Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g28379 Brassica carinata HOM05D031504 ORTHO05D032805 8.4e-31 136.3 67 100.0
BcaB06g26638 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-12 76.3 50 68.0
A01p22490 Brassica napus HOM05D000313 ORTHO05D000065 6.7e-12 73.6 45 75.6
A05p19880 Brassica napus HOM05D031504 ORTHO05D042447 1.5e-11 72.4 48 64.6
BraA05t20893Z Brassica rapa HOM05D031504 ORTHO05D042447 1.5e-11 72.4 48 64.6
C06p23850 Brassica napus HOM05D000313 ORTHO05D000065 2.8e-10 68.2 48 60.4
Thhalv10002234m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 2.8e-10 68.2 47 59.6
BolC6t37553H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-09 66.2 48 58.3
BcaC07g39432 Brassica carinata HOM05D010481 ORTHO05D017627 5.3e-09 63.9 46 63.0
C07p19990 Brassica napus HOM05D010481 ORTHO05D017627 5.3e-09 63.9 46 63.0
C08p24710 Brassica napus HOM05D010481 ORTHO05D017627 5.3e-09 63.9 46 63.0
BolC2t10736H Brassica oleracea HOM05D010481 ORTHO05D017627 5.3e-09 63.9 46 63.0
BolC7t42518H Brassica oleracea HOM05D010481 ORTHO05D017627 5.3e-09 63.9 46 63.0
BolC8t50085H Brassica oleracea HOM05D010481 ORTHO05D017627 5.3e-09 63.9 46 63.0
BcaC04g18606 Brassica carinata HOM05D000313 ORTHO05D000065 2.6e-08 61.6 55 54.5
C08p15350 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-08 61.6 46 65.2
C09p57200 Brassica napus HOM05D000313 ORTHO05D000065 3.4e-08 61.2 55 56.4
BraA09t37856Z Brassica rapa HOM05D000313 ORTHO05D000065 3.4e-08 61.2 55 56.4
BcaC04g22281 Brassica carinata HOM05D000313 ORTHO05D000065 7.6e-08 60.1 44 63.6
BcaC07g37331 Brassica carinata HOM05D000313 ORTHO05D000065 7.6e-08 60.1 48 56.2
A08p07480 Brassica napus HOM05D010481 ORTHO05D017550 7.6e-08 60.1 44 63.6
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 7.6e-08 60.1 46 65.2
C08p07700 Brassica napus HOM05D000313 ORTHO05D000065 7.6e-08 60.1 48 56.2
BolC8t47617H Brassica oleracea HOM05D000313 ORTHO05D000065 7.6e-08 60.1 48 56.2
BraA08t32767Z Brassica rapa HOM05D010481 ORTHO05D017550 7.6e-08 60.1 44 63.6
BraA09t35833Z Brassica rapa HOM05D000313 ORTHO05D000065 7.6e-08 60.1 55 54.5
BcaB05g23049 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-07 59.3 46 58.7
BcaC05g25218 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-07 59.3 46 63.0
A01p33580 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-07 59.3 55 52.7
C03p81680 Brassica napus HOM05D010481 ORTHO05D032805 1.3e-07 59.3 48 60.4
BolC9t55032H Brassica oleracea HOM05D000313 ORTHO05D000065 1.3e-07 59.3 42 64.3
BcaB08g35222 Brassica carinata HOM05D000313 ORTHO05D000065 1.7e-07 58.9 51 52.9
C05p47720 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-07 58.9 45 66.7
C08p23390 Brassica napus HOM05D000313 ORTHO05D015528 1.7e-07 58.9 45 66.7
