Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g27731 Brassica carinata HOM05D006289 ORTHO05D024275 9.3e-153 543.5 273 100.0
C05p37190 Brassica napus HOM05D005627 ORTHO05D024275 3.1e-132 475.3 273 91.2
C09p50140 Brassica napus HOM05D006289 ORTHO05D024275 4.1e-76 288.9 280 58.2
BcaB08g35417 Brassica carinata HOM05D006289 ORTHO05D024275 1.2e-70 270.8 273 54.2
BcaB05g23251 Brassica carinata HOM05D005627 ORTHO05D009842 1.3e-40 171.0 277 42.2
BcaB08g34566 Brassica carinata HOM05D005627 ORTHO05D009842 2.7e-35 153.3 277 39.4
BcaC04g19885 Brassica carinata HOM05D005627 ORTHO05D017564 3.6e-32 142.9 159 51.6
BcaC05g27033 Brassica carinata HOM05D005627 ORTHO05D031886 7.9e-27 125.2 277 35.4
C05p28910 Brassica napus HOM05D005627 ORTHO05D031886 6.7e-26 122.1 264 36.0
BolC5t31612H Brassica oleracea HOM05D005627 ORTHO05D031886 6.7e-26 122.1 264 36.0
BcaB01g00118 Brassica carinata HOM05D005627 ORTHO05D009842 1.1e-25 121.3 231 37.2
BcaC04g21092 Brassica carinata HOM05D005627 ORTHO05D031749 1.9e-20 104.0 68 75.0
C09p35790 Brassica napus HOM05D005627 ORTHO05D031749 1.9e-20 104.0 68 75.0
BolC9t56413H Brassica oleracea HOM05D005627 ORTHO05D031749 1.9e-20 104.0 68 75.0
BcaB07g30175 Brassica carinata HOM05D005627 ORTHO05D019933 1.0e-18 98.2 221 32.6
BcaB03g16579 Brassica carinata HOM05D006289 ORTHO05D019933 2.8e-16 90.1 208 31.7
BolC9t57872H Brassica oleracea HOM05D006289 ORTHO05D024275 8.2e-16 88.6 58 72.4
BraA05t20012Z Brassica rapa HOM05D005627 ORTHO05D021730 6.9e-15 85.5 191 35.1
BcaB03g16259 Brassica carinata HOM05D005627 ORTHO05D021730 2.2e-13 80.5 184 35.9
BcaC08g47004 Brassica carinata HOM05D005627 ORTHO05D019933 6.5e-13 79.0 224 29.5
BcaB04g18536 Brassica carinata HOM05D005627 ORTHO05D009842 9.3e-12 75.1 163 33.7
BcaC08g46979 Brassica carinata HOM05D005627 ORTHO05D019933 2.7e-11 73.6 218 29.4
BcaB04g19296 Brassica carinata HOM05D006289 ORTHO05D017564 3.5e-11 73.2 159 30.2
BcaC04g20743 Brassica carinata HOM05D006289 ORTHO05D027118 7.9e-11 72.0 245 31.0
BolC9t56847H Brassica oleracea HOM05D005627 ORTHO05D021730 7.9e-11 72.0 239 29.7
BraA01t02126Z Brassica rapa HOM05D005627 ORTHO05D021730 2.3e-10 70.5 56 58.9
C02p45470 Brassica napus HOM05D006289 ORTHO05D103884 6.7e-10 68.9 56 57.1
C09p39670 Brassica napus HOM05D005627 ORTHO05D021730 8.7e-10 68.6 258 29.8
BcaC09g49023 Brassica carinata HOM05D006289 ORTHO05D018698 3.3e-09 66.6 56 57.1
BraA02t08906Z Brassica rapa HOM05D005627 ORTHO05D019933 4.3e-09 66.2 214 30.4
BcaB03g12380 Brassica carinata HOM05D006289 ORTHO05D092672 5.7e-09 65.9 90 42.2
A09p28380 Brassica napus HOM05D005627 ORTHO05D021730 5.7e-09 65.9 246 27.2
A03p68400 Brassica napus HOM05D005627 ORTHO05D017564 2.2e-08 63.9 63 52.4
A04p11360 Brassica napus HOM05D005627 ORTHO05D019933 3.1e-07 60.1 214 29.4
BolC9t58083H Brassica oleracea HOM05D006289 ORTHO05D018698 3.1e-07 60.1 56 53.6
BraA04t16798Z Brassica rapa HOM05D005627 ORTHO05D019933 3.1e-07 60.1 214 29.4
BcaB06g26983 Brassica carinata HOM05D005627 ORTHO05D039808 1.2e-06 58.2 62 50.0
C01p43400 Brassica napus HOM05D025394 ORTHO05D018698 1.2e-06 58.2 43 62.8
BraA07t28778Z Brassica rapa HOM05D025394 ORTHO05D018698 2.0e-06 57.4 43 60.5
BcaB01g01914 Brassica carinata HOM05D005627 ORTHO05D009842 3.4e-06 56.6 224 28.1
BcaC01g02303 Brassica carinata HOM05D006289 ORTHO05D018698 5.9e-06 55.8 43 60.5
BraA06t24709Z Brassica rapa HOM05D025394 ORTHO05D018698 5.9e-06 55.8 43 58.1
BolC3t18951H Brassica oleracea HOM05D025394 ORTHO05D018698 7.7e-06 55.5 103 37.9
C03p66830 Brassica napus HOM05D025394 ORTHO05D018698 1.0e-05 55.1 103 37.9


User provided reference genes

Program Settings