Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g28330 Brassica carinata HOM05D004579 ORTHO05D005376 9.1e-148 526.9 278 100.0
BolC5t33107H Brassica oleracea HOM05D004579 ORTHO05D005376 2.1e-144 515.8 273 100.0
C05p43910 Brassica napus HOM05D004579 ORTHO05D005376 1.7e-141 506.1 273 98.2
A05p28470 Brassica napus HOM05D004579 ORTHO05D005376 1.4e-135 486.5 273 96.3
BraA05t21726Z Brassica rapa HOM05D004579 ORTHO05D005376 1.5e-134 483.0 273 94.5
BcaB06g26108 Brassica carinata HOM05D004579 ORTHO05D005376 1.4e-124 449.9 273 89.0
Sp3g18440 Schrenkiella parvula HOM05D004579 ORTHO05D005376 3.3e-113 412.1 266 84.6
AT3G20430 Arabidopsis thaliana HOM05D004579 ORTHO05D005376 3.9e-98 362.1 265 77.0
CARHR096140 Cardamine hirsuta HOM05D004579 ORTHO05D005376 1.9e-97 359.8 266 78.6
Carub.0003s2037 Capsella rubella HOM05D004579 ORTHO05D005376 2.0e-94 349.7 266 75.6
Thhalv10021403m.g Eutrema salsugineum HOM05D004579 ORTHO05D005376 4.5e-94 348.6 266 75.9
Aa31LG8G7240 Aethionema arabicum HOM05D004579 ORTHO05D005376 8.4e-85 317.8 267 71.9
AL3G34150 Arabidopsis lyrata HOM05D004579 ORTHO05D005376 3.7e-80 302.4 255 72.2
THA.LOC104811250 Tarenaya hassleriana HOM05D004579 ORTHO05D005376 1.0e-58 231.1 164 75.0
Manes.03G046600 Manihot esculenta HOM05D004579 ORTHO05D005376 3.1e-55 219.5 263 49.8
Atru.chr7.2020 Acer truncatum HOM05D004579 ORTHO05D005376 1.3e-53 214.2 264 50.8
Gohir.D07G022900 Gossypium hirsutum HOM05D004579 ORTHO05D005376 6.5e-53 211.8 261 47.9
Thecc.09G051200 Theobroma cacao HOM05D004579 ORTHO05D005376 6.5e-53 211.8 255 54.9
Gorai.001G023600 Gossypium raimondii HOM05D004579 ORTHO05D005376 1.1e-52 211.1 261 47.5
Duzib168G1792 Durio zibethinus HOM05D004579 ORTHO05D005376 1.4e-52 210.7 259 51.0
Prupe.1G414900 Prunus persica HOM05D004579 ORTHO05D005376 4.2e-52 209.1 267 50.9
TPR.G13109 Trifolium pratense HOM05D004579 ORTHO05D005376 4.7e-51 205.7 260 50.0
QL02p103256 Quercus lobata HOM05D004579 ORTHO05D005376 1.0e-50 204.5 260 48.5
QL07p000612 Quercus lobata HOM05D004579 ORTHO05D005376 1.8e-50 203.8 263 49.0
Duzib187G0056 Durio zibethinus HOM05D004579 ORTHO05D005376 5.2e-50 202.2 261 51.7
TWI34G1837 Tripterygium wilfordii HOM05D004579 ORTHO05D005376 8.8e-50 201.4 259 51.0
Glyma.06G050800 Glycine max HOM05D004579 ORTHO05D005376 1.1e-49 201.1 265 47.9
Lj1g0026801 Lotus japonicus HOM05D004579 ORTHO05D005376 1.1e-49 201.1 285 47.7
Ca_15870_v3 Cicer arietinum L. HOM05D004579 ORTHO05D005376 2.0e-49 200.3 265 47.9
Glyma.04G049800 Glycine max HOM05D004579 ORTHO05D005376 2.0e-49 200.3 265 47.9
