Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g27930 Brassica carinata HOM05D005120 ORTHO05D006174 5.1e-277 957.2 514 100.0
BraA05t21413Z Brassica rapa HOM05D005120 ORTHO05D006174 1.2e-270 936.0 514 97.3
C05p39360 Brassica napus HOM05D005120 ORTHO05D006174 6.6e-269 930.2 500 99.8
BolC5t32672H Brassica oleracea HOM05D005120 ORTHO05D006174 6.6e-269 930.2 500 99.8
A05p25290 Brassica napus HOM05D005120 ORTHO05D006174 1.2e-262 909.4 500 97.2
BcaB03g13768 Brassica carinata HOM05D005120 ORTHO05D006174 2.8e-259 898.3 502 95.4
Sp1g27750 Schrenkiella parvula HOM05D005120 ORTHO05D006174 1.8e-253 879.0 514 91.8
BcaC05g27233 Brassica carinata HOM05D005120 ORTHO05D006174 7.6e-249 863.6 515 90.3
C05p31470 Brassica napus HOM05D005120 ORTHO05D006174 9.9e-249 863.2 515 90.3
BraA09t38958Z Brassica rapa HOM05D005120 ORTHO05D006174 8.4e-248 860.1 515 89.9
Thhalv10007389m.g Eutrema salsugineum HOM05D005120 ORTHO05D006174 3.2e-247 858.2 514 90.1
CARHR031430 Cardamine hirsuta HOM05D005120 ORTHO05D006174 7.1e-247 857.1 514 89.9
Carub.0001s3040 Capsella rubella HOM05D005120 ORTHO05D006174 3.5e-246 854.7 515 89.5
AT1G32080 Arabidopsis thaliana HOM05D005120 ORTHO05D006174 4.6e-246 854.4 515 90.7
BolC5t31871H Brassica oleracea HOM05D005120 ORTHO05D006174 6.0e-246 854.0 508 90.6
AL1G46150 Arabidopsis lyrata HOM05D005120 ORTHO05D006174 3.3e-244 848.2 515 90.3
BcaB07g32869 Brassica carinata HOM05D005120 ORTHO05D006174 3.1e-242 841.6 514 88.9
A09p34100 Brassica napus HOM05D005120 ORTHO05D006174 5.0e-232 807.7 487 88.9
THA.LOC104798500 Tarenaya hassleriana HOM05D005120 ORTHO05D006174 9.4e-231 803.5 520 83.3
Aa31LG2G13920 Aethionema arabicum HOM05D005120 ORTHO05D006174 4.3e-228 794.7 516 83.5
Cfa012552 Carpinus fangiana HOM05D005120 ORTHO05D006174 1.5e-204 716.5 460 82.2
CANSAT21G0750 Cannabis sativa HOM05D005120 ORTHO05D006174 3.4e-204 715.3 457 82.3
CiPaw.11G101100 Carya illinoinensis HOM05D005120 ORTHO05D006174 4.4e-204 714.9 463 81.2
Aa31LG2G11060 Aethionema arabicum HOM05D005120 ORTHO05D006174 5.3e-202 708.0 443 84.7
Prupe.5G024500 Prunus persica HOM05D005120 ORTHO05D006174 5.3e-202 708.0 496 77.6
Cpa.g.sc757.1 Carica papaya HOM05D005120 ORTHO05D006174 2.7e-201 705.7 531 73.6
Duzib205G1724 Durio zibethinus HOM05D005120 ORTHO05D006174 3.5e-201 705.3 461 80.5
Manes.17G006500 Manihot esculenta HOM05D005120 ORTHO05D006174 4.5e-201 704.9 518 74.5
Eucgr.E01259 Eucalyptus grandis HOM05D005120 ORTHO05D006174 7.7e-201 704.1 510 74.3
Thecc.03G314000 Theobroma cacao HOM05D005120 ORTHO05D006174 1.7e-200 703.0 461 80.3
