Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g27887 Brassica carinata HOM05D003835 ORTHO05D004930 1.6e-177 625.9 310 100.0
BcaC05g27575 Brassica carinata HOM05D003835 ORTHO05D004930 2.6e-127 459.1 338 74.0
BcaC06g36022 Brassica carinata HOM05D003835 ORTHO05D004930 6.4e-126 454.5 336 72.6
BcaC01g02168 Brassica carinata HOM05D003835 ORTHO05D004930 6.2e-121 438.0 327 69.7
BcaC02g10732 Brassica carinata HOM05D003835 ORTHO05D004930 3.9e-107 392.1 336 63.4
BcaC02g10813 Brassica carinata HOM05D003835 ORTHO05D004930 5.1e-99 365.2 334 62.9
BcaC04g20991 Brassica carinata HOM05D003835 ORTHO05D004930 8.7e-99 364.4 335 61.8
BolC8t47946H Brassica oleracea HOM05D003835 ORTHO05D004930 1.9e-98 363.2 287 70.0
BcaC03g16445 Brassica carinata HOM05D003835 ORTHO05D004930 5.7e-98 361.7 329 61.7
BcaC04g20623 Brassica carinata HOM05D003835 ORTHO05D004930 2.5e-93 346.3 335 59.1
BcaC09g49645 Brassica carinata HOM05D003835 ORTHO05D004930 5.5e-93 345.1 275 65.8
BcaC07g37247 Brassica carinata HOM05D003835 ORTHO05D004930 3.7e-89 332.4 265 68.3
BcaC01g02043 Brassica carinata HOM05D003835 ORTHO05D004930 5.3e-88 328.6 255 66.7
BcaC04g20851 Brassica carinata HOM05D003835 ORTHO05D004930 5.0e-86 322.0 278 63.7
BcaC04g20891 Brassica carinata HOM05D003835 ORTHO05D004930 1.6e-84 317.0 335 56.1
BcaNung05987 Brassica carinata HOM05D003835 ORTHO05D004930 1.0e-83 314.3 248 69.4
BcaC05g27703 Brassica carinata HOM05D003835 ORTHO05D004930 6.7e-83 311.6 269 62.8
BcaC02g10604 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-82 310.5 277 62.8
BolC8t47793H Brassica oleracea HOM05D003835 ORTHO05D004930 1.5e-82 310.5 256 66.4
BcaC06g36790 Brassica carinata HOM05D003835 ORTHO05D004930 2.0e-82 310.1 234 72.2
BcaC04g20857 Brassica carinata HOM05D003835 ORTHO05D004930 2.8e-81 306.2 336 54.8
BcaC09g49698 Brassica carinata HOM05D003835 ORTHO05D004930 5.3e-80 302.0 315 51.4
BcaC04g20985 Brassica carinata HOM05D003835 ORTHO05D004930 2.6e-79 299.7 330 53.3
BcaC03g16671 Brassica carinata HOM05D003835 ORTHO05D004930 2.0e-74 283.5 317 50.5
BcaC04g20843 Brassica carinata HOM05D003835 ORTHO05D004930 5.9e-71 271.9 357 49.6
BcaB01g01376 Brassica carinata HOM05D003835 ORTHO05D004930 1.6e-68 263.8 321 47.0
BcaC03g17353 Brassica carinata HOM05D003835 ORTHO05D004930 4.4e-66 255.8 313 47.0
BcaC01g02153 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-65 253.8 323 45.2
BcaC06g36461 Brassica carinata HOM05D003835 ORTHO05D004930 3.5e-63 246.1 274 49.3
BcaC03g16196 Brassica carinata HOM05D003835 ORTHO05D004930 7.7e-63 245.0 287 46.7
BcaC04g20890 Brassica carinata HOM05D003835 ORTHO05D014092 1.1e-61 241.1 147 84.4
BcaC05g27589 Brassica carinata HOM05D003835 ORTHO05D004930 2.5e-61 240.0 327 43.7