Potri.006G232800 Populus trichocarpa HOM05D004579 ORTHO05D005376 2.0e-49 200.3 268 49.3
FAN24G0041 Fragaria x ananassa HOM05D004579 ORTHO05D005376 7.4e-49 198.4 272 48.9
Gohir.D05G045500 Gossypium hirsutum HOM05D004579 ORTHO05D005376 7.4e-49 198.4 262 51.9
Sabra06G0181300 Salix brachista HOM05D004579 ORTHO05D005376 7.4e-49 198.4 271 49.4
CiPaw.15G041800 Carya illinoinensis HOM05D004579 ORTHO05D005376 1.3e-48 197.6 260 50.4
FAN15G2153 Fragaria x ananassa HOM05D004579 ORTHO05D005376 1.3e-48 197.6 273 48.4
Gorai.009G046700 Gossypium raimondii HOM05D004579 ORTHO05D005376 1.7e-48 197.2 260 52.3
Lsat_1_v5_gn_6_7421 Lactuca sativa HOM05D004579 ORTHO05D005376 2.2e-48 196.8 262 48.9
Cfa017933 Carpinus fangiana HOM05D004579 ORTHO05D005376 2.8e-48 196.4 266 48.1
FvH4_2g32180 Fragaria vesca HOM05D004579 ORTHO05D005376 2.8e-48 196.4 276 48.9
COL.COLO4_21028 Corchorus olitorius HOM05D004579 ORTHO05D005376 4.8e-48 195.7 260 48.5
Gohir.A05G043900 Gossypium hirsutum HOM05D004579 ORTHO05D005376 4.8e-48 195.7 281 47.7
Phvul.009G076200 Phaseolus vulgaris HOM05D004579 ORTHO05D005376 6.3e-48 195.3 264 48.1
arahy.Tifrunner.gnm1.ann1.Y2NPND Arachis hypogaea HOM05D004579 ORTHO05D005376 1.4e-47 194.1 267 49.1
FAN20G3218 Fragaria x ananassa HOM05D004579 ORTHO05D005376 1.4e-47 194.1 271 48.0
arahy.Tifrunner.gnm1.ann1.C5JVH4 Arachis hypogaea HOM05D004579 ORTHO05D005376 2.4e-47 193.4 263 46.8
FAN27G3258 Fragaria x ananassa HOM05D004579 ORTHO05D005376 3.1e-47 193.0 273 46.9
Psat5g036520 Pisum sativum HOM05D004579 ORTHO05D005376 4.1e-47 192.6 265 49.4
Medtr1g016630 Medicago truncatula HOM05D004579 ORTHO05D005376 7.0e-47 191.8 260 47.3
ClCG06G000280 Citrullus lanatus HOM05D004579 ORTHO05D005376 9.1e-47 191.4 255 48.2
Lalb_Chr24g0399591 Lupinus albus HOM05D004579 ORTHO05D005376 9.1e-47 191.4 256 46.5
TWI63G0708 Tripterygium wilfordii HOM05D004579 ORTHO05D005376 9.1e-47 191.4 266 50.0
Ciclev10009210m.g Citrus clementina HOM05D004579 ORTHO05D005376 1.2e-46 191.0 262 50.4
arahy.Tifrunner.gnm1.ann1.A3GFYF Arachis hypogaea HOM05D004579 ORTHO05D005376 2.6e-46 189.9 267 48.3
CANSAT25G0619 Cannabis sativa HOM05D004579 ORTHO05D005376 4.5e-46 189.1 263 43.7
Glyma.14G092900 Glycine max HOM05D004579 ORTHO05D005376 4.5e-46 189.1 259 47.5
Manes.16G077900 Manihot esculenta HOM05D004579 ORTHO05D005376 5.9e-46 188.7 254 47.6
Eucgr.C00634 Eucalyptus grandis HOM05D004579 ORTHO05D005376 1.0e-45 188.0 253 49.0
HanXRQChr08g0226451 Helianthus annuus HOM05D004579 ORTHO05D005376 1.0e-45 188.0 264 48.1
