Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g27626 Brassica carinata HOM05D001224 ORTHO05D003542 3.1e-47 191.4 96 100.0
BcaC05g27627 Brassica carinata HOM05D001224 ORTHO05D003542 3.1e-47 191.4 96 100.0
BcaC05g27630 Brassica carinata HOM05D001224 ORTHO05D001170 9.5e-36 153.3 79 98.7
BolC7t41112H Brassica oleracea HOM05D001224 ORTHO05D003542 5.2e-18 94.4 49 87.8
BcaC09g49195 Brassica carinata HOM05D001224 ORTHO05D003542 1.5e-17 92.8 96 60.4
BcaC06g35692 Brassica carinata HOM05D001224 ORTHO05D003542 5.6e-12 74.3 35 100.0
A10p06600 Brassica napus HOM05D001224 ORTHO05D003542 5.6e-12 74.3 35 100.0
A10p06840 Brassica napus HOM05D001224 ORTHO05D003542 5.6e-12 74.3 35 100.0
C05p36110 Brassica napus HOM05D001224 ORTHO05D003542 5.6e-12 74.3 35 100.0
C07p01200 Brassica napus HOM05D001224 ORTHO05D003542 5.6e-12 74.3 35 100.0
BraA09t40148Z Brassica rapa HOM05D001224 ORTHO05D003542 5.6e-12 74.3 35 100.0
BolC5t32335H Brassica oleracea HOM05D001224 ORTHO05D003542 7.3e-12 73.9 36 94.4
BraA09t38882Z Brassica rapa HOM05D001224 ORTHO05D003542 7.3e-12 73.9 49 73.5
C07p01160 Brassica napus HOM05D001224 ORTHO05D003542 1.2e-11 73.2 35 97.1
BolC1t03177H Brassica oleracea HOM05D001224 ORTHO05D003542 1.2e-11 73.2 35 97.1
BcaC02g09035 Brassica carinata HOM05D001224 ORTHO05D003542 1.6e-11 72.8 35 97.1
BcaC05g27785 Brassica carinata HOM05D001224 ORTHO05D003542 1.6e-11 72.8 35 97.1
BcaC05g28168 Brassica carinata HOM05D001224 ORTHO05D003542 1.6e-11 72.8 35 97.1
BcaC09g48602 Brassica carinata HOM05D001224 ORTHO05D001170 1.6e-11 72.8 35 97.1
BcaC09g48839 Brassica carinata HOM05D001224 ORTHO05D003542 1.6e-11 72.8 35 97.1
A01p28550 Brassica napus HOM05D001224 ORTHO05D003542 1.6e-11 72.8 35 97.1
C04p47860 Brassica napus HOM05D001224 ORTHO05D003542 1.6e-11 72.8 35 97.1
C05p37790 Brassica napus HOM05D001224 ORTHO05D003542 1.6e-11 72.8 35 97.1
C05p42040 Brassica napus HOM05D001224 ORTHO05D003542 1.6e-11 72.8 35 97.1
BolC1t04761H Brassica oleracea HOM05D001224 ORTHO05D003542 1.6e-11 72.8 35 97.1
BolC6t35441H Brassica oleracea HOM05D001224 ORTHO05D003542 1.6e-11 72.8 35 97.1
BolC8t49591H Brassica oleracea HOM05D001224 ORTHO05D003542 1.6e-11 72.8 35 97.1
BcaC02g12295 Brassica carinata HOM05D001224 ORTHO05D003542 2.8e-11 72.0 35 97.1
BcaC06g35970 Brassica carinata HOM05D001224 ORTHO05D003542 2.8e-11 72.0 35 97.1
BolC6t36796H Brassica oleracea HOM05D001224 ORTHO05D003542 4.7e-11 71.2 34 97.1
A01p25430 Brassica napus HOM05D001224 ORTHO05D003542 6.2e-11 70.9 35 94.3
A05p28400 Brassica napus HOM05D001224 ORTHO05D003542 6.2e-11 70.9 35 94.3