BcaB06g26909 Brassica carinata HOM05D003835 ORTHO05D004930 5.5e-61 238.8 315 42.5
BcaC01g01952 Brassica carinata HOM05D003835 ORTHO05D004930 8.0e-60 235.0 311 43.1
BcaC06g35829 Brassica carinata HOM05D003835 ORTHO05D004930 2.3e-59 233.4 183 68.9
BcaC07g37476 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-57 227.3 132 81.8
BcaC06g35964 Brassica carinata HOM05D003835 ORTHO05D004930 2.8e-57 226.5 311 44.1
BolC6t36351H Brassica oleracea HOM05D003835 ORTHO05D014092 1.1e-56 224.6 241 57.7
BcaC03g16231 Brassica carinata HOM05D003835 ORTHO05D014092 7.3e-53 211.8 134 82.1
BcaB01g01339 Brassica carinata HOM05D003835 ORTHO05D004930 2.8e-52 209.9 272 44.5
BraA05t21182Z Brassica rapa HOM05D003835 ORTHO05D004930 3.6e-52 209.5 310 42.9
BraA05t21049Z Brassica rapa HOM05D003835 ORTHO05D014092 6.1e-52 208.8 145 74.5
BcaC07g37567 Brassica carinata HOM05D003835 ORTHO05D014092 1.0e-51 208.0 141 75.9
BcaC04g20889 Brassica carinata HOM05D003835 ORTHO05D004930 6.4e-49 198.7 108 87.0
BolC4t24052H Brassica oleracea HOM05D003835 ORTHO05D004930 6.4e-49 198.7 114 84.2
BcaC06g35918 Brassica carinata HOM05D003835 ORTHO05D004930 8.3e-49 198.4 229 52.4
BcaC06g35991 Brassica carinata HOM05D003835 ORTHO05D014092 2.0e-47 193.7 153 67.3
BraA01t02821Z Brassica rapa HOM05D003835 ORTHO05D004930 2.7e-47 193.4 210 53.3
BolC8t47786H Brassica oleracea HOM05D003835 ORTHO05D014092 4.6e-47 192.6 156 66.7
BcaC09g49552 Brassica carinata HOM05D003835 ORTHO05D004930 7.8e-47 191.8 101 89.1
BcaC02g10560 Brassica carinata HOM05D003835 ORTHO05D004930 1.3e-46 191.0 287 41.5
BcaC03g16677 Brassica carinata HOM05D003835 ORTHO05D004930 3.0e-46 189.9 111 81.1
BcaB07g33106 Brassica carinata HOM05D003835 ORTHO05D004930 6.6e-46 188.7 130 64.6
BcaC01g02337 Brassica carinata HOM05D003835 ORTHO05D014092 1.1e-45 188.0 128 73.4
BcaC09g49753 Brassica carinata HOM05D003835 ORTHO05D004930 1.9e-45 187.2 108 82.4
BcaC05g27891 Brassica carinata HOM05D003835 ORTHO05D004930 2.5e-45 186.8 94 95.7
BcaC08g43746 Brassica carinata HOM05D003835 ORTHO05D004930 4.3e-45 186.0 108 79.6
BcaC05g27888 Brassica carinata HOM05D003835 ORTHO05D004930 3.6e-44 183.0 106 89.6
C05p36390 Brassica napus HOM05D003835 ORTHO05D014092 3.6e-44 183.0 155 63.9
BcaC04g20842 Brassica carinata HOM05D003835 ORTHO05D004930 4.0e-43 179.5 246 45.5
BcaB01g01100 Brassica carinata HOM05D003835 ORTHO05D004930 8.3e-41 171.8 243 43.2
BcaC07g37472 Brassica carinata HOM05D003835 ORTHO05D014092 8.3e-41 171.8 116 75.0
BcaC02g10387 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-40 171.4 161 59.6
BcaB05g23138 Brassica carinata HOM05D003835 ORTHO05D004930 2.4e-40 170.2 263 41.8
BcaC04g20888 Brassica carinata HOM05D003835 ORTHO05D004930 7.8e-39 165.2 113 77.9