HanXRQChr08g0226601 Helianthus annuus HOM05D004579 ORTHO05D005376 1.0e-45 188.0 264 48.1
VMungo0647G1140 Vigna mungo HOM05D004579 ORTHO05D005376 1.0e-45 188.0 261 46.0
Ca_02416_v3 Cicer arietinum L. HOM05D004579 ORTHO05D005376 2.9e-45 186.4 258 47.3
Gohir.A07G022140 Gossypium hirsutum HOM05D004579 ORTHO05D005376 5.0e-45 185.7 231 48.9
arahy.Tifrunner.gnm1.ann1.XC2JTE Arachis hypogaea HOM05D004579 ORTHO05D005376 6.5e-45 185.3 262 45.0
TAR383G0831 Trochodendron aralioides HOM05D004579 ORTHO05D005376 1.1e-44 184.5 271 45.4
MELO3C022510.2 Cucumis melo HOM05D004579 ORTHO05D005376 1.9e-44 183.7 270 46.7
Lalb_Chr22g0355991 Lupinus albus HOM05D004579 ORTHO05D005376 1.9e-44 183.7 260 46.9
Rhsim07G0143600 Rhododendron simsii HOM05D004579 ORTHO05D005376 3.2e-44 183.0 272 46.7
Nn8g38954 Nelumbo nucifera HOM05D004579 ORTHO05D005376 7.2e-44 181.8 270 42.6
Sc09g0009680 Simmondsia chinensis HOM05D004579 ORTHO05D005376 2.1e-43 180.3 267 46.8
Migut.A00154 Erythranthe guttata HOM05D004579 ORTHO05D005376 3.6e-43 179.5 261 46.7
Dinv23423 Davidia involucrata HOM05D004579 ORTHO05D005376 8.0e-43 178.3 266 46.6
CSS0030937 Camellia sinensis var. sinensis HOM05D004579 ORTHO05D005376 1.0e-42 177.9 266 46.2
SGA_v2.0_scaffold88G27218 Striga asiatica HOM05D004579 ORTHO05D005376 1.4e-42 177.6 265 45.7
HanXRQChr09g0251171 Helianthus annuus HOM05D004579 ORTHO05D005376 8.8e-42 174.9 243 49.0
MSTRG.11672 Avicennia marina HOM05D004579 ORTHO05D005376 1.5e-41 174.1 263 44.9
DCAR_019057 Daucus carota HOM05D004579 ORTHO05D005376 2.0e-41 173.7 260 46.2
Hma1.2p1_1266F.1_g271430 Hydrangea macrophylla HOM05D004579 ORTHO05D005376 3.4e-41 172.9 265 46.8
Ah.11g044630 Amaranthus hybridus HOM05D004579 ORTHO05D005376 7.5e-41 171.8 264 43.9
Dinv27966 Davidia involucrata HOM05D004579 ORTHO05D005376 1.3e-40 171.0 257 41.6
Sed0027918 Sechium edule HOM05D004579 ORTHO05D005376 1.7e-40 170.6 191 53.4
Lj5g0003794 Lotus japonicus HOM05D004579 ORTHO05D005376 2.2e-40 170.2 258 46.5
Actinidia14703 Actinidia chinensis HOM05D004579 ORTHO05D005376 2.8e-40 169.9 172 52.9
Psat6g019640 Pisum sativum HOM05D004579 ORTHO05D005376 2.8e-40 169.9 250 42.0
AUR62022041 Chenopodium quinoa HOM05D004579 ORTHO05D005376 3.7e-40 169.5 171 53.2
Cc08_g10350 Coffea canephora HOM05D004579 ORTHO05D005376 3.7e-40 169.5 273 42.1
SalBow4G3199 Salvia bowleyana HOM05D004579 ORTHO05D005376 3.7e-40 169.5 263 45.6
Solyc04g080350.4 Solanum lycopersicum HOM05D004579 ORTHO05D005376 3.7e-40 169.5 257 46.3