BolC5t33481H Brassica oleracea HOM05D000313 ORTHO05D000065 1.7e-07 58.9 45 66.7
BcaC07g36843 Brassica carinata HOM05D000313 ORTHO05D000065 2.9e-07 58.2 47 59.6
C08p02170 Brassica napus HOM05D000313 ORTHO05D000065 2.9e-07 58.2 47 59.6
BraA06t24916Z Brassica rapa HOM05D000313 ORTHO05D000065 2.9e-07 58.2 45 62.2
BcaC07g36916 Brassica carinata HOM05D000313 ORTHO05D000065 3.8e-07 57.8 47 59.6
BcaC09g50771 Brassica carinata HOM05D000313 ORTHO05D000065 3.8e-07 57.8 43 65.1
BcaC09g50772 Brassica carinata HOM05D000313 ORTHO05D000065 3.8e-07 57.8 43 65.1
C01p21020 Brassica napus HOM05D000313 ORTHO05D000065 3.8e-07 57.8 43 65.1
C04p06280 Brassica napus HOM05D000313 ORTHO05D000065 3.8e-07 57.8 47 59.6
BolC5t29849H Brassica oleracea HOM05D000313 ORTHO05D000065 3.8e-07 57.8 46 60.9
BolC8t46904H Brassica oleracea HOM05D000313 ORTHO05D000065 3.8e-07 57.8 47 59.6
BcaNung02470 Brassica carinata HOM05D000313 ORTHO05D000065 4.9e-07 57.4 45 64.4
A09p24570 Brassica napus HOM05D000313 ORTHO05D000065 4.9e-07 57.4 45 62.2
C03p49020 Brassica napus HOM05D000313 ORTHO05D000065 4.9e-07 57.4 45 60.0
C05p50150 Brassica napus HOM05D000313 ORTHO05D000065 4.9e-07 57.4 45 64.4
C07p40630 Brassica napus HOM05D000313 ORTHO05D000065 4.9e-07 57.4 45 64.4
C08p27490 Brassica napus HOM05D000313 ORTHO05D000065 4.9e-07 57.4 48 56.2
C09p21420 Brassica napus HOM05D000313 ORTHO05D000065 4.9e-07 57.4 44 61.4
BolC3t17179H Brassica oleracea HOM05D000313 ORTHO05D000065 4.9e-07 57.4 45 60.0
BcaB01g00816 Brassica carinata HOM05D000313 ORTHO05D000065 6.5e-07 57.0 44 65.9
A01p07440 Brassica napus HOM05D000313 ORTHO05D000065 6.5e-07 57.0 45 57.8
A08p13660 Brassica napus HOM05D000313 ORTHO05D000065 6.5e-07 57.0 45 57.8
BcaB03g15206 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-06 56.2 45 62.2
A03p65540 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-06 56.2 46 60.9
C01p48110 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-06 56.2 47 57.4
BcaC06g36574 Brassica carinata HOM05D000313 ORTHO05D000065 1.4e-06 55.8 47 57.4
BcaC07g37052 Brassica carinata HOM05D000313 ORTHO05D000065 1.4e-06 55.8 45 55.6
C02p38590 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-06 55.8 43 60.5
BolC2t09876H Brassica oleracea HOM05D000313 ORTHO05D000065 1.4e-06 55.8 43 60.5
BolC9t58587H Brassica oleracea HOM05D000313 ORTHO05D000065 1.4e-06 55.8 42 61.9
BcaB05g24308 Brassica carinata HOM05D000313 ORTHO05D000065 1.9e-06 55.5 45 62.2
BcaB07g33685 Brassica carinata HOM05D000313 ORTHO05D000065 1.9e-06 55.5 45 57.8
BcaB07g33686 Brassica carinata HOM05D000313 ORTHO05D000065 1.9e-06 55.5 45 57.8
C08p19870 Brassica napus HOM05D042196 ORTHO05D031843 1.9e-06 55.5 48 54.2
BolC2t12325H Brassica oleracea HOM05D000313 ORTHO05D000065 1.9e-06 55.5 58 48.3
