Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g28284 Brassica carinata HOM05D020038 ORTHO05D027415 1.1e-206 723.0 360 100.0
BcaC05g28283 Brassica carinata HOM05D000843 ORTHO05D000698 4.0e-79 299.3 158 94.3
BolC5t33063H Brassica oleracea HOM05D000843 ORTHO05D000698 2.0e-78 297.0 158 93.7
A05p28010 Brassica napus HOM05D000843 ORTHO05D000698 1.1e-76 291.2 158 93.0
BraA05t21684Z Brassica rapa HOM05D000843 ORTHO05D000698 3.3e-73 279.6 159 90.6
BcaB06g26147 Brassica carinata HOM05D000843 ORTHO05D000698 3.8e-61 239.6 176 76.7
CARHR096600 Cardamine hirsuta HOM05D000843 ORTHO05D000698 4.0e-55 219.5 164 76.2
BraA03t13345Z Brassica rapa HOM05D000843 ORTHO05D000698 1.7e-53 214.2 163 74.8
A03p41910 Brassica napus HOM05D000843 ORTHO05D000698 4.9e-53 212.6 163 74.2
BcaB04g20629 Brassica carinata HOM05D000843 ORTHO05D000698 3.5e-51 206.5 166 74.7
BcaB04g19124 Brassica carinata HOM05D000843 ORTHO05D000698 4.6e-51 206.1 163 74.2
Sp3g18790 Schrenkiella parvula HOM05D000843 ORTHO05D000698 4.6e-51 206.1 166 73.5
C03p51280 Brassica napus HOM05D000843 ORTHO05D000698 7.9e-51 205.3 163 72.4
BolC3t17417H Brassica oleracea HOM05D000843 ORTHO05D000698 3.0e-50 203.4 163 71.8
A01p34040 Brassica napus HOM05D000843 ORTHO05D000698 1.5e-49 201.1 166 71.7
BcaC09g49020 Brassica carinata HOM05D000843 ORTHO05D000698 8.2e-48 195.3 166 70.5
C01p43440 Brassica napus HOM05D000843 ORTHO05D000698 1.1e-47 194.9 166 70.5
BolC1t04303H Brassica oleracea HOM05D000843 ORTHO05D000698 1.1e-47 194.9 166 70.5
Thhalv10020292m.g Eutrema salsugineum HOM05D000843 ORTHO05D000698 2.0e-46 190.7 168 68.5
C05p43320 Brassica napus HOM05D000843 ORTHO05D027415 4.5e-46 189.5 103 93.2
AT3G20770 Arabidopsis thaliana HOM05D000843 ORTHO05D000698 1.0e-45 188.3 171 69.0
AL3G34690 Arabidopsis lyrata HOM05D000843 ORTHO05D000698 5.0e-45 186.0 169 68.6
BraA01t03507Z Brassica rapa HOM05D000843 ORTHO05D000698 1.6e-43 181.0 164 66.5
Carub.0003s2073 Capsella rubella HOM05D000843 ORTHO05D000698 3.3e-41 173.3 167 63.5
BcaC01g03540 Brassica carinata HOM05D000843 ORTHO05D000698 5.3e-39 166.0 161 62.1
C05p43310 Brassica napus HOM05D000843 ORTHO05D000698 6.9e-31 139.0 102 74.5
THA.LOC104816962 Tarenaya hassleriana HOM05D000843 ORTHO05D000698 1.2e-30 138.3 168 53.6
BolC9t55070H Brassica oleracea HOM05D020038 ORTHO05D106622 3.4e-30 136.7 189 44.4
Aa31LG8G7530 Aethionema arabicum HOM05D000843 ORTHO05D000698 4.5e-30 136.3 166 57.2
THA.LOC104800488 Tarenaya hassleriana HOM05D000843 ORTHO05D000698 1.9e-28 131.0 182 49.5
THA.LOC104816963 Tarenaya hassleriana HOM05D000843 ORTHO05D000698 9.4e-28 128.6 161 52.8