BcaC09g49664 Brassica carinata HOM05D003835 ORTHO05D004930 8.6e-38 161.8 105 76.2
BcaC04g20805 Brassica carinata HOM05D003835 ORTHO05D004930 2.5e-37 160.2 105 74.3
BcaC05g28695 Brassica carinata HOM05D003835 ORTHO05D004930 1.6e-36 157.5 279 39.4
BcaC09g49670 Brassica carinata HOM05D003835 ORTHO05D004930 3.6e-36 156.4 94 88.3
BcaC05g27889 Brassica carinata HOM05D003835 ORTHO05D014092 8.9e-35 151.8 103 79.6
BraA09t39004Z Brassica rapa HOM05D003835 ORTHO05D014092 1.7e-33 147.5 113 64.6
BcaC03g16229 Brassica carinata HOM05D003835 ORTHO05D014092 3.7e-33 146.4 101 71.3
BcaC02g10775 Brassica carinata HOM05D003835 ORTHO05D004930 7.8e-31 138.7 85 85.9
BcaC06g35990 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-30 137.5 77 84.4
BcaC01g02336 Brassica carinata HOM05D003835 ORTHO05D004930 9.5e-29 131.7 74 85.1
BraA08t32792Z Brassica rapa HOM05D003835 ORTHO05D004930 4.0e-27 126.3 276 33.7
BolC8t50199H Brassica oleracea HOM05D003835 ORTHO05D004930 4.4e-26 122.9 126 52.4
BcaC07g37248 Brassica carinata HOM05D003835 ORTHO05D004930 5.8e-26 122.5 70 81.4
BolC1t03343H Brassica oleracea HOM05D003835 ORTHO05D004930 1.7e-22 110.9 164 40.9
BcaC07g39533 Brassica carinata HOM05D003835 ORTHO05D004930 2.3e-22 110.5 78 66.7
BcaC09g49671 Brassica carinata HOM05D003835 ORTHO05D014092 1.9e-21 107.5 56 91.1
BolC3t19175H Brassica oleracea HOM05D003835 ORTHO05D004930 3.3e-21 106.7 126 43.7
BcaB06g26790 Brassica carinata HOM05D003835 ORTHO05D004930 4.3e-21 106.3 140 41.4
BcaC07g37594 Brassica carinata HOM05D003835 ORTHO05D014092 4.3e-21 106.3 56 87.5
BcaB01g01286 Brassica carinata HOM05D003835 ORTHO05D004930 5.6e-21 105.9 79 65.8
BcaB05g23456 Brassica carinata HOM05D003835 ORTHO05D004930 9.6e-21 105.1 67 68.7
BcaC03g16557 Brassica carinata HOM05D007458 ORTHO05D009533 9.6e-21 105.1 128 39.8
BcaB08g35159 Brassica carinata HOM05D003835 ORTHO05D004930 1.2e-20 104.8 117 42.7
BcaC03g16198 Brassica carinata HOM05D003835 ORTHO05D004930 1.6e-20 104.4 123 43.9
BcaC09g48282 Brassica carinata HOM05D003835 ORTHO05D004930 2.8e-20 103.6 59 72.9
BcaC01g02367 Brassica carinata HOM05D003835 ORTHO05D094248 1.8e-19 100.9 56 82.1
BcaC03g16751 Brassica carinata HOM05D003835 ORTHO05D004930 2.6e-18 97.1 118 42.4
Carub.0008s0643 Capsella rubella HOM05D003835 ORTHO05D004930 1.3e-17 94.7 125 39.2
BcaC06g35836 Brassica carinata HOM05D003835 ORTHO05D004930 3.8e-17 93.2 92 52.2
BcaC07g37593 Brassica carinata HOM05D003835 ORTHO05D004930 6.4e-17 92.4 50 88.0
BcaC03g16533 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-16 91.7 64 71.9
AL4G20670 Arabidopsis lyrata HOM05D003835 ORTHO05D004930 1.4e-16 91.3 119 37.8
BcaC07g37517 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-16 91.3 62 67.7