BcaB06g27070 Brassica carinata HOM05D000313 ORTHO05D000065 2.5e-06 55.1 43 60.5
C07p02730 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-06 55.1 47 57.4
BcaB07g33221 Brassica carinata HOM05D048909 ORTHO05D000065 3.2e-06 54.7 48 54.2
BcaC03g15710 Brassica carinata HOM05D000313 ORTHO05D000065 3.2e-06 54.7 47 55.3
BcaC05g27392 Brassica carinata HOM05D000313 ORTHO05D000065 3.2e-06 54.7 60 45.0
BcaC07g37400 Brassica carinata HOM05D000313 ORTHO05D000065 3.2e-06 54.7 45 55.6
BcaC09g48338 Brassica carinata HOM05D000313 ORTHO05D000065 3.2e-06 54.7 45 55.6
C01p51210 Brassica napus HOM05D000313 ORTHO05D000065 3.2e-06 54.7 45 55.6
C08p08710 Brassica napus HOM05D000313 ORTHO05D000065 3.2e-06 54.7 45 55.6
BolC2t11781H Brassica oleracea HOM05D000313 ORTHO05D000065 3.2e-06 54.7 45 55.6
BolC8t47721H Brassica oleracea HOM05D000313 ORTHO05D000065 3.2e-06 54.7 45 55.6
BcaC06g34590 Brassica carinata HOM05D000313 ORTHO05D000065 4.2e-06 54.3 48 54.2
A01p36390 Brassica napus HOM05D000096 ORTHO05D000045 4.2e-06 54.3 45 55.6
BcaC02g10521 Brassica carinata HOM05D000313 ORTHO05D000065 5.5e-06 53.9 47 53.2
A06p31400 Brassica napus HOM05D000313 ORTHO05D000065 5.5e-06 53.9 46 54.3
A09p40830 Brassica napus HOM05D000313 ORTHO05D000065 5.5e-06 53.9 46 54.3
BcaC02g10550 Brassica carinata HOM05D000313 ORTHO05D000065 7.1e-06 53.5 47 55.3
BcaC06g36447 Brassica carinata HOM05D003334 ORTHO05D000065 7.1e-06 53.5 48 45.8
BcaC07g39367 Brassica carinata HOM05D000313 ORTHO05D000065 7.1e-06 53.5 55 50.9
C02p31920 Brassica napus HOM05D014454 ORTHO05D033380 7.1e-06 53.5 44 61.4
C04p27570 Brassica napus HOM05D000313 ORTHO05D000065 7.1e-06 53.5 47 55.3
C08p23910 Brassica napus HOM05D000313 ORTHO05D000065 7.1e-06 53.5 55 50.9
BolC2t06629H Brassica oleracea HOM05D000313 ORTHO05D000065 7.1e-06 53.5 48 54.2
BolC2t10639H Brassica oleracea HOM05D000313 ORTHO05D000065 7.1e-06 53.5 47 55.3
BolC4t24298H Brassica oleracea HOM05D000313 ORTHO05D000065 7.1e-06 53.5 47 55.3
BcaC05g28890 Brassica carinata HOM05D000313 ORTHO05D000065 9.3e-06 53.1 45 62.2
C02p32630 Brassica napus HOM05D000313 ORTHO05D000065 9.3e-06 53.1 47 53.2
C02p45780 Brassica napus HOM05D000313 ORTHO05D000065 9.3e-06 53.1 47 53.2
C07p04090 Brassica napus HOM05D003334 ORTHO05D004076 9.3e-06 53.1 48 45.8
C09p17240 Brassica napus HOM05D000313 ORTHO05D000065 9.3e-06 53.1 47 53.2
C09p62680 Brassica napus HOM05D000313 ORTHO05D000065 9.3e-06 53.1 45 53.3
BolC3t20537H Brassica oleracea HOM05D000313 ORTHO05D000065 9.3e-06 53.1 40 60.0
BolC5t33765H Brassica oleracea HOM05D000313 ORTHO05D000065 9.3e-06 53.1 45 62.2
BolC7t42461H Brassica oleracea HOM05D000313 ORTHO05D000065 9.3e-06 53.1 47 53.2
BolC9t54626H Brassica oleracea HOM05D000313 ORTHO05D000065 9.3e-06 53.1 47 53.2


User provided reference genes

Program Settings