C07p06930 Brassica napus HOM05D001224 ORTHO05D003542 6.2e-11 70.9 35 94.3
BraA01t03047Z Brassica rapa HOM05D001224 ORTHO05D003542 6.2e-11 70.9 35 94.3
BcaB06g27858 Brassica carinata HOM05D001224 ORTHO05D003542 8.1e-11 70.5 48 75.0
A08p09550 Brassica napus HOM05D001224 ORTHO05D003542 8.1e-11 70.5 35 97.1
BraA08t32952Z Brassica rapa HOM05D001224 ORTHO05D003542 8.1e-11 70.5 35 97.1
C05p45400 Brassica napus HOM05D001224 ORTHO05D003542 1.1e-10 70.1 35 97.1
A08p08840 Brassica napus HOM05D001224 ORTHO05D003542 1.4e-10 69.7 35 94.3
A10p08840 Brassica napus HOM05D001224 ORTHO05D003542 1.4e-10 69.7 35 94.3
BraSC37t46117Z Brassica rapa HOM05D001224 ORTHO05D003542 1.4e-10 69.7 35 94.3
BolC3t18910H Brassica oleracea HOM05D001224 ORTHO05D003542 1.8e-10 69.3 83 51.8
BraA01t02476Z Brassica rapa HOM05D001224 ORTHO05D003542 1.8e-10 69.3 34 94.1
A01p26300 Brassica napus HOM05D001224 ORTHO05D003542 2.4e-10 68.9 35 94.3
A03p54390 Brassica napus HOM05D001224 ORTHO05D003542 2.4e-10 68.9 35 94.3
C05p18360 Brassica napus HOM05D001224 ORTHO05D003542 3.1e-10 68.6 35 94.3
C07p38500 Brassica napus HOM05D001224 ORTHO05D003542 5.2e-10 67.8 51 66.7
BcaC05g28453 Brassica carinata HOM05D001224 ORTHO05D003542 1.5e-09 66.2 34 94.1
BraA03t14504Z Brassica rapa HOM05D001224 ORTHO05D003542 2.0e-09 65.9 35 91.4
C06p04840 Brassica napus HOM05D001224 ORTHO05D003542 2.6e-09 65.5 35 91.4
BolC3t20360H Brassica oleracea HOM05D001224 ORTHO05D003542 3.4e-09 65.1 35 88.6
BcaB07g33940 Brassica carinata HOM05D001224 ORTHO05D003542 5.8e-09 64.3 35 85.7
BolC4t23824H Brassica oleracea HOM05D001224 ORTHO05D003542 5.8e-09 64.3 35 85.7
BcaB02g11315 Brassica carinata HOM05D001498 ORTHO05D008559 9.9e-09 63.5 41 73.2
BcaB07g33216 Brassica carinata HOM05D001224 ORTHO05D003542 9.9e-09 63.5 35 82.9
C06p05150 Brassica napus HOM05D001224 ORTHO05D003542 1.3e-08 63.2 35 82.9
C04p09750 Brassica napus HOM05D001224 ORTHO05D003542 1.7e-08 62.8 35 82.9
BolC4t22583H Brassica oleracea HOM05D001224 ORTHO05D003542 1.7e-08 62.8 35 82.9
BcaB06g26726 Brassica carinata HOM05D001224 ORTHO05D003542 2.9e-08 62.0 35 80.0
BcaB03g16496 Brassica carinata HOM05D001224 ORTHO05D003542 4.9e-08 61.2 35 77.1
BolC3t18885H Brassica oleracea HOM05D001224 ORTHO05D003542 4.9e-08 61.2 35 80.0
BcaB06g27272 Brassica carinata HOM05D001224 ORTHO05D003542 6.4e-08 60.8 35 80.0
BcaB04g17427 Brassica carinata HOM05D001224 ORTHO05D003542 1.9e-07 59.3 35 80.0
BcaB01g01308 Brassica carinata HOM05D001224 ORTHO05D003542 4.2e-07 58.2 35 74.3
C04p20870 Brassica napus HOM05D001224 ORTHO05D003542 4.2e-07 58.2 35 80.0
C07p07600 Brassica napus HOM05D001224 ORTHO05D003542 4.2e-07 58.2 35 77.1