unitig_736.g22340 Utricularia gibba HOM05D004579 ORTHO05D005376 3.7e-40 169.5 261 40.6
GSVIVG01035344001 Vitis vinifera HOM05D004579 ORTHO05D005376 3.7e-40 169.5 209 50.7
Sed0005208 Sechium edule HOM05D004579 ORTHO05D005376 4.8e-40 169.1 265 43.8
VMungo1309G2710 Vigna mungo HOM05D004579 ORTHO05D005376 4.8e-40 169.1 261 46.0
PGR031G0410 Punica granatum HOM05D004579 ORTHO05D005376 6.3e-40 168.7 258 44.6
PGSC0003DMG400005151 Solanum tuberosum HOM05D004579 ORTHO05D005376 8.3e-40 168.3 255 46.7
EL10Ac2g03929 Beta vulgaris HOM05D004579 ORTHO05D005376 1.4e-39 167.5 263 44.9
FAN24G1203 Fragaria x ananassa HOM05D004579 ORTHO05D005376 1.4e-39 167.5 272 41.5
Sopen04g033940 Solanum pennellii HOM05D004579 ORTHO05D005376 1.8e-39 167.2 252 45.6
Nitab4.5_0000359g0090 Nicotiana tabacum HOM05D004579 ORTHO05D005376 2.4e-39 166.8 261 45.6
Peaxi162Scf00436g00719 Petunia axillaris HOM05D004579 ORTHO05D005376 3.1e-39 166.4 263 44.1
Nitab4.5_0006174g0020 Nicotiana tabacum HOM05D004579 ORTHO05D005376 7.0e-39 165.2 260 45.8
Nitab4.5_0008290g0030 Nicotiana tabacum HOM05D004579 ORTHO05D005376 7.0e-39 165.2 258 45.0
Hund03357 Selenicereus undatus HOM05D004579 ORTHO05D005376 9.1e-39 164.9 286 40.2
Haze_18215 Corylus avellana HOM05D004579 ORTHO05D005376 2.0e-38 163.7 327 39.1
CsaV3_6G006070 Cucumis sativus L. HOM05D004579 ORTHO05D005376 4.5e-38 162.5 263 43.0
CAN.G1226.13 Capsicum annuum HOM05D004579 ORTHO05D005376 1.0e-37 161.4 261 43.7
Aqoxy7G00927 Aquilegia oxysepala HOM05D004579 ORTHO05D005376 1.3e-37 161.0 269 45.4
TAR626G1184 Trochodendron aralioides HOM05D004579 ORTHO05D005376 1.3e-37 161.0 212 49.5
CDE02G1740 Ceratophyllum demersum HOM05D004579 ORTHO05D005376 4.2e-36 156.0 272 39.3
Os01g0559200 Oryza sativa ssp. japonica HOM05D004579 ORTHO05D005376 7.2e-36 155.2 268 42.5
Zm00001eb356770 Zea mays HOM05D004579 ORTHO05D005376 2.1e-35 153.7 261 44.1
ATR0789G072 Amborella trichopoda HOM05D004579 ORTHO05D005376 6.1e-35 152.1 274 40.5
Oeu018654.1 Olea europaea HOM05D004579 ORTHO05D005376 8.0e-35 151.8 180 52.2
PGR142G1482 Punica granatum HOM05D004579 ORTHO05D005376 1.8e-34 150.6 256 42.2
MBI01_g16584_MAGBIO Magnolia biondii HOM05D004579 ORTHO05D005376 1.5e-33 147.5 265 40.8
PSO210G6474 Papaver somniferum HOM05D004579 ORTHO05D005376 2.0e-33 147.1 275 44.4
ECA233G0431 Erigeron canadensis HOM05D004579 ORTHO05D005376 5.7e-33 145.6 276 40.9
HPP92_014384 Vanilla planifolia HOM05D004579 ORTHO05D005376 2.2e-32 143.7 251 40.2
Oeu037326.2 Olea europaea HOM05D004579 ORTHO05D005376 4.8e-32 142.5 298 37.2