THA.LOC104826471 Tarenaya hassleriana HOM05D000843 ORTHO05D000698 1.8e-26 124.4 167 46.7
THA.LOC104800487 Tarenaya hassleriana HOM05D000843 ORTHO05D000698 3.9e-26 123.2 170 50.0
Cpa.g.sc103.60 Carica papaya HOM05D000843 ORTHO05D000698 8.2e-24 115.5 164 49.4
COL.COLO4_18362 Corchorus olitorius HOM05D000843 ORTHO05D000698 3.5e-22 110.2 170 45.3
Thecc.09G338000 Theobroma cacao HOM05D000843 ORTHO05D000698 5.9e-22 109.4 165 46.1
Duzib150G0618 Durio zibethinus HOM05D000843 ORTHO05D000698 2.9e-21 107.1 165 44.8
Gohir.A03G034900 Gossypium hirsutum HOM05D000843 ORTHO05D000698 3.2e-20 103.6 164 42.7
Gohir.A13G230100 Gossypium hirsutum HOM05D000843 ORTHO05D000698 5.5e-20 102.8 161 45.3
Gohir.D05G101300 Gossypium hirsutum HOM05D000843 ORTHO05D000698 7.2e-20 102.4 163 44.8
Duzib168G1232 Durio zibethinus HOM05D000843 ORTHO05D000698 1.2e-19 101.7 178 42.1
Duzib170G0752 Durio zibethinus HOM05D000843 ORTHO05D000698 2.1e-19 100.9 165 44.8
Gorai.009G105400 Gossypium raimondii HOM05D000843 ORTHO05D000698 3.6e-19 100.1 163 44.2
QL01p020207 Quercus lobata HOM05D000843 ORTHO05D000698 3.6e-19 100.1 165 44.8
Aa31LG5G8440 Aethionema arabicum HOM05D000843 ORTHO05D000698 4.7e-19 99.8 167 43.1
Gohir.A05G101500 Gossypium hirsutum HOM05D000843 ORTHO05D000698 6.1e-19 99.4 163 44.2
Gohir.A08G196600 Gossypium hirsutum HOM05D000843 ORTHO05D000698 1.0e-18 98.6 162 43.8
Glyma.20G051500 Glycine max HOM05D000843 ORTHO05D000698 1.4e-18 98.2 165 44.2
Gohir.D08G213800 Gossypium hirsutum HOM05D000843 ORTHO05D000698 1.4e-18 98.2 162 43.8
Gorai.004G227800 Gossypium raimondii HOM05D000843 ORTHO05D000698 1.4e-18 98.2 162 43.8
Gorai.003G140600 Gossypium raimondii HOM05D000843 ORTHO05D000698 1.8e-18 97.8 161 43.5
Gohir.D13G235600 Gossypium hirsutum HOM05D000843 ORTHO05D000698 3.0e-18 97.1 161 44.1
AL4G20610 Arabidopsis lyrata HOM05D000843 ORTHO05D000698 4.0e-18 96.7 158 39.2
Glyma.13G076700 Glycine max HOM05D000843 ORTHO05D000698 4.0e-18 96.7 165 43.0
Gorai.013G266300 Gossypium raimondii HOM05D000843 ORTHO05D000698 4.0e-18 96.7 161 44.1
Lj6g0001407 Lotus japonicus HOM05D000843 ORTHO05D000698 1.1e-17 95.1 172 40.7
Gohir.D03G133500 Gossypium hirsutum HOM05D000843 ORTHO05D000698 2.0e-17 94.4 161 42.2
A05p28040 Brassica napus HOM05D000843 ORTHO05D027415 4.4e-17 93.2 74 70.3
Sp4g08230 Schrenkiella parvula HOM05D000843 ORTHO05D000698 5.7e-17 92.8 161 44.1
Ciclev10014617m.g Citrus clementina HOM05D000843 ORTHO05D000698 7.5e-17 92.4 164 37.8
Carub.0004s0754 Capsella rubella HOM05D000843 ORTHO05D000698 1.3e-16 91.7 165 40.6
