Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g27686 Brassica carinata HOM05D008465 ORTHO05D010905 9.0e-201 703.4 350 100.0
BolC6t36352H Brassica oleracea HOM05D008465 ORTHO05D010905 1.2e-109 400.6 364 61.0
A10p08450 Brassica napus HOM05D008465 ORTHO05D010905 4.3e-94 349.0 272 69.1
BNapus_Darmor_BZH_scaffold_258p00010 Brassica napus HOM05D008465 ORTHO05D010905 1.1e-92 344.4 272 68.0
A08p07880 Brassica napus HOM05D008465 ORTHO05D010905 1.1e-78 297.7 277 58.8
A08p07810 Brassica napus HOM05D008465 ORTHO05D010905 6.9e-76 288.5 277 57.0
BraA08t33370Z Brassica rapa HOM05D008465 ORTHO05D010905 9.9e-75 284.6 201 74.1
BNapus_Darmor_BZH_scaffold_51p00140 Brassica napus HOM05D008465 ORTHO05D010905 1.1e-73 281.2 233 64.8
A06p22940 Brassica napus HOM05D008465 ORTHO05D010905 6.0e-72 275.4 201 74.1
BraA01t02771Z Brassica rapa HOM05D008465 ORTHO05D010905 3.8e-66 256.1 183 70.5
BNapus_Darmor_BZH_scaffold_94p00010 Brassica napus HOM05D008465 ORTHO05D010905 8.4e-66 255.0 172 73.8
BraA08t33368Z Brassica rapa HOM05D008465 ORTHO05D010905 1.9e-65 253.8 137 87.6
BcaC08g43830 Brassica carinata HOM05D008465 ORTHO05D010905 3.3e-62 243.0 210 64.8
A03p67080 Brassica napus HOM05D008465 ORTHO05D010905 6.3e-61 238.8 206 61.7
BNapus_Darmor_BZH_scaffold_51p00100 Brassica napus HOM05D008465 ORTHO05D010905 1.4e-60 237.7 206 61.7
BcaC02g10606 Brassica carinata HOM05D012556 ORTHO05D000563 6.1e-56 222.2 154 74.7
BNapus_Darmor_BZH_scaffold_143p00020 Brassica napus HOM05D008465 ORTHO05D010905 2.0e-54 217.2 208 54.3
BNapus_Darmor_BZH_scaffold_45p00040 Brassica napus HOM05D008465 ORTHO05D010905 5.7e-54 215.7 208 53.8
BNapus_Darmor_BZH_scaffold_51p00010 Brassica napus HOM05D008465 ORTHO05D010905 1.4e-52 211.1 145 71.7
C09p38420 Brassica napus HOM05D008465 ORTHO05D021937 4.5e-51 206.1 269 49.4
BcaC05g27951 Brassica carinata HOM05D008465 ORTHO05D021937 2.3e-47 193.7 106 98.1
C06p20990 Brassica napus HOM05D008465 ORTHO05D021937 6.7e-47 192.2 215 54.9
BolC1t02569H Brassica oleracea HOM05D008465 ORTHO05D033806 1.3e-45 188.0 197 54.3
BolC1t02570H Brassica oleracea HOM05D008465 ORTHO05D033806 6.3e-45 185.7 210 52.4
BcaC01g02201 Brassica carinata HOM05D008465 ORTHO05D010905 2.5e-41 173.7 243 45.3
BcaB03g16205 Brassica carinata HOM05D008465 ORTHO05D010905 4.4e-38 162.9 147 56.5
BNapus_Darmor_BZH_scaffold_69p00050 Brassica napus HOM05D008465 ORTHO05D021937 1.6e-35 154.5 201 48.8
BolC8t47943H Brassica oleracea HOM05D012556 ORTHO05D000563 8.8e-31 138.7 174 47.7
A07p05690 Brassica napus HOM05D008465 ORTHO05D042024 1.5e-30 137.9 150 51.3
BraA07t28363Z Brassica rapa HOM05D008465 ORTHO05D042024 1.5e-30 137.9 150 51.3
BcaNung01941 Brassica carinata HOM05D008465 ORTHO05D010905 3.4e-30 136.7 143 55.9
BcaB02g11328 Brassica carinata HOM05D012556 ORTHO05D000563 2.4e-28 130.6 120 59.2
C03p65320 Brassica napus HOM05D008465 ORTHO05D010905 3.1e-28 130.2 103 65.0
BNapus_Darmor_BZH_scaffold_45p00060 Brassica napus HOM05D008465 ORTHO05D010905 9.1e-28 128.6 103 64.1
BNapus_Darmor_BZH_scaffold_51p00080 Brassica napus HOM05D008465 ORTHO05D010905 2.7e-27 127.1 102 63.7
