Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g28430 Brassica carinata HOM05D000353 ORTHO05D000174 2.2e-34 148.3 68 100.0
C05p45110 Brassica napus HOM05D000353 ORTHO05D000174 2.2e-34 148.3 68 100.0
BcaC02g08804 Brassica carinata HOM05D000353 ORTHO05D000174 3.2e-22 107.8 62 72.6
A03p66220 Brassica napus HOM05D000353 ORTHO05D000174 3.2e-22 107.8 62 72.6
BraA03t15675Z Brassica rapa HOM05D000353 ORTHO05D000174 3.2e-22 107.8 62 72.6
BolC2t10352H Brassica oleracea HOM05D000353 ORTHO05D000174 7.2e-22 106.7 62 74.2
BcaC01g00750 Brassica carinata HOM05D000353 ORTHO05D000174 1.6e-21 105.5 62 72.6
A03p66100 Brassica napus HOM05D000353 ORTHO05D000174 2.7e-21 104.8 62 72.6
A05p24550 Brassica napus HOM05D000353 ORTHO05D000174 2.7e-21 104.8 62 72.6
BraA09t40707Z Brassica rapa HOM05D000353 ORTHO05D000174 2.7e-21 104.8 62 72.6
BcaB06g28316 Brassica carinata HOM05D000353 ORTHO05D000174 4.7e-21 104.0 62 71.0
BcaB02g11010 Brassica carinata HOM05D000353 ORTHO05D000174 1.8e-20 102.1 62 71.0
C03p18660 Brassica napus HOM05D000353 ORTHO05D000174 4.0e-20 100.9 61 68.9
BolC3t14258H Brassica oleracea HOM05D000353 ORTHO05D000174 4.0e-20 100.9 61 68.9
C02p26060 Brassica napus HOM05D000353 ORTHO05D000174 5.2e-20 100.5 62 75.8
C09p27100 Brassica napus HOM05D000353 ORTHO05D000174 5.2e-20 100.5 61 68.9
A05p27520 Brassica napus HOM05D000353 ORTHO05D000174 6.8e-20 100.1 62 75.8
A02p32050 Brassica napus HOM05D000353 ORTHO05D000174 8.8e-20 99.8 61 67.2
BraA02t08216Z Brassica rapa HOM05D000353 ORTHO05D000174 8.8e-20 99.8 61 67.2
BcaC02g10672 Brassica carinata HOM05D000353 ORTHO05D000174 2.0e-19 98.6 62 67.7
BcaC06g36089 Brassica carinata HOM05D000353 ORTHO05D000174 2.0e-19 98.6 62 64.5
C04p26530 Brassica napus HOM05D000353 ORTHO05D000174 2.0e-19 98.6 62 67.7
BolC4t24150H Brassica oleracea HOM05D000353 ORTHO05D000174 2.0e-19 98.6 62 67.7
BcaB05g23506 Brassica carinata HOM05D000353 ORTHO05D000174 4.4e-19 97.4 62 61.3
BcaC02g09046 Brassica carinata HOM05D000353 ORTHO05D000174 7.5e-19 96.7 62 74.2
BolC4t25352H Brassica oleracea HOM05D000353 ORTHO05D000174 7.5e-19 96.7 62 74.2
C07p07970 Brassica napus HOM05D000353 ORTHO05D000174 9.7e-19 96.3 65 61.5
BolC7t41214H Brassica oleracea HOM05D000353 ORTHO05D000174 9.7e-19 96.3 65 61.5
BolC5t33239H Brassica oleracea HOM05D000353 ORTHO05D000174 1.3e-18 95.9 45 97.8
BcaB08g34954 Brassica carinata HOM05D000353 ORTHO05D000174 2.2e-18 95.1 62 61.3
A09p28970 Brassica napus HOM05D000353 ORTHO05D000174 4.8e-18 94.0 62 62.9
BolC7t42278H Brassica oleracea HOM05D000353 ORTHO05D000174 4.8e-18 94.0 62 62.9
BraA09t38461Z Brassica rapa HOM05D000353 ORTHO05D000174 4.8e-18 94.0 62 62.9
BcaC02g07613 Brassica carinata HOM05D000353 ORTHO05D000174 1.4e-17 92.4 63 68.3
BcaC06g35296 Brassica carinata HOM05D000353 ORTHO05D000174 1.4e-17 92.4 62 61.3
C05p49950 Brassica napus HOM05D000353 ORTHO05D000174 1.4e-17 92.4 63 68.3
BolC5t34161H Brassica oleracea HOM05D000353 ORTHO05D000174 1.4e-17 92.4 63 68.3
BcaB05g22552 Brassica carinata HOM05D000353 ORTHO05D000174 1.8e-17 92.0 62 61.3
C07p17710 Brassica napus HOM05D000353 ORTHO05D000174 4.1e-17 90.9 62 61.3
BolC3t20719H Brassica oleracea HOM05D000353 ORTHO05D000174 5.3e-17 90.5 62 67.7
C09p45320 Brassica napus HOM05D000353 ORTHO05D000174 9.1e-17 89.7 57 66.7
BcaB06g27108 Brassica carinata HOM05D000353 ORTHO05D000174 1.6e-16 89.0 62 56.5
BcaC07g37519 Brassica carinata HOM05D000353 ORTHO05D000174 3.5e-16 87.8 62 58.1
C01p17330 Brassica napus HOM05D000353 ORTHO05D000174 1.0e-15 86.3 62 56.5
BraA03t14652Z Brassica rapa HOM05D000353 ORTHO05D000174 1.0e-15 86.3 62 56.5