Thhalv10001938m.g Eutrema salsugineum HOM05D000843 ORTHO05D000698 2.2e-16 90.9 170 41.8
Potri.004G197400 Populus trichocarpa HOM05D000843 ORTHO05D000698 2.2e-16 90.9 157 43.9
BraA05t21686Z Brassica rapa HOM05D000843 ORTHO05D027415 3.7e-16 90.1 74 68.9
AT2G27050 Arabidopsis thaliana HOM05D000843 ORTHO05D000698 6.3e-16 89.4 163 37.4
CiPaw.13G120900 Carya illinoinensis HOM05D000843 ORTHO05D000698 6.3e-16 89.4 164 39.6
Manes.04G052000 Manihot esculenta HOM05D000843 ORTHO05D000698 1.8e-15 87.8 172 40.1
PGR119G0809 Punica granatum HOM05D000843 ORTHO05D000698 7.0e-15 85.9 169 35.5
CARHR119380 Cardamine hirsuta HOM05D000843 ORTHO05D000698 1.2e-14 85.1 164 40.2
Rhsim01G0196400 Rhododendron simsii HOM05D000843 ORTHO05D000698 1.2e-14 85.1 169 37.3
Sed0007953 Sechium edule HOM05D000843 ORTHO05D000698 1.6e-14 84.7 166 36.7
Atru.chr3.2868 Acer truncatum HOM05D000843 ORTHO05D000698 2.0e-14 84.3 165 38.2
BolC6t36246H Brassica oleracea HOM05D020038 ORTHO05D106740 2.0e-14 84.3 46 91.3
A05p24860 Brassica napus HOM05D020038 ORTHO05D032222 2.7e-14 84.0 69 55.1
BraA05t21373Z Brassica rapa HOM05D020038 ORTHO05D032222 2.7e-14 84.0 69 55.1
BcaC05g28286 Brassica carinata HOM05D002786 ORTHO05D005394 4.5e-14 83.2 65 69.2
ClCG03G014100 Citrullus lanatus HOM05D000843 ORTHO05D000698 5.9e-14 82.8 166 36.1
Ca_22181_v3 Cicer arietinum L. HOM05D000843 ORTHO05D000698 1.3e-13 81.6 160 38.8
A03p26790 Brassica napus HOM05D000843 ORTHO05D000698 1.7e-13 81.3 161 39.1
BraA03t11890Z Brassica rapa HOM05D000843 ORTHO05D000698 1.7e-13 81.3 161 39.1
CsaV3_1G042150 Cucumis sativus L. HOM05D000843 ORTHO05D000698 1.7e-13 81.3 167 35.9
Glyma.02G274600 Glycine max HOM05D000843 ORTHO05D000698 6.5e-13 79.3 174 36.2
Atru.chr3.2880 Acer truncatum HOM05D000843 ORTHO05D000698 8.5e-13 79.0 165 37.0
Haze_23673 Corylus avellana HOM05D000843 ORTHO05D000698 1.1e-12 78.6 161 36.0
THA.LOC104826472 Tarenaya hassleriana HOM05D000843 ORTHO05D000698 1.5e-12 78.2 162 38.3
MELO3C015633.2 Cucumis melo HOM05D000843 ORTHO05D000698 1.9e-12 77.8 167 35.3
Potri.009G159200 Populus trichocarpa HOM05D000843 ORTHO05D000698 1.9e-12 77.8 171 35.7
Eucgr.J00631 Eucalyptus grandis HOM05D000843 ORTHO05D000698 3.2e-12 77.0 161 36.0
BcaC01g04919 Brassica carinata HOM05D000843 ORTHO05D000698 5.5e-12 76.3 160 38.1
C03p32120 Brassica napus HOM05D000843 ORTHO05D000698 5.5e-12 76.3 160 38.1
BolC3t15553H Brassica oleracea HOM05D000843 ORTHO05D000698 5.5e-12 76.3 160 38.1
CSS0042368 Camellia sinensis var. sinensis HOM05D000843 ORTHO05D000698 7.2e-12 75.9 171 37.4
RcHm_v2.0_Chr5g0049961 Rosa chinensis HOM05D000843 ORTHO05D000698 9.4e-12 75.5 163 38.0