Potri.003G099600 Populus trichocarpa HOM05D005120 ORTHO05D006174 2.2e-200 702.6 459 80.8
PGR042G0860 Punica granatum HOM05D005120 ORTHO05D006174 1.1e-199 700.3 523 74.8
Gorai.003G186700 Gossypium raimondii HOM05D005120 ORTHO05D006174 5.5e-199 698.0 516 73.1
Sabra03G0067700 Salix brachista HOM05D005120 ORTHO05D006174 5.5e-199 698.0 458 81.0
Solyc08g076290.3 Solanum lycopersicum HOM05D005120 ORTHO05D006174 5.5e-199 698.0 453 80.1
Sopen08g024900 Solanum pennellii HOM05D005120 ORTHO05D006174 5.5e-199 698.0 453 80.1
Gohir.D03G177466 Gossypium hirsutum HOM05D005120 ORTHO05D006174 1.6e-198 696.4 516 72.9
Gohir.A03G000018 Gossypium hirsutum HOM05D005120 ORTHO05D006174 2.7e-198 695.7 462 79.2
MD06G1023600 Malus domestica HOM05D005120 ORTHO05D006174 2.7e-198 695.7 457 80.5
Nitab4.5_0000543g0120 Nicotiana tabacum HOM05D005120 ORTHO05D006174 4.7e-198 694.9 454 80.4
QL12p000342 Quercus lobata HOM05D005120 ORTHO05D006174 8.0e-198 694.1 451 81.4
Lj4g0011317 Lotus japonicus HOM05D005120 ORTHO05D006174 1.8e-197 693.0 457 79.4
PGSC0003DMG402009291 Solanum tuberosum HOM05D005120 ORTHO05D006174 4.0e-197 691.8 435 83.0
TWI60G0565 Tripterygium wilfordii HOM05D005120 ORTHO05D006174 2.6e-196 689.1 489 75.5
Haze_08107 Corylus avellana HOM05D005120 ORTHO05D006174 9.8e-196 687.2 514 73.5
COL.COLO4_16896 Corchorus olitorius HOM05D005120 ORTHO05D006174 1.7e-195 686.4 454 78.9
RcHm_v2.0_Chr7g0212851 Rosa chinensis HOM05D005120 ORTHO05D006174 1.7e-195 686.4 456 79.6
FAN18G2593 Fragaria x ananassa HOM05D005120 ORTHO05D006174 8.3e-195 684.1 456 78.9
FAN18G1216 Fragaria x ananassa HOM05D005120 ORTHO05D006174 1.8e-194 682.9 456 78.7
FAN08G2640 Fragaria x ananassa HOM05D005120 ORTHO05D006174 2.4e-194 682.6 498 73.5
FvH4_5g23540 Fragaria vesca HOM05D005120 ORTHO05D006174 4.1e-194 681.8 456 78.5
Atru.chr6.1569 Acer truncatum HOM05D005120 ORTHO05D006174 5.4e-194 681.4 456 78.5
Medtr8g070830 Medicago truncatula HOM05D005120 ORTHO05D006174 7.0e-194 681.0 457 77.7
Psat4g111760 Pisum sativum HOM05D005120 ORTHO05D006174 9.1e-194 680.6 457 78.3
FAN04G0205 Fragaria x ananassa HOM05D005120 ORTHO05D006174 1.6e-193 679.9 482 75.7
Nitab4.5_0006395g0010 Nicotiana tabacum HOM05D005120 ORTHO05D006174 2.0e-193 679.5 421 83.6
Lalb_Chr16g0391911 Lupinus albus HOM05D005120 ORTHO05D006174 2.7e-193 679.1 443 80.4
Cc08_g03980 Coffea canephora HOM05D005120 ORTHO05D006174 5.0e-192 674.9 531 70.8
Peaxi162Scf00408g00023 Petunia axillaris HOM05D005120 ORTHO05D006174 1.5e-191 673.3 413 84.5
Migut.A00586 Erythranthe guttata HOM05D005120 ORTHO05D006174 7.2e-191 671.0 505 71.7