BcaB05g23025 Brassica carinata HOM05D003835 ORTHO05D004930 3.2e-16 90.1 67 58.2
BcaC03g16676 Brassica carinata HOM05D003835 ORTHO05D004930 4.2e-16 89.7 91 54.9
BolC3t19042H Brassica oleracea HOM05D003835 ORTHO05D004930 4.2e-16 89.7 70 74.3
BolC2t11376H Brassica oleracea HOM05D003835 ORTHO05D004930 5.4e-16 89.4 118 39.8
BraA03t15672Z Brassica rapa HOM05D003835 ORTHO05D004930 5.4e-16 89.4 234 35.0
BcaC01g02117 Brassica carinata HOM05D003835 ORTHO05D004930 9.3e-16 88.6 77 57.1
BcaC09g48541 Brassica carinata HOM05D003835 ORTHO05D004930 1.3e-14 84.7 129 37.2
BcaB02g11345 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-14 84.3 97 42.3
BolC4t24276H Brassica oleracea HOM05D003835 ORTHO05D004930 1.7e-14 84.3 190 35.8
BcaC05g28699 Brassica carinata HOM05D007458 ORTHO05D009533 3.9e-14 83.2 100 45.0
BcaC05g28049 Brassica carinata HOM05D003835 ORTHO05D004930 8.7e-14 82.0 109 39.4
BcaC08g44357 Brassica carinata HOM05D003835 ORTHO05D004930 2.5e-13 80.5 92 42.4
BcaC06g35162 Brassica carinata HOM05D003835 ORTHO05D004930 1.6e-12 77.8 92 40.2
BcaC03g16787 Brassica carinata HOM05D003835 ORTHO05D004930 2.1e-12 77.4 91 47.3
BcaC06g36053 Brassica carinata HOM05D003835 ORTHO05D004930 2.1e-12 77.4 45 80.0
BcaC03g16228 Brassica carinata HOM05D003835 ORTHO05D004930 4.8e-12 76.3 90 42.2
BolC8t47785H Brassica oleracea HOM05D003835 ORTHO05D004930 4.8e-12 76.3 46 78.3
BcaC04g20887 Brassica carinata HOM05D003835 ORTHO05D004930 8.1e-12 75.5 50 78.0
BcaB04g17199 Brassica carinata HOM05D003835 ORTHO05D004930 2.4e-11 73.9 53 64.2
BcaC07g37471 Brassica carinata HOM05D003835 ORTHO05D004930 2.4e-11 73.9 46 73.9
BcaB05g23111 Brassica carinata HOM05D003835 ORTHO05D004930 3.1e-11 73.6 47 68.1
BcaC03g16405 Brassica carinata HOM05D003835 ORTHO05D004930 3.1e-11 73.6 82 51.2
BcaC05g27823 Brassica carinata HOM05D003835 ORTHO05D004930 3.1e-11 73.6 41 85.4
BcaC03g14834 Brassica carinata HOM05D003835 ORTHO05D004930 5.3e-11 72.8 92 40.2
BcaC03g16230 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-10 71.2 39 87.2
BolC2t11372H Brassica oleracea HOM05D003835 ORTHO05D004930 1.5e-10 71.2 74 45.9
CARHR257890 Cardamine hirsuta HOM05D003835 ORTHO05D004930 2.6e-10 70.5 115 30.4
Thhalv10002744m.g Eutrema salsugineum HOM05D003835 ORTHO05D004930 3.4e-10 70.1 85 40.0
BcaB06g26908 Brassica carinata HOM05D003835 ORTHO05D004930 4.5e-10 69.7 43 67.4
BcaC09g50045 Brassica carinata HOM05D003835 ORTHO05D004930 4.5e-10 69.7 98 39.8
BcaB03g16388 Brassica carinata HOM05D003835 ORTHO05D004930 5.8e-10 69.3 88 44.3
BcaB08g35438 Brassica carinata HOM05D003835 ORTHO05D004930 7.6e-10 68.9 75 44.0
BolC7t40712H Brassica oleracea HOM05D003835 ORTHO05D004930 7.6e-10 68.9 35 91.4
BcaC06g35919 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-09 67.8 88 39.8
