Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g28106 Brassica carinata HOM05D001468 ORTHO05D091030 1.6e-36 155.6 82 100.0
BcaB03g14391 Brassica carinata HOM05D001468 ORTHO05D001404 8.7e-14 80.1 43 90.7
C07p24000 Brassica napus HOM05D001468 ORTHO05D001404 8.7e-14 80.1 43 90.7
BolC7t42924H Brassica oleracea HOM05D001468 ORTHO05D001404 8.7e-14 80.1 43 90.7
BcaB08g34859 Brassica carinata HOM05D001468 ORTHO05D001404 1.9e-13 79.0 43 86.0
BraA07t29358Z Brassica rapa HOM05D001468 ORTHO05D001404 1.6e-12 75.9 43 86.0
A07p16310 Brassica napus HOM05D001468 ORTHO05D001404 2.1e-12 75.5 43 86.0
Sp3g32770 Schrenkiella parvula HOM05D001468 ORTHO05D001404 1.5e-10 69.3 43 76.7
BcaB03g16725 Brassica carinata HOM05D001468 ORTHO05D001404 3.4e-10 68.2 43 76.7
Thhalv10022522m.g Eutrema salsugineum HOM05D001468 ORTHO05D001404 6.5e-09 63.9 43 74.4
Carub.0003s3365 Capsella rubella HOM05D001468 ORTHO05D001404 8.4e-09 63.5 43 69.8
AT2G19390 Arabidopsis thaliana HOM05D001468 ORTHO05D001404 1.4e-08 62.8 43 67.4
AL3G48930 Arabidopsis lyrata HOM05D001468 ORTHO05D001404 3.2e-08 61.6 43 65.1
BcaC06g36569 Brassica carinata HOM05D001468 ORTHO05D001404 3.2e-08 61.6 43 69.8
A07p01370 Brassica napus HOM05D001468 ORTHO05D001404 1.2e-07 59.7 43 67.4
BraA07t27932Z Brassica rapa HOM05D001468 ORTHO05D001404 1.2e-07 59.7 43 67.4
C07p02830 Brassica napus HOM05D001468 ORTHO05D001404 1.6e-07 59.3 43 67.4
BolC7t40680H Brassica oleracea HOM05D001468 ORTHO05D001404 1.6e-07 59.3 43 67.4
THA.LOC104814635 Tarenaya hassleriana HOM05D001468 ORTHO05D001404 3.5e-07 58.2 43 67.4
Aa31LG2G20750 Aethionema arabicum HOM05D001468 ORTHO05D001404 4.6e-07 57.8 43 67.4
THA.LOC104820016 Tarenaya hassleriana HOM05D001468 ORTHO05D001404 3.0e-06 55.1 43 62.8


User provided reference genes

Program Settings