TAR374G0846 Trochodendron aralioides HOM05D005120 ORTHO05D006174 7.2e-191 671.0 460 77.4
arahy.Tifrunner.gnm1.ann1.H9FFKJ Arachis hypogaea HOM05D005120 ORTHO05D006174 1.6e-190 669.8 519 71.5
SGA_v2.0_scaffold42G16013 Striga asiatica HOM05D005120 ORTHO05D006174 1.6e-190 669.8 515 70.7
MELO3C026723.2 Cucumis melo HOM05D005120 ORTHO05D006174 4.7e-190 668.3 514 70.0
Rhsim11G0027600 Rhododendron simsii HOM05D005120 ORTHO05D006174 4.7e-190 668.3 546 67.9
VMungo0251G1066 Vigna mungo HOM05D005120 ORTHO05D006174 6.1e-190 667.9 436 79.4
Ah.07g201110 Amaranthus hybridus HOM05D005120 ORTHO05D006174 1.0e-189 667.2 464 75.4
CsaV3_3G030430 Cucumis sativus L. HOM05D005120 ORTHO05D006174 1.0e-189 667.2 516 69.8
TPR.G6179 Trifolium pratense HOM05D005120 ORTHO05D006174 1.0e-189 667.2 553 68.9
Lsat_1_v5_gn_6_17781 Lactuca sativa HOM05D005120 ORTHO05D006174 1.4e-189 666.8 458 77.5
Glyma.16G095100 Glycine max HOM05D005120 ORTHO05D006174 2.3e-189 666.0 434 80.2
ClCG07G002270 Citrullus lanatus HOM05D005120 ORTHO05D006174 3.0e-189 665.6 531 69.1
Dinv29029 Davidia involucrata HOM05D005120 ORTHO05D006174 4.0e-189 665.2 431 81.2
Nn1g01918 Nelumbo nucifera HOM05D005120 ORTHO05D006174 6.8e-189 664.5 472 75.6
GSVIVG01029984001 Vitis vinifera HOM05D005120 ORTHO05D006174 6.8e-189 664.5 452 77.4
Phvul.003G274000 Phaseolus vulgaris HOM05D005120 ORTHO05D006174 8.9e-189 664.1 438 78.8
Sed0007636 Sechium edule HOM05D005120 ORTHO05D006174 1.5e-188 663.3 511 71.2
Oeu042231.1 Olea europaea HOM05D005120 ORTHO05D006174 3.4e-188 662.1 476 73.7
AUR62018612 Chenopodium quinoa HOM05D005120 ORTHO05D006174 4.4e-188 661.8 506 72.1
MSTRG.11896 Avicennia marina HOM05D005120 ORTHO05D006174 1.3e-187 660.2 524 67.4
CAN.G773.16 Capsicum annuum HOM05D005120 ORTHO05D006174 1.7e-187 659.8 415 82.9
SalBow1G1967 Salvia bowleyana HOM05D005120 ORTHO05D006174 2.8e-187 659.1 457 76.4
Hund14388 Selenicereus undatus HOM05D005120 ORTHO05D006174 2.8e-187 659.1 533 68.5
Sc07g0008440 Simmondsia chinensis HOM05D005120 ORTHO05D006174 4.9e-187 658.3 454 75.6
HanXRQChr02g0050021 Helianthus annuus HOM05D005120 ORTHO05D006174 1.1e-186 657.1 460 75.4
Aqoxy7G00879 Aquilegia oxysepala HOM05D005120 ORTHO05D006174 2.4e-186 656.0 458 77.5
arahy.Tifrunner.gnm1.ann1.PMQ83Q Arachis hypogaea HOM05D005120 ORTHO05D006174 2.0e-185 652.9 515 69.7
Sed0003941 Sechium edule HOM05D005120 ORTHO05D006174 7.8e-185 651.0 530 68.1
AUR62007376 Chenopodium quinoa HOM05D005120 ORTHO05D006174 2.9e-184 649.0 404 83.7
Lj8A318T44 Lonicera japonica HOM05D005120 ORTHO05D006174 2.5e-183 646.0 458 74.2