BraA03t14653Z Brassica rapa HOM05D000353 ORTHO05D000174 1.3e-15 85.9 60 58.3
BcaC03g16609 Brassica carinata HOM05D000353 ORTHO05D000174 2.9e-15 84.7 60 58.3
A10p31040 Brassica napus HOM05D000353 ORTHO05D000174 2.9e-15 84.7 61 63.9
BolC7t45258H Brassica oleracea HOM05D000353 ORTHO05D000174 2.9e-15 84.7 61 63.9
BolC9t57402H Brassica oleracea HOM05D000353 ORTHO05D000174 2.9e-15 84.7 56 64.3
A07p36560 Brassica napus HOM05D000353 ORTHO05D000174 6.5e-15 83.6 62 56.5
C06p15640 Brassica napus HOM05D000353 ORTHO05D000174 8.5e-15 83.2 62 56.5
BolC2t08345H Brassica oleracea HOM05D000353 ORTHO05D000174 1.1e-14 82.8 61 62.3
A07p20350 Brassica napus HOM05D000353 ORTHO05D000174 1.5e-14 82.4 62 54.8
BcaC09g51435 Brassica carinata HOM05D000353 ORTHO05D000174 1.9e-14 82.0 62 54.8
BolC1t01288H Brassica oleracea HOM05D000353 ORTHO05D000174 1.9e-14 82.0 62 54.8
Thhalv10009292m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.9e-14 82.0 62 51.6
C06p22090 Brassica napus HOM05D000353 ORTHO05D000174 4.2e-14 80.9 62 59.7
BolC6t37396H Brassica oleracea HOM05D000353 ORTHO05D000174 4.2e-14 80.9 62 59.7
C05p32800 Brassica napus HOM05D000353 ORTHO05D000174 6.1e-13 77.0 62 56.5
BolC4t26647H Brassica oleracea HOM05D000353 ORTHO05D000174 8.0e-13 76.6 40 80.0
BcaB08g34620 Brassica carinata HOM05D000353 ORTHO05D000174 4.0e-12 74.3 62 51.6
BcaB06g27107 Brassica carinata HOM05D000353 ORTHO05D000174 4.4e-11 70.9 62 50.0
Carub.0007s3602 Capsella rubella HOM05D000353 ORTHO05D000174 2.4e-09 65.1 62 46.8
BcaB08g34953 Brassica carinata HOM05D000353 ORTHO05D000174 3.1e-09 64.7 62 46.8
C06p28530 Brassica napus HOM05D000353 ORTHO05D000174 4.5e-08 60.8 60 46.7
BolC6t38021H Brassica oleracea HOM05D000353 ORTHO05D000174 4.5e-08 60.8 60 46.7
BraA05t22072Z Brassica rapa HOM05D000353 ORTHO05D000174 1.0e-07 59.7 60 45.0
C08p24400 Brassica napus HOM05D000353 ORTHO05D000174 3.8e-07 57.8 60 41.7
C03p65000 Brassica napus HOM05D000353 ORTHO05D000174 5.0e-07 57.4 62 38.7
BolC3t18759H Brassica oleracea HOM05D000353 ORTHO05D000174 5.0e-07 57.4 62 38.7
C05p49080 Brassica napus HOM05D000353 ORTHO05D000174 6.6e-07 57.0 60 43.3
A02p01740 Brassica napus HOM05D000096 ORTHO05D000045 8.6e-07 56.6 62 37.1
A06p16970 Brassica napus HOM05D000353 ORTHO05D000174 8.6e-07 56.6 62 37.1
BraA06t24806Z Brassica rapa HOM05D000353 ORTHO05D000174 8.6e-07 56.6 62 37.1
BraA10t42806Z Brassica rapa HOM05D000353 ORTHO05D000174 8.6e-07 56.6 62 37.1
BolC5t33651H Brassica oleracea HOM05D000353 ORTHO05D000174 1.1e-06 56.2 60 43.3
Thhalv10000133m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.1e-06 56.2 66 36.4
Thhalv10027364m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.1e-06 56.2 66 36.4
C01p36340 Brassica napus HOM05D000353 ORTHO05D000174 1.5e-06 55.8 60 43.3
C05p57210 Brassica napus HOM05D000353 ORTHO05D000174 1.5e-06 55.8 62 37.1
C06p01070 Brassica napus HOM05D000353 ORTHO05D000174 1.5e-06 55.8 62 37.1
BolC1t03592H Brassica oleracea HOM05D000353 ORTHO05D000174 1.5e-06 55.8 60 43.3
BolC8t47058H Brassica oleracea HOM05D000353 ORTHO05D000174 1.5e-06 55.8 29 79.3
Thhalv10028256m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.5e-06 55.8 64 37.5
C04p31400 Brassica napus HOM05D000353 ORTHO05D000174 1.9e-06 55.5 61 36.1
BcaB08g36042 Brassica carinata HOM05D000353 ORTHO05D000174 9.5e-06 53.1 62 38.7
A07p36550 Brassica napus HOM05D000353 ORTHO05D000174 9.5e-06 53.1 65 38.5
BolC5t32374H Brassica oleracea HOM05D000353 ORTHO05D000174 9.5e-06 53.1 62 38.7


User provided reference genes

Program Settings