Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g28412 Brassica carinata HOM05D066120 ORTHO05D000129 5.9e-42 173.7 83 100.0
BcaC05g28413 Brassica carinata HOM05D066120 ORTHO05D000129 5.9e-42 173.7 83 100.0
C05p45000 Brassica napus HOM05D000209 ORTHO05D000129 3.1e-19 98.2 52 92.3
BcaB06g26048 Brassica carinata HOM05D000209 ORTHO05D000129 1.9e-16 89.0 52 82.7
BcaC05g28411 Brassica carinata HOM05D000209 ORTHO05D000129 1.2e-15 86.3 52 78.8
C05p44980 Brassica napus HOM05D000209 ORTHO05D000129 8.0e-15 83.6 52 76.9
BcaC05g28415 Brassica carinata HOM05D000209 ORTHO05D000129 2.3e-14 82.0 52 75.0
BraA05t21828Z Brassica rapa HOM05D000209 ORTHO05D000129 2.3e-14 82.0 52 75.0
A05p29340 Brassica napus HOM05D000209 ORTHO05D000129 8.8e-14 80.1 53 77.4
Carub.0006s2878 Capsella rubella HOM05D000209 ORTHO05D000129 1.3e-12 76.3 68 55.9
Thhalv10022270m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 4.8e-12 74.3 64 57.8
Thhalv10022315m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.4e-11 72.0 57 59.6
AL6G44040 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.1e-11 71.2 66 57.6
C07p14350 Brassica napus HOM05D000209 ORTHO05D000129 4.1e-11 71.2 70 52.9
BolC7t41932H Brassica oleracea HOM05D000209 ORTHO05D000129 4.1e-11 71.2 70 52.9
A07p09290 Brassica napus HOM05D000209 ORTHO05D000129 2.7e-10 68.6 70 51.4
BraA07t28728Z Brassica rapa HOM05D000209 ORTHO05D000129 2.7e-10 68.6 70 51.4
Carub.0009s0008 Capsella rubella HOM05D000209 ORTHO05D000129 3.5e-10 68.2 67 47.8
CARHR096960 Cardamine hirsuta HOM05D000209 ORTHO05D000129 7.7e-10 67.0 65 53.8
BcaC05g28229 Brassica carinata HOM05D000209 ORTHO05D000129 1.0e-09 66.6 69 53.6
C05p42920 Brassica napus HOM05D000209 ORTHO05D000129 1.0e-09 66.6 69 53.6
BolC5t33019H Brassica oleracea HOM05D000209 ORTHO05D000129 1.0e-09 66.6 69 53.6
BcaC05g28226 Brassica carinata HOM05D000209 ORTHO05D000129 1.7e-09 65.9 69 52.2
C05p42940 Brassica napus HOM05D000209 ORTHO05D000129 1.7e-09 65.9 69 52.2
BcaB06g26178 Brassica carinata HOM05D000209 ORTHO05D000129 2.2e-09 65.5 69 52.2
BcaB06g26177 Brassica carinata HOM05D000209 ORTHO05D000129 3.8e-09 64.7 70 51.4
AL3G41630 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.1e-08 63.2 69 50.7
Thhalv10022418m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.9e-08 62.4 67 56.7
CARHR096970 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.5e-08 62.0 67 52.2
C05p42950 Brassica napus HOM05D000209 ORTHO05D000129 3.2e-08 61.6 69 50.7
BolC5t33025H Brassica oleracea HOM05D000209 ORTHO05D000129 3.2e-08 61.6 69 50.7
AL3G41610 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.2e-08 61.2 67 50.7
Carub.0006s2875 Capsella rubella HOM05D000209 ORTHO05D000129 5.5e-08 60.8 69 49.3
AL3G41660 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 9.4e-08 60.1 66 48.5
Thhalv10022361m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.7e-07 58.5 69 52.2
AL3G35130 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.7e-07 57.8 65 50.8
AL3G41620 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.0e-07 57.0 69 46.4
BcaC05g28236 Brassica carinata HOM05D000209 ORTHO05D000129 8.0e-07 57.0 69 50.7
C05p42850 Brassica napus HOM05D000209 ORTHO05D000129 8.0e-07 57.0 69 50.7
BolC5t33014H Brassica oleracea HOM05D000209 ORTHO05D000129 8.0e-07 57.0 69 50.7
Thhalv10012157m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 8.0e-07 57.0 67 47.8
AT4G10190 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.4e-06 56.2 49 53.1
CARHR096980 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.0e-06 55.1 50 52.0
Carub.0003s2581 Capsella rubella HOM05D000209 ORTHO05D000129 4.0e-06 54.7 51 54.9
Thhalv10022141m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 4.0e-06 54.7 43 55.8


User provided reference genes

Program Settings