica napus HOM05D001224 ORTHO05D003542 4.0e-16 87.8 72 59.7
BolC7t40929H Brassica oleracea HOM05D001224 ORTHO05D003542 5.3e-16 87.4 75 56.0
C07p01200 Brassica napus HOM05D001224 ORTHO05D003542 6.9e-16 87.0 72 59.7
C02p39450 Brassica napus HOM05D001224 ORTHO05D003542 9.0e-16 86.7 75 54.7
C06p04840 Brassica napus HOM05D001224 ORTHO05D003542 9.0e-16 86.7 72 58.3
BcaC02g09113 Brassica carinata HOM05D001224 ORTHO05D003542 1.5e-15 85.9 42 90.5
BcaB06g26818 Brassica carinata HOM05D001224 ORTHO05D003542 2.0e-15 85.5 49 81.6
BcaC06g36232 Brassica carinata HOM05D001224 ORTHO05D003542 2.6e-15 85.1 76 51.3
A03p54390 Brassica napus HOM05D001224 ORTHO05D003542 2.6e-15 85.1 72 56.9
C07p06200 Brassica napus HOM05D001224 ORTHO05D003542 2.6e-15 85.1 76 51.3
BolC2t09958H Brassica oleracea HOM05D001224 ORTHO05D003542 2.6e-15 85.1 75 53.3
BolC1t03177H Brassica oleracea HOM05D001224 ORTHO05D003542 3.4e-15 84.7 72 58.3
BolC7t41037H Brassica oleracea HOM05D001224 ORTHO05D003542 3.4e-15 84.7 76 52.6
BraA03t15646Z Brassica rapa HOM05D001224 ORTHO05D003542 3.4e-15 84.7 44 93.2
BolC3t20360H Brassica oleracea HOM05D001224 ORTHO05D003542 1.3e-14 82.8 72 56.9
C07p07600 Brassica napus HOM05D001224 ORTHO05D003542 2.9e-14 81.6 78 52.6
BcaC06g36018 Brassica carinata HOM05D001224 ORTHO05D003542 4.9e-14 80.9 73 54.8
BcaC01g03079 Brassica carinata HOM05D001224 ORTHO05D003542 1.1e-13 79.7 36 94.4
C07p13950 Brassica napus HOM05D001224 ORTHO05D003542 1.1e-13 79.7 60 60.0
BcaC01g01871 Brassica carinata HOM05D001224 ORTHO05D003542 2.4e-13 78.6 76 50.0
BraA02t07130Z Brassica rapa HOM05D001224 ORTHO05D003542 2.4e-13 78.6 76 47.4
C03p66100 Brassica napus HOM05D008414 ORTHO05D003542 4.2e-13 77.8 63 60.3
BcaC05g26485 Brassica carinata HOM05D001224 ORTHO05D003542 5.4e-13 77.4 76 47.4
BolC4t22584H Brassica oleracea HOM05D001224 ORTHO05D003542 1.2e-12 76.3 76 48.7
BcaC02g11931 Brassica carinata HOM05D001224 ORTHO05D003542 2.1e-12 75.5 76 48.7
BcaNung05284 Brassica carinata HOM05D001224 ORTHO05D003542 3.5e-12 74.7 63 52.4
BcaC08g44372 Brassica carinata HOM05D001224 ORTHO05D003542 4.6e-12 74.3 34 94.1
A01p26690 Brassica napus HOM05D001224 ORTHO05D003542 6.0e-12 73.9 74 52.7
BolC4t23825H Brassica oleracea HOM05D001224 ORTHO05D003542 6.0e-12 73.9 63 50.8
BcaC06g35970 Brassica carinata HOM05D001224 ORTHO05D003542 2.3e-11 72.0 65 55.4
BcaC06g36233 Brassica carinata HOM05D001224 ORTHO05D003542 1.9e-10 68.9 63 49.2
C03p71050 Brassica napus HOM05D001224 ORTHO05D003542 4.3e-10 67.8 63 46.0
BolC3t19388H Brassica oleracea HOM05D001224 ORTHO05D003542 4.3e-10 67.8 63 46.0
BraA03t14504Z Brassica rapa HOM05D001224 ORTHO05D003542 2.1e-09 65.5 72 48.6
BcaC06g35692 Brassica carinata HOM05D001224 ORTHO05D003542 8.1e-09 63.5 72 47.2
A04p11170 Brassica napus HOM05D001224 ORTHO05D023838 2.4e-08 62.0 51 51.0
BraA04t16781Z Brassica rapa HOM05D001224 ORTHO05D023838 4.0e-08 61.2 51 52.9
BcaB07g33138 Brassica carinata HOM05D001224 ORTHO05D003542 1.2e-07 59.7 42 57.1


User provided reference genes

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