Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g28043 Brassica carinata HOM05D006121 ORTHO05D009559 3.1e-78 295.0 147 100.0
BcaC05g28468 Brassica carinata HOM05D006121 ORTHO05D009559 1.1e-67 260.0 155 85.2
BcaC08g42951 Brassica carinata HOM05D006121 ORTHO05D009559 2.7e-66 255.4 177 75.1
BcaC03g16486 Brassica carinata HOM05D006121 ORTHO05D009559 3.9e-65 251.5 155 83.2
BcaC09g49299 Brassica carinata HOM05D006121 ORTHO05D009559 7.6e-61 237.3 162 72.8
BcaC05g27793 Brassica carinata HOM05D006121 ORTHO05D009559 1.7e-60 236.1 177 69.5
BcaC01g06835 Brassica carinata HOM05D006121 ORTHO05D009559 2.2e-60 235.7 161 72.7
BcaC02g11248 Brassica carinata HOM05D006121 ORTHO05D009559 2.1e-58 229.2 157 72.0
BcaC01g02132 Brassica carinata HOM05D006121 ORTHO05D009559 3.0e-57 225.3 177 65.5
BcaC07g37147 Brassica carinata HOM05D006121 ORTHO05D009559 7.4e-56 220.7 177 62.7
BcaC05g27675 Brassica carinata HOM05D006121 ORTHO05D009559 1.7e-52 209.5 177 63.3
BcaC02g11960 Brassica carinata HOM05D006121 ORTHO05D009559 2.6e-48 195.7 162 63.6
BcaC04g20823 Brassica carinata HOM05D006121 ORTHO05D009559 1.7e-47 193.0 123 77.2
BcaC02g09767 Brassica carinata HOM05D006121 ORTHO05D009559 8.2e-47 190.7 105 87.6
BcaC09g49729 Brassica carinata HOM05D006121 ORTHO05D009559 2.2e-44 182.6 177 53.1
BcaC09g49745 Brassica carinata HOM05D006121 ORTHO05D009559 2.5e-43 179.1 177 53.1
BcaC03g15126 Brassica carinata HOM05D006121 ORTHO05D009559 3.2e-43 178.7 122 74.6
BcaC04g21502 Brassica carinata HOM05D006121 ORTHO05D009559 2.7e-42 175.6 177 51.4
BcaC08g42838 Brassica carinata HOM05D006121 ORTHO05D009559 7.0e-38 161.0 93 79.6
BcaC06g36167 Brassica carinata HOM05D006121 ORTHO05D009559 1.7e-36 156.4 145 55.9
BcaC08g43580 Brassica carinata HOM05D006121 ORTHO05D009559 6.5e-36 154.5 80 90.0
BcaC03g16521 Brassica carinata HOM05D006121 ORTHO05D009559 1.2e-34 150.2 110 60.9
BcaC09g50206 Brassica carinata HOM05D006121 ORTHO05D009559 1.8e-33 146.4 85 77.6
BcaC01g00176 Brassica carinata HOM05D006121 ORTHO05D009559 3.0e-33 145.6 82 81.7
BcaC03g15823 Brassica carinata HOM05D006121 ORTHO05D009559 9.7e-32 140.6 108 63.9
BcaC05g27433 Brassica carinata HOM05D006121 ORTHO05D009559 5.9e-29 131.3 110 53.6
BcaC07g37897 Brassica carinata HOM05D006121 ORTHO05D009559 1.0e-28 130.6 109 52.3
BcaC03g17371 Brassica carinata HOM05D006121 ORTHO05D009559 8.5e-28 127.5 109 52.3
BcaC06g36507 Brassica carinata HOM05D006121 ORTHO05D009559 8.5e-28 127.5 109 51.4
BcaC03g15130 Brassica carinata HOM05D006121 ORTHO05D009559 7.2e-27 124.4 126 46.0
BcaC04g23210 Brassica carinata HOM05D006121 ORTHO05D009559 1.2e-26 123.6 109 50.5
BcaC01g02238 Brassica carinata HOM05D006121 ORTHO05D009559 1.6e-26 123.2 109 51.4
BcaC04g20762 Brassica carinata HOM05D006121 ORTHO05D009559 4.7e-26 121.7 110 49.1
BolC3t20163H Brassica oleracea HOM05D006121 ORTHO05D009559 2.0e-24 116.3 115 59.1
BcaC03g16371 Brassica carinata HOM05D006121 ORTHO05D009559 2.4e-22 109.4 109 48.6
BcaC06g35841 Brassica carinata HOM05D006121 ORTHO05D009559 2.4e-22 109.4 110 58.2
BcaC07g37265 Brassica carinata HOM05D006121 ORTHO05D009559 2.4e-22 109.4 110 56.4