CANSAT35G0823 Cannabis sativa HOM05D014149 ORTHO05D004930 1.7e-09 67.8 114 33.3
CANSAT25G0896 Cannabis sativa HOM05D012521 ORTHO05D011451 2.9e-09 67.0 136 34.6
CANSAT54G2560 Cannabis sativa HOM05D012521 ORTHO05D011451 4.9e-09 66.2 136 34.6
BolC5t32809H Brassica oleracea HOM05D007458 ORTHO05D009533 1.9e-08 64.3 79 41.8
CANSAT01G2276 Cannabis sativa HOM05D014149 ORTHO05D011451 2.4e-08 63.9 87 36.8
BcaC01g02120 Brassica carinata HOM05D003835 ORTHO05D004930 4.2e-08 63.2 37 75.7
CANSAT35G1012 Cannabis sativa HOM05D027150 ORTHO05D028423 4.2e-08 63.2 94 36.2
BraA05t21178Z Brassica rapa HOM05D003835 ORTHO05D004930 7.1e-08 62.4 115 35.7
BcaB04g18230 Brassica carinata HOM05D003835 ORTHO05D004930 9.3e-08 62.0 88 35.2
TWI59G0099 Tripterygium wilfordii HOM05D011150 ORTHO05D011451 1.2e-07 61.6 161 30.4
BraA05t21204Z Brassica rapa HOM05D003835 ORTHO05D004930 2.7e-07 60.5 44 63.6
TWI36G1199 Tripterygium wilfordii HOM05D012521 ORTHO05D000116 2.7e-07 60.5 110 32.7
BcaC03g16471 Brassica carinata HOM05D003835 ORTHO05D004930 3.5e-07 60.1 35 80.0
BcaC03g16553 Brassica carinata HOM05D003835 ORTHO05D004930 3.5e-07 60.1 45 62.2
SalBow5G3953 Salvia bowleyana HOM05D010617 ORTHO05D011805 6.0e-07 59.3 95 32.6
BcaC06g36783 Brassica carinata HOM05D003835 ORTHO05D004930 7.9e-07 58.9 35 74.3
BraA09t38710Z Brassica rapa HOM05D003835 ORTHO05D019916 7.9e-07 58.9 87 39.1
BraA08t32793Z Brassica rapa HOM05D007458 ORTHO05D009533 1.0e-06 58.5 73 41.1
SalBow5G1224 Salvia bowleyana HOM05D010617 ORTHO05D011805 1.0e-06 58.5 95 33.7
SalBow5G2537 Salvia bowleyana HOM05D010617 ORTHO05D011805 1.0e-06 58.5 95 33.7
BolC3t19107H Brassica oleracea HOM05D003835 ORTHO05D004930 1.8e-06 57.8 38 68.4
QL04p004305 Quercus lobata HOM05D000311 ORTHO05D000183 1.8e-06 57.8 99 38.4
QL11p042019 Quercus lobata HOM05D003372 ORTHO05D000116 1.8e-06 57.8 99 38.4
SalBow5G4492 Salvia bowleyana HOM05D010617 ORTHO05D011805 1.8e-06 57.8 94 33.0
BolC6t37079H Brassica oleracea HOM05D058067 ORTHO05D041184 2.3e-06 57.4 192 25.5
BcaC04g20885 Brassica carinata HOM05D003835 ORTHO05D004930 3.0e-06 57.0 73 38.4
A04p11820 Brassica napus HOM05D003835 ORTHO05D004930 3.0e-06 57.0 71 36.6
QL05p031643 Quercus lobata HOM05D009413 ORTHO05D000116 3.0e-06 57.0 123 29.3
QL10p041460 Quercus lobata HOM05D009413 ORTHO05D000116 3.0e-06 57.0 123 29.3
QL11p005301 Quercus lobata HOM05D009413 ORTHO05D000116 3.0e-06 57.0 123 29.3
BcaC09g49877 Brassica carinata HOM05D003835 ORTHO05D004930 3.9e-06 56.6 71 40.8
C06p18740 Brassica napus HOM05D058067 ORTHO05D041184 3.9e-06 56.6 191 25.7
Oeu023903.1 Olea europaea HOM05D011150 ORTHO05D011451 6.7e-06 55.8 102 30.4


User provided reference genes

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