Cfa010264 Carpinus fangiana HOM05D000843 ORTHO05D000698 1.2e-11 75.1 160 36.2
BcaB01g03042 Brassica carinata HOM05D000843 ORTHO05D000698 1.6e-11 74.7 161 38.5
Phvul.006G011200 Phaseolus vulgaris HOM05D000843 ORTHO05D000698 2.1e-11 74.3 164 39.0
LjContig00564g0001972 Lotus japonicus HOM05D000843 ORTHO05D000698 2.7e-11 73.9 165 37.0
Sabra09G0124500 Salix brachista HOM05D000843 ORTHO05D000698 3.6e-11 73.6 174 34.5
FAN28G2364 Fragaria x ananassa HOM05D000843 ORTHO05D000698 4.7e-11 73.2 163 36.2
Glyma.14G041500 Glycine max HOM05D000843 ORTHO05D000698 6.1e-11 72.8 172 35.5
Hma1.2p1_0218F.1_g092710 Hydrangea macrophylla HOM05D000843 ORTHO05D000698 8.0e-11 72.4 168 36.3
Lalb_Chr10g0105921 Lupinus albus HOM05D000843 ORTHO05D000698 8.0e-11 72.4 169 36.1
Ca_06157_v3 Cicer arietinum L. HOM05D000843 ORTHO05D000698 1.4e-10 71.6 165 36.4
Ca_29849_v3 Cicer arietinum L. HOM05D000843 ORTHO05D000698 1.4e-10 71.6 165 36.4
TPR.G33784 Trifolium pratense HOM05D000843 ORTHO05D000698 1.4e-10 71.6 170 32.9
BcaB02g10251 Brassica carinata HOM05D020038 ORTHO05D032222 2.3e-10 70.9 81 46.9
Sopen01g004640 Solanum pennellii HOM05D000843 ORTHO05D000698 2.3e-10 70.9 163 34.4
PGSC0003DMG400008712 Solanum tuberosum HOM05D000843 ORTHO05D000698 3.0e-10 70.5 163 34.4
Glyma.13G076800 Glycine max HOM05D000843 ORTHO05D000698 5.2e-10 69.7 163 36.8
Dinv25741 Davidia involucrata HOM05D000843 ORTHO05D000698 6.8e-10 69.3 138 36.2
Actinidia22477 Actinidia chinensis HOM05D000843 ORTHO05D000698 8.8e-10 68.9 169 34.9
FvH4_1g28720 Fragaria vesca HOM05D000843 ORTHO05D000698 8.8e-10 68.9 156 36.5
FAN19G3072 Fragaria x ananassa HOM05D000843 ORTHO05D000698 8.8e-10 68.9 156 36.5
FAN23G1867 Fragaria x ananassa HOM05D000843 ORTHO05D000698 1.2e-09 68.6 163 34.4
Nitab4.5_0000428g0210 Nicotiana tabacum HOM05D000843 ORTHO05D000698 1.2e-09 68.6 140 36.4
Sabra04G0133800 Salix brachista HOM05D000843 ORTHO05D000698 1.2e-09 68.6 178 34.8
TPR.G22218 Trifolium pratense HOM05D000843 ORTHO05D000698 1.2e-09 68.6 163 33.1
Lalb_Chr04g0249691 Lupinus albus HOM05D000843 ORTHO05D000698 1.5e-09 68.2 176 35.8
Medtr5g087790 Medicago truncatula HOM05D000843 ORTHO05D000698 2.0e-09 67.8 164 38.4
Nitab4.5_0007649g0020 Nicotiana tabacum HOM05D000843 ORTHO05D000698 2.0e-09 67.8 140 35.7
FAN26G0335 Fragaria x ananassa HOM05D000843 ORTHO05D000698 2.6e-09 67.4 163 34.4
SalBow6G1804 Salvia bowleyana HOM05D000843 ORTHO05D000698 2.6e-09 67.4 162 34.6
Dinv10728 Davidia involucrata HOM05D000843 ORTHO05D000698 3.4e-09 67.0 164 34.8
