Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g28426 Brassica carinata HOM05D040846 ORTHO05D032422 1.5e-133 479.6 249 100.0
C05p45070 Brassica napus HOM05D003251 ORTHO05D021988 2.1e-55 219.9 161 77.6
C04p16830 Brassica napus HOM05D040846 ORTHO05D032422 7.6e-37 158.3 167 61.1
BolC4t23239H Brassica oleracea HOM05D040846 ORTHO05D032422 2.9e-36 156.4 167 60.5
BcaC02g11595 Brassica carinata HOM05D003251 ORTHO05D019972 1.0e-33 147.9 85 89.4
BraA06t23643Z Brassica rapa HOM05D003251 ORTHO05D019972 1.2e-29 134.4 71 93.0
BolC1t05875H Brassica oleracea HOM05D003251 ORTHO05D019972 5.9e-29 132.1 71 91.5
BcaB01g04080 Brassica carinata HOM05D003251 ORTHO05D003770 2.3e-25 120.2 80 78.8
BraA03t10994Z Brassica rapa HOM05D003251 ORTHO05D003770 3.9e-25 119.4 78 78.2
BolC3t14406H Brassica oleracea HOM05D003251 ORTHO05D003770 6.7e-25 118.6 78 80.8
C03p20320 Brassica napus HOM05D003251 ORTHO05D003770 1.1e-24 117.9 78 80.8
A03p17210 Brassica napus HOM05D003251 ORTHO05D003770 2.6e-24 116.7 78 78.2
CARHR238000 Cardamine hirsuta HOM05D002665 ORTHO05D002991 2.2e-23 113.6 149 51.0
A01p08040 Brassica napus HOM05D002665 ORTHO05D002991 2.8e-23 113.2 149 53.0
BraA01t00750Z Brassica rapa HOM05D002665 ORTHO05D002991 2.8e-23 113.2 149 53.0
Sp7g27940 Schrenkiella parvula HOM05D002665 ORTHO05D002991 8.2e-23 111.7 172 47.1
AL7G22110 Arabidopsis lyrata HOM05D002665 ORTHO05D002991 1.4e-22 110.9 150 52.0
BcaC09g51786 Brassica carinata HOM05D002665 ORTHO05D020138 1.4e-22 110.9 149 52.3
C01p09030 Brassica napus HOM05D002665 ORTHO05D002991 1.4e-22 110.9 149 52.3
BolC1t00893H Brassica oleracea HOM05D002665 ORTHO05D002991 1.4e-22 110.9 149 52.3
BolC1t05873H Brassica oleracea HOM05D003251 ORTHO05D019972 2.4e-22 110.2 59 91.5
Thhalv10025377m.g Eutrema salsugineum HOM05D002665 ORTHO05D002991 1.3e-20 104.4 172 45.3
Carub.0007s1051 Capsella rubella HOM05D002665 ORTHO05D002991 1.7e-20 104.0 149 49.0
AT4G30090 Arabidopsis thaliana HOM05D002665 ORTHO05D002991 2.2e-20 103.6 149 49.0
BcaB03g14029 Brassica carinata HOM05D033282 ORTHO05D002991 4.2e-19 99.4 100 59.0
BcaB06g28387 Brassica carinata HOM05D003251 ORTHO05D003770 4.2e-19 99.4 71 73.2
Sp4g13300 Schrenkiella parvula HOM05D003251 ORTHO05D003770 4.2e-19 99.4 83 62.7
Aa31LG2G20480 Aethionema arabicum HOM05D002665 ORTHO05D002991 1.6e-18 97.4 121 55.4
Thhalv10017740m.g Eutrema salsugineum HOM05D003251 ORTHO05D003770 3.0e-17 93.2 71 69.0
THA.LOC104814666 Tarenaya hassleriana HOM05D002665 ORTHO05D002991 5.2e-17 92.4 167 36.5
BcaC01g06015 Brassica carinata HOM05D003251 ORTHO05D003770 5.7e-16 89.0 53 88.7
C04p59920 Brassica napus HOM05D003251 ORTHO05D003770 9.7e-16 88.2 78 62.8
BolC4t27493H Brassica oleracea HOM05D003251 ORTHO05D003770 9.7e-16 88.2 78 62.8
BcaB06g28449 Brassica carinata HOM05D003251 ORTHO05D003770 8.2e-15 85.1 79 64.6
A04p23500 Brassica napus HOM05D003251 ORTHO05D003770 2.4e-14 83.6 90 57.8
BraA04t17877Z Brassica rapa HOM05D003251 ORTHO05D003770 2.4e-14 83.6 90 57.8
A09p27510 Brassica napus HOM05D003251 ORTHO05D019972 2.0e-13 80.5 71 62.0
AL4G25750 Arabidopsis lyrata HOM05D003251 ORTHO05D003770 2.9e-12 76.6 95 49.5
Thhalv10007468m.g Eutrema salsugineum HOM05D003251 ORTHO05D003770 2.1e-10 70.5 89 52.8
Sp1g05380 Schrenkiella parvula HOM05D003251 ORTHO05D003770 2.7e-10 70.1 89 51.7
THA.LOC104826243 Tarenaya hassleriana HOM05D003251 ORTHO05D003770 8.0e-10 68.6 82 50.0
C05p04850 Brassica napus HOM05D003251 ORTHO05D003770 2.3e-09 67.0 89 49.4
BolC5t29257H Brassica oleracea HOM05D003251 ORTHO05D003770 2.3e-09 67.0 89 49.4
BraA08t35498Z Brassica rapa HOM05D003251 ORTHO05D003770 4.0e-09 66.2 89 49.4
A10p05260 Brassica napus HOM05D003251 ORTHO05D003770 8.8e-09 65.1 89 48.3
BraA10t42791Z Brassica rapa HOM05D003251 ORTHO05D003770 8.8e-09 65.1 89 48.3
BolC8t47062H Brassica oleracea HOM05D003251 ORTHO05D003770 1.5e-08 64.3 89 48.3
A08p35910 Brassica napus HOM05D003251 ORTHO05D003770 2.0e-08 63.9 89 48.3
C08p02660 Brassica napus HOM05D003251 ORTHO05D003770 2.0e-08 63.9 89 48.3
CARHR006330 Cardamine hirsuta HOM05D003251 ORTHO05D003770 7.5e-08 62.0 89 47.2
A02p16890 Brassica napus HOM05D003251 ORTHO05D019972 9.7e-08 61.6 71 50.7
Aa31LG1G7700 Aethionema arabicum HOM05D003251 ORTHO05D003770 1.7e-07 60.8 97 44.3
Aa31LG6G9100 Aethionema arabicum HOM05D003251 ORTHO05D003770 2.8e-07 60.1 90 47.8
AL1G16670 Arabidopsis lyrata HOM05D003251 ORTHO05D003770 4.8e-07 59.3 89 47.2
Carub.0001s0599 Capsella rubella HOM05D003251 ORTHO05D003770 8.2e-07 58.5 86 47.7
AL8G24220 Arabidopsis lyrata HOM05D002665 ORTHO05D019713 1.4e-06 57.8 60 56.7
THA.LOC104800816 Tarenaya hassleriana HOM05D003251 ORTHO05D003770 1.4e-06 57.8 93 41.9
BraA10t43996Z Brassica rapa HOM05D003251 ORTHO05D021988 9.1e-06 55.1 26 100.0


User provided reference genes

Program Settings