PSO017G1019 Papaver somniferum HOM05D004579 ORTHO05D005376 6.3e-32 142.1 167 47.9
Nn6g35393 Nelumbo nucifera HOM05D004579 ORTHO05D005376 8.3e-32 141.7 255 42.4
PSO210G6518 Papaver somniferum HOM05D004579 ORTHO05D005376 8.3e-32 141.7 273 41.8
Hund19474 Selenicereus undatus HOM05D004579 ORTHO05D005376 1.0e-26 124.8 367 32.2
CSS0042880 Camellia sinensis var. sinensis HOM05D004579 ORTHO05D005376 1.4e-26 124.4 158 44.9
TPR.G25353 Trifolium pratense HOM05D004579 ORTHO05D005376 6.8e-26 122.1 133 48.9
Cpa.g.sc84.21 Carica papaya HOM05D004579 ORTHO05D005376 9.8e-25 118.2 256 42.2
SEGI_10906 Sequoiadendron giganteum HOM05D004579 ORTHO05D005376 1.7e-24 117.5 192 41.1
RcHm_v2.0_Chr6g0310501 Rosa chinensis HOM05D004579 ORTHO05D005376 2.4e-23 113.6 142 46.5
MSTRG.25939 Avicennia marina HOM05D004579 ORTHO05D005376 4.1e-23 112.8 154 48.1
AUR62009186 Chenopodium quinoa HOM05D004579 ORTHO05D005376 9.2e-23 111.7 138 48.6
Mapoly0091s0021 Marchantia polymorpha HOM05D004579 ORTHO05D005376 1.5e-20 104.4 207 40.1
PSO063G4337 Papaver somniferum HOM05D004579 ORTHO05D005376 1.5e-20 104.4 218 34.4
vmacro05280 Vaccinium macrocarpon HOM05D004579 ORTHO05D005376 3.3e-20 103.2 147 43.5
AagrBONN_evm.TU.Sc2ySwM_117.2939 Anthoceros agrestis HOM05D004579 ORTHO05D005376 8.9e-18 95.1 91 49.5
Actinidia18195 Actinidia chinensis HOM05D004579 ORTHO05D005376 2.6e-17 93.6 132 52.3
RcHm_v2.0_Chr6g0310491 Rosa chinensis HOM05D004579 ORTHO05D005376 4.4e-17 92.8 135 51.9
CBR_g36456 Chara braunii HOM05D004579 ORTHO05D005376 9.8e-17 91.7 146 35.6
vmacro00165 Vaccinium macrocarpon HOM05D004579 ORTHO05D005376 8.3e-16 88.6 258 35.3
arahy.Tifrunner.gnm1.ann1.E1I8FT Arachis hypogaea HOM05D004579 ORTHO05D005376 1.1e-15 88.2 166 42.2
Phvul.001G033700 Phaseolus vulgaris HOM05D004579 ORTHO05D005376 3.5e-14 83.2 151 33.1
Pp3c10_2240 Physcomitrium patens HOM05D004579 ORTHO05D005376 1.0e-13 81.6 196 37.2
Hma1.2p1_1944F.1_g308530 Hydrangea macrophylla HOM05D004579 ORTHO05D005376 1.3e-13 81.3 133 39.8
PGSC0003DMG400032806 Solanum tuberosum HOM05D004579 ORTHO05D005376 8.6e-13 78.6 57 59.6
TPR.G25355 Trifolium pratense HOM05D004579 ORTHO05D005376 3.6e-11 73.2 132 45.5
QL03p011522 Quercus lobata HOM05D004579 ORTHO05D005376 6.2e-11 72.4 55 61.8
PSO017G0877 Papaver somniferum HOM05D004579 ORTHO05D005376 9.2e-07 58.5 39 61.5
PSO017G5975 Papaver somniferum HOM05D004579 ORTHO05D005376 9.2e-07 58.5 39 61.5
MCO09G383 Micromonas commoda HOM05D004579 ORTHO05D005376 3.5e-06 56.6 75 36.0


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