Dinv10733 Davidia involucrata HOM05D000843 ORTHO05D000698 3.4e-09 67.0 164 34.8
Peaxi162Scf00342g00073 Petunia axillaris HOM05D000843 ORTHO05D000698 3.4e-09 67.0 161 32.9
Lalb_Chr17g0347541 Lupinus albus HOM05D000843 ORTHO05D000698 4.4e-09 66.6 167 37.1
Actinidia22476 Actinidia chinensis HOM05D000843 ORTHO05D000698 5.7e-09 66.2 168 33.3
arahy.Tifrunner.gnm1.ann1.S7XF8N Arachis hypogaea HOM05D000843 ORTHO05D000698 1.3e-08 65.1 163 35.0
MSTRG.18487 Avicennia marina HOM05D000843 ORTHO05D000698 1.3e-08 65.1 166 34.3
Oeu048808.1 Olea europaea HOM05D000843 ORTHO05D000698 1.3e-08 65.1 167 32.3
Solyc01g009170.4 Solanum lycopersicum HOM05D000843 ORTHO05D000698 1.3e-08 65.1 125 37.6
CAN.G65.222 Capsicum annuum HOM05D000843 ORTHO05D000698 2.8e-08 63.9 166 33.7
MSTRG.17663 Avicennia marina HOM05D000843 ORTHO05D000698 3.7e-08 63.5 174 31.0
Lj2C931T8 Lonicera japonica HOM05D000843 ORTHO05D000698 3.7e-08 63.5 161 37.3
Phvul.006G011300 Phaseolus vulgaris HOM05D000843 ORTHO05D000698 3.7e-08 63.5 165 34.5
CAN.G65.223 Capsicum annuum HOM05D000843 ORTHO05D000698 6.3e-08 62.8 157 31.2
Peaxi162Scf00526g00042 Petunia axillaris HOM05D000843 ORTHO05D000698 8.3e-08 62.4 166 33.1
Oeu022225.1 Olea europaea HOM05D000843 ORTHO05D000698 1.1e-07 62.0 165 33.3
arahy.Tifrunner.gnm1.ann1.J729H0 Arachis hypogaea HOM05D000843 ORTHO05D000698 3.1e-07 60.5 164 34.8
DCAR_018974 Daucus carota HOM05D000843 ORTHO05D000698 5.4e-07 59.7 164 32.9
Medtr3g078770 Medicago truncatula HOM05D000843 ORTHO05D000698 7.0e-07 59.3 164 31.7
Nitab4.5_0002184g0010 Nicotiana tabacum HOM05D000843 ORTHO05D000698 7.0e-07 59.3 165 32.7
Solyc06g073730.2 Solanum lycopersicum HOM05D000843 ORTHO05D000698 7.0e-07 59.3 160 33.1
Nitab4.5_0000271g0110 Nicotiana tabacum HOM05D000843 ORTHO05D000698 9.1e-07 58.9 93 39.8
Oeu026661.1 Olea europaea HOM05D000843 ORTHO05D000698 1.2e-06 58.5 163 33.7
TWI79G1590 Tripterygium wilfordii HOM05D000843 ORTHO05D000698 1.2e-06 58.5 164 26.8
Nn2g14615 Nelumbo nucifera HOM05D000843 ORTHO05D000698 1.6e-06 58.2 87 43.7
BcaC05g28287 Brassica carinata HOM05D004312 ORTHO05D005394 2.7e-06 57.4 56 58.9
Solyc06g073720.3 Solanum lycopersicum HOM05D000843 ORTHO05D000698 4.5e-06 56.6 166 30.7
Sopen06g030120 Solanum pennellii HOM05D000843 ORTHO05D000698 4.5e-06 56.6 166 30.7
Migut.D00719 Erythranthe guttata HOM05D000843 ORTHO05D000698 5.9e-06 56.2 157 28.0
Sopen06g030130 Solanum pennellii HOM05D000843 ORTHO05D000698 7.7e-06 55.8 86 40.7
PGSC0003DMG400005914 Solanum tuberosum HOM05D000843 ORTHO05D000698 7.7e-06 55.8 160 28.8


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