vmacro00236 Vaccinium macrocarpon HOM05D005120 ORTHO05D006174 5.6e-183 644.8 456 75.2
EL10Ac5g11981 Beta vulgaris HOM05D005120 ORTHO05D006174 1.6e-182 643.3 520 69.4
SGA_v2.0_scaffold89G27426 Striga asiatica HOM05D005120 ORTHO05D006174 3.6e-182 642.1 428 78.7
Ca_22546_v3 Cicer arietinum L. HOM05D005120 ORTHO05D006174 6.1e-182 641.3 406 81.8
MBI04_g36023_MAGBIO Magnolia biondii HOM05D005120 ORTHO05D006174 5.2e-181 638.3 484 71.7
Os01g0511600 Oryza sativa ssp. japonica HOM05D005120 ORTHO05D006174 6.4e-179 631.3 433 75.8
Actinidia27272 Actinidia chinensis HOM05D005120 ORTHO05D006174 8.3e-179 630.9 444 74.3
Glyma.01G009900 Glycine max HOM05D005120 ORTHO05D006174 1.4e-178 630.2 441 74.6
CDE06G0533 Ceratophyllum demersum HOM05D005120 ORTHO05D006174 1.9e-178 629.8 524 67.2
PSO717G0011 Papaver somniferum HOM05D005120 ORTHO05D006174 1.7e-176 623.2 528 68.2
Glyma.09G211200 Glycine max HOM05D005120 ORTHO05D006174 3.9e-176 622.1 458 72.9
ECA233G2235 Erigeron canadensis HOM05D005120 ORTHO05D006174 5.0e-176 621.7 442 75.6
Phvul.002G132800 Phaseolus vulgaris HOM05D005120 ORTHO05D006174 9.5e-175 617.5 428 75.5
Zm00001eb025160 Zea mays HOM05D005120 ORTHO05D006174 2.8e-174 615.9 440 73.6
Nn3g19343 Nelumbo nucifera HOM05D005120 ORTHO05D006174 4.7e-174 615.1 484 69.0
PSO675G2578 Papaver somniferum HOM05D005120 ORTHO05D006174 3.1e-173 612.5 526 66.7
ATR0829G037 Amborella trichopoda HOM05D005120 ORTHO05D006174 6.8e-173 611.3 435 74.0
Hund11160 Selenicereus undatus HOM05D005120 ORTHO05D006174 7.5e-172 607.8 438 74.7
Atru.chr6.1566 Acer truncatum HOM05D005120 ORTHO05D006174 1.2e-164 583.9 459 71.0
Lalb_Chr16g0380871 Lupinus albus HOM05D005120 ORTHO05D006174 1.2e-164 583.9 416 70.9
DCAR_004262 Daucus carota HOM05D005120 ORTHO05D006174 3.4e-164 582.4 443 70.7
unitig_747.g21935 Utricularia gibba HOM05D005120 ORTHO05D006174 4.1e-162 575.5 470 66.4
CSS0018999 Camellia sinensis var. sinensis HOM05D005120 ORTHO05D006174 2.8e-158 562.8 421 73.2
arahy.Tifrunner.gnm1.ann1.1W9K9Y Arachis hypogaea HOM05D005120 ORTHO05D006174 2.1e-153 546.6 456 65.4
arahy.Tifrunner.gnm1.ann1.5B6WJ4 Arachis hypogaea HOM05D005120 ORTHO05D006174 2.1e-153 546.6 456 65.4
AagrBONN_evm.TU.Sc2ySwM_117.3701 Anthoceros agrestis HOM05D005120 ORTHO05D006174 3.1e-141 506.1 417 62.6
Pp3c1_16500 Physcomitrium patens HOM05D005120 ORTHO05D006174 1.5e-140 503.8 486 57.6
Mapoly0008s0007 Marchantia polymorpha HOM05D005120 ORTHO05D006174 8.1e-134 481.5 440 59.3
Actinidia01339 Actinidia chinensis HOM05D005120 ORTHO05D006174 2.5e-130 469.9 376 70.5
