Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g28316 Brassica carinata HOM05D010509 ORTHO05D011067 1.6e-65 252.7 131 100.0
C05p43770 Brassica napus HOM05D010509 ORTHO05D011067 3.6e-62 241.5 131 96.2
A05p28290 Brassica napus HOM05D010509 ORTHO05D011067 6.8e-61 237.3 131 94.7
BolC5t33093H Brassica oleracea HOM05D010509 ORTHO05D011067 6.8e-61 237.3 131 94.7
BraA05t21711Z Brassica rapa HOM05D010509 ORTHO05D011067 6.8e-61 237.3 131 94.7
Sp3g18570 Schrenkiella parvula HOM05D010509 ORTHO05D011067 8.9e-53 210.3 131 84.7
C01p18680 Brassica napus HOM05D010509 ORTHO05D011067 3.4e-52 208.4 131 82.4
BolC1t01796H Brassica oleracea HOM05D010509 ORTHO05D011067 3.4e-52 208.4 131 82.4
BcaB04g20646 Brassica carinata HOM05D010509 ORTHO05D011067 3.7e-51 204.9 132 81.8
A01p34240 Brassica napus HOM05D010509 ORTHO05D011067 6.4e-51 204.1 131 81.7
BraA01t03523Z Brassica rapa HOM05D010509 ORTHO05D011067 6.4e-51 204.1 131 81.7
BcaC09g50965 Brassica carinata HOM05D010509 ORTHO05D011067 1.4e-50 203.0 131 81.7
C01p43630 Brassica napus HOM05D010509 ORTHO05D011067 2.4e-50 202.2 131 80.2
BolC1t04323H Brassica oleracea HOM05D010509 ORTHO05D011067 2.4e-50 202.2 131 80.2
BcaC09g49001 Brassica carinata HOM05D010509 ORTHO05D011067 5.4e-50 201.1 131 80.2
CARHR096340 Cardamine hirsuta HOM05D010509 ORTHO05D011067 1.6e-49 199.5 131 80.2
AT3G20557 Arabidopsis thaliana HOM05D010509 ORTHO05D011067 1.9e-47 192.6 131 79.4
AL3G34410 Arabidopsis lyrata HOM05D010509 ORTHO05D011067 7.6e-44 180.6 131 75.6
Carub.0003s2053 Capsella rubella HOM05D010509 ORTHO05D011067 1.6e-41 172.9 136 73.5
Aa31LG8G7360 Aethionema arabicum HOM05D010509 ORTHO05D011067 1.2e-25 120.2 132 56.1
Thhalv10022363m.g Eutrema salsugineum HOM05D010509 ORTHO05D011067 2.5e-23 112.5 90 68.9
AL1G58650 Arabidopsis lyrata HOM05D010922 ORTHO05D011067 4.3e-15 85.1 197 40.6
CARHR040970 Cardamine hirsuta HOM05D010922 ORTHO05D011067 9.6e-15 84.0 195 40.5
AT1G50930 Arabidopsis thaliana HOM05D010922 ORTHO05D011067 1.3e-14 83.6 198 40.4
Carub.0001s3987 Capsella rubella HOM05D010922 ORTHO05D011067 2.1e-14 82.8 191 40.3
Sp1g37670 Schrenkiella parvula HOM05D010922 ORTHO05D011067 9.0e-13 77.4 199 39.2
Thhalv10011976m.g Eutrema salsugineum HOM05D010922 ORTHO05D011067 1.0e-11 73.9 196 37.2
C06p06090 Brassica napus HOM05D010922 ORTHO05D011067 3.8e-11 72.0 182 37.4
BolC6t35722H Brassica oleracea HOM05D010922 ORTHO05D011067 3.8e-11 72.0 182 37.4
A06p02810 Brassica napus HOM05D010922 ORTHO05D011067 8.4e-11 70.9 182 37.4
BraA06t23488Z Brassica rapa HOM05D010922 ORTHO05D011067 1.1e-10 70.5 182 36.8
BcaB02g11196 Brassica carinata HOM05D010922 ORTHO05D011067 1.9e-10 69.7 191 38.7
BcaB02g11197 Brassica carinata HOM05D010922 ORTHO05D011067 1.9e-10 69.7 191 38.7
BcaB07g33533 Brassica carinata HOM05D010922 ORTHO05D011067 1.9e-10 69.7 180 36.1
BcaC05g27377 Brassica carinata HOM05D010922 ORTHO05D011067 5.5e-10 68.2 190 40.0
A05p19850 Brassica napus HOM05D010922 ORTHO05D011067 5.5e-10 68.2 191 38.7
C05p33110 Brassica napus HOM05D010922 ORTHO05D011067 5.5e-10 68.2 190 40.0
BolC5t32043H Brassica oleracea HOM05D010922 ORTHO05D011067 5.5e-10 68.2 190 40.0
BraA05t20890Z Brassica rapa HOM05D010922 ORTHO05D011067 5.5e-10 68.2 191 38.7
THA.LOC104816923 Tarenaya hassleriana HOM05D010922 ORTHO05D011067 2.8e-06 55.8 180 33.9
MD03G1209200 Malus domestica HOM05D002846 ORTHO05D002692 8.2e-06 54.3 194 30.9
Prupe.4G205800 Prunus persica HOM05D002846 ORTHO05D002692 8.2e-06 54.3 177 32.2


User provided reference genes

Program Settings