BNapus_Darmor_BZH_scaffold_143p00010 Brassica napus HOM05D008465 ORTHO05D010905 8.5e-26 122.1 103 63.1
BNapus_Darmor_BZH_scaffold_51p00120 Brassica napus HOM05D008465 ORTHO05D010905 1.5e-25 121.3 102 60.8
BNapus_Darmor_BZH_scaffold_197p00010 Brassica napus HOM05D008465 ORTHO05D010905 1.6e-24 117.9 102 59.8
C02p42720 Brassica napus HOM05D008465 ORTHO05D010905 1.8e-23 114.4 102 57.8
BolC8t47644H Brassica oleracea HOM05D008465 ORTHO05D033806 1.5e-22 111.3 145 46.2
BNapus_Darmor_BZH_scaffold_45p00050 Brassica napus HOM05D008465 ORTHO05D010905 2.6e-22 110.5 102 56.9
BolC9t56697H Brassica oleracea HOM05D008795 ORTHO05D027698 5.4e-20 102.8 302 31.1
BcaB03g16191 Brassica carinata HOM05D008465 ORTHO05D092063 1.4e-15 88.2 72 59.7
BcaB03g16197 Brassica carinata HOM05D012556 ORTHO05D000563 7.5e-14 82.4 81 61.7
C06p23460 Brassica napus HOM05D008465 ORTHO05D010905 9.2e-12 75.5 44 75.0
BNapus_Darmor_BZH_scaffold_51p00050 Brassica napus HOM05D008465 ORTHO05D010905 2.7e-11 73.9 161 36.6
THA.LOC109116034 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 3.1e-07 60.5 55 43.6
Cpa.g.sc28.117 Carica papaya HOM05D000004 ORTHO05D000563 5.2e-07 59.7 55 43.6
SHI46673 Sapria himalayana HOM05D000004 ORTHO05D000002 6.8e-07 59.3 55 47.3
SHI47923 Sapria himalayana HOM05D000004 ORTHO05D000563 6.8e-07 59.3 55 47.3
SHI48037 Sapria himalayana HOM05D000004 ORTHO05D000563 6.8e-07 59.3 55 47.3
SHI49269 Sapria himalayana HOM05D000004 ORTHO05D000563 6.8e-07 59.3 55 47.3
SHI50247 Sapria himalayana HOM05D000004 ORTHO05D000563 6.8e-07 59.3 55 47.3
SHI37133 Sapria himalayana HOM05D000004 ORTHO05D000002 8.9e-07 58.9 77 37.7
Cpa.g.sc971.2 Carica papaya HOM05D000004 ORTHO05D000563 2.0e-06 57.8 55 40.0
SHI47494 Sapria himalayana HOM05D000004 ORTHO05D000563 2.0e-06 57.8 55 45.5
SHI51310 Sapria himalayana HOM05D000004 ORTHO05D000002 2.0e-06 57.8 77 37.7
SHI53258 Sapria himalayana HOM05D000004 ORTHO05D000563 2.0e-06 57.8 65 43.1
SHI47910 Sapria himalayana HOM05D000004 ORTHO05D000002 2.6e-06 57.4 55 47.3
SHI48187 Sapria himalayana HOM05D000004 ORTHO05D000002 2.6e-06 57.4 55 47.3
TPR.G39664 Trifolium pratense HOM05D000004 ORTHO05D000563 2.6e-06 57.4 74 36.5
SHI39813 Sapria himalayana HOM05D000004 ORTHO05D000563 3.4e-06 57.0 77 37.7
SHI47629 Sapria himalayana HOM05D000004 ORTHO05D000563 3.4e-06 57.0 77 37.7
SHI40836 Sapria himalayana HOM05D000004 ORTHO05D000563 4.4e-06 56.6 77 37.7
SHI45527 Sapria himalayana HOM05D000004 ORTHO05D000002 4.4e-06 56.6 77 37.7
SHI47695 Sapria himalayana HOM05D000004 ORTHO05D000002 4.4e-06 56.6 77 37.7
BcaB01g01328 Brassica carinata HOM05D012556 ORTHO05D027204 5.8e-06 56.2 104 36.5
SHI37899 Sapria himalayana HOM05D000004 ORTHO05D000002 5.8e-06 56.2 55 45.5
BcaB08g35281 Brassica carinata HOM05D012556 ORTHO05D010905 7.5e-06 55.8 131 33.6
SHI30189 Sapria himalayana HOM05D000004 ORTHO05D000563 7.5e-06 55.8 77 37.7
THA.LOC109116027 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 7.5e-06 55.8 76 38.2
MSTRG.13863 Avicennia marina HOM05D000004 ORTHO05D000563 9.8e-06 55.5 69 37.7
MSTRG.20360 Avicennia marina HOM05D000004 ORTHO05D000002 9.8e-06 55.5 69 37.7


User provided reference genes

Program Settings