BolC9t56759H Brassica oleracea HOM05D006121 ORTHO05D009559 3.1e-22 109.0 80 55.0
BraA06t25079Z Brassica rapa HOM05D006121 ORTHO05D009559 5.4e-22 108.2 100 45.0
Carub.0003s2904 Capsella rubella HOM05D006121 ORTHO05D009559 7.0e-22 107.8 138 37.7
BcaC03g16668 Brassica carinata HOM05D006121 ORTHO05D009559 9.1e-22 107.5 87 60.9
BcaC03g16227 Brassica carinata HOM05D006121 ORTHO05D009559 3.5e-21 105.5 92 52.2
BolC7t41498H Brassica oleracea HOM05D006121 ORTHO05D009559 2.9e-20 102.4 144 39.6
BraA09t38607Z Brassica rapa HOM05D006121 ORTHO05D009559 8.6e-20 100.9 111 43.2
BcaC04g23066 Brassica carinata HOM05D006121 ORTHO05D009559 4.2e-19 98.6 87 49.4
BcaC04g20594 Brassica carinata HOM05D006121 ORTHO05D009559 9.5e-19 97.4 123 42.3
BcaC01g05819 Brassica carinata HOM05D006121 ORTHO05D009559 1.8e-17 93.2 109 41.3
BcaC07g37903 Brassica carinata HOM05D006121 ORTHO05D009559 3.7e-15 85.5 90 46.7
C05p29190 Brassica napus HOM05D006121 ORTHO05D009559 5.4e-14 81.6 50 70.0
AT1G51172 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 2.9e-12 75.9 89 38.2
AT4G03830 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 1.1e-11 73.9 94 34.0
BcaC02g10718 Brassica carinata HOM05D006121 ORTHO05D009559 1.1e-11 73.9 93 46.2
BolC9t58013H Brassica oleracea HOM05D006121 ORTHO05D009559 1.1e-11 73.9 145 32.4
AL2G23320 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 5.6e-11 71.6 108 34.3
BcaB04g17962 Brassica carinata HOM05D006121 ORTHO05D009559 3.6e-10 68.9 89 37.1
AL1G50390 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 4.7e-10 68.6 94 36.2
Carub.0002s0942 Capsella rubella HOM05D009492 ORTHO05D011693 2.6e-08 62.8 112 31.2
Carub.0006s2663 Capsella rubella HOM05D009492 ORTHO05D011693 4.4e-08 62.0 102 30.4
Carub.0001s3399 Capsella rubella HOM05D008386 ORTHO05D010572 5.8e-08 61.6 109 34.9
Carub.0007s3731 Capsella rubella HOM05D009492 ORTHO05D011693 5.8e-08 61.6 112 30.4
BcaC03g16745 Brassica carinata HOM05D006121 ORTHO05D009559 7.5e-08 61.2 39 74.4
BolC3t19110H Brassica oleracea HOM05D006121 ORTHO05D043263 7.5e-08 61.2 46 63.0
Carub.0002s0975 Capsella rubella HOM05D009492 ORTHO05D011693 2.2e-07 59.7 99 33.3
Carub.0006s2644 Capsella rubella HOM05D009492 ORTHO05D011693 2.9e-07 59.3 99 32.3
Carub.0005s0956 Capsella rubella HOM05D009492 ORTHO05D011693 3.7e-07 58.9 99 33.3
Carub.0008s0728 Capsella rubella HOM05D009492 ORTHO05D011693 3.7e-07 58.9 97 34.0
BcaC08g43697 Brassica carinata HOM05D006121 ORTHO05D009559 8.3e-07 57.8 35 77.1
Carub.0007s3611 Capsella rubella HOM05D009492 ORTHO05D011693 8.3e-07 57.8 99 32.3
BcaC04g22048 Brassica carinata HOM05D006121 ORTHO05D009559 1.4e-06 57.0 81 44.4
Carub.0003s2742 Capsella rubella HOM05D009492 ORTHO05D011693 1.9e-06 56.6 99 31.3
CARHR174650 Cardamine hirsuta HOM05D008458 ORTHO05D010628 1.9e-06 56.6 99 31.3
Carub.0002s1048 Capsella rubella HOM05D009492 ORTHO05D011693 4.1e-06 55.5 93 30.1
Carub.0002s0916 Capsella rubella HOM05D009492 ORTHO05D011693 5.4e-06 55.1 99 32.3
AL4G17450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 7.0e-06 54.7 128 32.0


User provided reference genes

Program Settings