Ciclev10003461m.g Citrus clementina HOM05D005120 ORTHO05D006174 1.6e-126 457.2 375 66.9
SMO347G0341 Selaginella moellendorffii HOM05D005120 ORTHO05D006174 4.8e-118 429.1 367 61.0
Dinv06901 Davidia involucrata HOM05D005120 ORTHO05D006174 9.0e-117 424.9 315 70.5
Atru.chr6.1568 Acer truncatum HOM05D005120 ORTHO05D006174 5.5e-106 389.0 228 91.2
PRCOL_00000663 Prasinoderma coloniale HOM05D005120 ORTHO05D006174 5.2e-96 355.9 415 48.9
Atru.chr6.1567 Acer truncatum HOM05D005120 ORTHO05D006174 9.8e-87 325.1 230 70.9
Lalb_Chr16g0380881 Lupinus albus HOM05D005120 ORTHO05D006174 1.8e-85 320.9 425 46.4
FAN13G2921 Fragaria x ananassa HOM05D005120 ORTHO05D006174 2.7e-81 307.0 329 55.3
Cre09.g394850 Chlamydomonas reinhardtii HOM05D005120 ORTHO05D006174 6.6e-75 285.8 437 39.6
SMO367G1009 Selaginella moellendorffii HOM05D005120 ORTHO05D006174 1.2e-71 275.0 386 38.9
Glyma.08G265967 Glycine max HOM05D005120 ORTHO05D006174 3.2e-69 266.9 236 68.6
CANSAT64G2484 Cannabis sativa HOM05D005120 ORTHO05D006174 3.5e-68 263.5 156 91.0
Zm00001eb025140 Zea mays HOM05D005120 ORTHO05D006174 8.6e-67 258.8 219 63.0
Pp3c4_7680 Physcomitrium patens HOM05D005120 ORTHO05D006174 1.5e-63 248.1 395 35.7
AagrBONN_evm.TU.Sc2ySwM_368.2516 Anthoceros agrestis HOM05D005120 ORTHO05D006174 3.0e-59 233.8 400 35.5
PRCOL_00006607 Prasinoderma coloniale HOM05D005120 ORTHO05D006174 8.9e-56 222.2 453 36.9
CBR_g23155 Chara braunii HOM05D005120 ORTHO05D006174 1.2e-52 211.8 162 69.1
arahy.Tifrunner.gnm1.ann1.B01XES Arachis hypogaea HOM05D005120 ORTHO05D006174 5.6e-50 203.0 247 47.4
PGR044G1750 Punica granatum HOM05D005120 ORTHO05D006174 5.2e-40 169.9 144 66.7
SEGI_09610 Sequoiadendron giganteum HOM05D005120 ORTHO05D006174 1.4e-37 161.8 136 60.3
CARHR291910 Cardamine hirsuta HOM05D005120 ORTHO05D006174 6.4e-30 136.3 86 79.1
SEGI_28661 Sequoiadendron giganteum HOM05D005120 ORTHO05D006174 3.5e-28 130.6 123 56.9
CBR_g23153 Chara braunii HOM05D005120 ORTHO05D006174 1.6e-25 121.7 122 54.9
VMungo0647G0996 Vigna mungo HOM05D005120 ORTHO05D006174 5.8e-23 113.2 97 68.0
Oeu023967.3 Olea europaea HOM05D005120 ORTHO05D006174 1.3e-19 102.1 84 65.5
MCO13G610 Micromonas commoda HOM05D005120 ORTHO05D006174 1.8e-19 101.7 386 26.2
PRCOL_00001036 Prasinoderma coloniale HOM05D001145 ORTHO05D014381 4.2e-13 80.5 423 26.2
PRCOL_00005007 Prasinoderma coloniale HOM05D013059 ORTHO05D014381 5.1e-11 73.6 221 28.1
CDE03G0049 Ceratophyllum demersum HOM05D005120 ORTHO05D006174 3.7e-09 67.4 67 59.7


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