Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g27814 Brassica carinata HOM05D008703 ORTHO05D006961 3.1e-32 141.4 79 100.0
C05p38160 Brassica napus HOM05D008703 ORTHO05D006961 3.1e-32 141.4 79 100.0
A05p24420 Brassica napus HOM05D008703 ORTHO05D006961 2.6e-31 138.3 79 98.7
BolC5t32543H Brassica oleracea HOM05D008703 ORTHO05D006961 2.6e-31 138.3 79 98.7
BraA05t21333Z Brassica rapa HOM05D008703 ORTHO05D006961 2.6e-31 138.3 79 98.7
Sp1g28080 Schrenkiella parvula HOM05D008703 ORTHO05D006961 2.0e-23 112.1 80 76.2
A09p33470 Brassica napus HOM05D008703 ORTHO05D006961 2.3e-19 98.6 82 69.5
BraA09t38889Z Brassica rapa HOM05D008703 ORTHO05D006961 2.3e-19 98.6 82 69.5
Thhalv10009742m.g Eutrema salsugineum HOM05D008703 ORTHO05D006961 1.9e-18 95.5 84 65.5
BcaC05g27316 Brassica carinata HOM05D008703 ORTHO05D006961 9.6e-18 93.2 84 71.4
BolC5t31969H Brassica oleracea HOM05D008703 ORTHO05D006961 9.6e-18 93.2 84 71.4
AT1G32928 Arabidopsis thaliana HOM05D008703 ORTHO05D006961 1.1e-16 89.7 85 64.7
CARHR032250 Cardamine hirsuta HOM05D008703 ORTHO05D006961 5.3e-16 87.4 81 63.0
AL1G47210 Arabidopsis lyrata HOM05D008703 ORTHO05D006961 9.0e-16 86.7 83 61.4
Thhalv10009230m.g Eutrema salsugineum HOM05D008703 ORTHO05D006961 4.5e-15 84.3 85 67.1
Carub.0001s3124 Capsella rubella HOM05D008703 ORTHO05D006961 4.9e-14 80.9 83 59.0
Aa31LG6G7520 Aethionema arabicum HOM05D008703 ORTHO05D006961 9.3e-13 76.6 84 54.8
AL1G47200 Arabidopsis lyrata HOM05D008703 ORTHO05D006961 9.3e-13 76.6 83 51.8
CARHR032240 Cardamine hirsuta HOM05D008703 ORTHO05D006961 3.5e-12 74.7 79 51.9
A09p33480 Brassica napus HOM05D008703 ORTHO05D006961 4.6e-12 74.3 82 53.7
BraA09t38890Z Brassica rapa HOM05D008703 ORTHO05D006961 4.6e-12 74.3 82 53.7
AT1G32920 Arabidopsis thaliana HOM05D008703 ORTHO05D006961 6.0e-12 73.9 79 48.1
BcaC05g27315 Brassica carinata HOM05D008703 ORTHO05D006961 3.0e-11 71.6 82 50.0
C05p32370 Brassica napus HOM05D008703 ORTHO05D006961 3.0e-11 71.6 82 50.0
BolC5t31968H Brassica oleracea HOM05D008703 ORTHO05D006961 3.0e-11 71.6 82 50.0
BcaB04g17983 Brassica carinata HOM05D008703 ORTHO05D006961 8.7e-11 70.1 80 50.0
A08p09220 Brassica napus HOM05D008703 ORTHO05D006961 8.7e-11 70.1 84 50.0
BraA08t32922Z Brassica rapa HOM05D008703 ORTHO05D006961 8.7e-11 70.1 84 50.0
Aa31LG6G7510 Aethionema arabicum HOM05D008703 ORTHO05D006961 1.1e-10 69.7 84 48.8
BcaC07g37617 Brassica carinata HOM05D008703 ORTHO05D006961 1.1e-10 69.7 80 48.8
BolC8t47976H Brassica oleracea HOM05D008703 ORTHO05D006961 1.1e-10 69.7 80 48.8
Thhalv10009241m.g Eutrema salsugineum HOM05D008703 ORTHO05D006961 2.5e-10 68.6 83 55.4
BcaC07g37618 Brassica carinata HOM05D008703 ORTHO05D006961 9.6e-10 66.6 80 47.5
THA.LOC104815392 Tarenaya hassleriana HOM05D008703 ORTHO05D006961 1.6e-09 65.9 81 46.9
Carub.0001s3123 Capsella rubella HOM05D008703 ORTHO05D006961 9.0e-08 60.1 89 44.9
Sp6g06920 Schrenkiella parvula HOM05D008703 ORTHO05D006961 1.5e-07 59.3 76 46.1
CARHR256120 Cardamine hirsuta HOM05D008703 ORTHO05D006961 5.8e-07 57.4 78 41.0
Thhalv10029203m.g Eutrema salsugineum HOM05D008703 ORTHO05D006961 1.7e-06 55.8 79 44.3
FvH4_5g10560 Fragaria vesca HOM05D008613 ORTHO05D006961 1.7e-06 55.8 83 38.6
FAN18G1327 Fragaria x ananassa HOM05D008613 ORTHO05D006961 1.7e-06 55.8 83 38.6
AL6G44550 Arabidopsis lyrata HOM05D008703 ORTHO05D006961 2.2e-06 55.5 79 44.3
Sp6g06940 Schrenkiella parvula HOM05D008703 ORTHO05D006961 2.2e-06 55.5 74 43.2
Potri.001G449800 Populus trichocarpa HOM05D008613 ORTHO05D006961 2.9e-06 55.1 87 40.2
Potri.001G449900 Populus trichocarpa HOM05D008613 ORTHO05D006961 2.9e-06 55.1 87 40.2
Atru.chr9.1866 Acer truncatum HOM05D008613 ORTHO05D006961 3.8e-06 54.7 85 40.0
Solyc03g081330.1 Solanum lycopersicum HOM05D008837 ORTHO05D006961 3.8e-06 54.7 85 37.6
Potri.001G450000 Populus trichocarpa HOM05D008613 ORTHO05D006961 4.9e-06 54.3 87 39.1
Sabra16G0303600 Salix brachista HOM05D008613 ORTHO05D006961 6.4e-06 53.9 88 38.6
Sabra16G0303800 Salix brachista HOM05D008613 ORTHO05D006961 6.4e-06 53.9 88 38.6
Sed0012511 Sechium edule HOM05D018156 ORTHO05D006961 8.4e-06 53.5 83 42.2


User provided reference genes

Program Settings