C09p42280 Brassica napus HOM05D001224 ORTHO05D003542 4.2e-07 58.2 35 80.0
BolC7t41181H Brassica oleracea HOM05D001224 ORTHO05D003542 4.2e-07 58.2 35 77.1
BolC9t57106H Brassica oleracea HOM05D001224 ORTHO05D003542 4.2e-07 58.2 35 80.0
C01p38780 Brassica napus HOM05D001224 ORTHO05D003542 5.4e-07 57.8 35 80.0
BolC1t03835H Brassica oleracea HOM05D001224 ORTHO05D003542 5.4e-07 57.8 35 80.0
BolC6t38483H Brassica oleracea HOM05D001224 ORTHO05D003542 7.1e-07 57.4 35 77.1
BcaC05g25873 Brassica carinata HOM05D001224 ORTHO05D003542 9.3e-07 57.0 34 73.5
BcaC09g48966 Brassica carinata HOM05D001224 ORTHO05D003542 9.3e-07 57.0 34 73.5
A01p20520 Brassica napus HOM05D001224 ORTHO05D003542 9.3e-07 57.0 34 73.5
A03p65930 Brassica napus HOM05D001224 ORTHO05D003542 9.3e-07 57.0 34 73.5
A08p09950 Brassica napus HOM05D001224 ORTHO05D003542 9.3e-07 57.0 34 73.5
A09p33390 Brassica napus HOM05D001224 ORTHO05D003542 9.3e-07 57.0 34 73.5
C01p30530 Brassica napus HOM05D001224 ORTHO05D003542 9.3e-07 57.0 34 73.5
C01p44930 Brassica napus HOM05D001224 ORTHO05D003542 9.3e-07 57.0 34 73.5
C02p53510 Brassica napus HOM05D001224 ORTHO05D003542 9.3e-07 57.0 34 73.5
C03p65990 Brassica napus HOM05D001224 ORTHO05D003542 9.3e-07 57.0 34 73.5
C04p21370 Brassica napus HOM05D001224 ORTHO05D003542 9.3e-07 57.0 34 73.5
C05p34940 Brassica napus HOM05D001224 ORTHO05D003542 9.3e-07 57.0 34 73.5
C07p30720 Brassica napus HOM05D001224 ORTHO05D003542 9.3e-07 57.0 34 73.5
C07p49100 Brassica napus HOM05D001224 ORTHO05D003542 9.3e-07 57.0 34 73.5
C08p06680 Brassica napus HOM05D001224 ORTHO05D003542 9.3e-07 57.0 34 73.5
C08p08880 Brassica napus HOM05D001224 ORTHO05D003542 9.3e-07 57.0 34 73.5
C09p16570 Brassica napus HOM05D001224 ORTHO05D003542 9.3e-07 57.0 34 73.5
C09p19450 Brassica napus HOM05D001224 ORTHO05D003542 9.3e-07 57.0 34 73.5
C09p21160 Brassica napus HOM05D001224 ORTHO05D003542 9.3e-07 57.0 34 73.5
C09p27480 Brassica napus HOM05D001224 ORTHO05D003542 9.3e-07 57.0 34 73.5
C09p28480 Brassica napus HOM05D001224 ORTHO05D003542 9.3e-07 57.0 34 73.5
BolC3t18859H Brassica oleracea HOM05D001224 ORTHO05D003542 9.3e-07 57.0 34 73.5
BolC6t36240H Brassica oleracea HOM05D001224 ORTHO05D003542 9.3e-07 57.0 34 73.5
BolC6t36735H Brassica oleracea HOM05D001224 ORTHO05D003542 9.3e-07 57.0 34 73.5
BolC9t55018H Brassica oleracea HOM05D001224 ORTHO05D003542 9.3e-07 57.0 34 73.5
BolC9t57316H Brassica oleracea HOM05D001224 ORTHO05D003542 9.3e-07 57.0 34 73.5
BraA01t03049Z Brassica rapa HOM05D001224 ORTHO05D003542 9.3e-07 57.0 34 73.5
BraA07t28348Z Brassica rapa HOM05D001224 ORTHO05D003542 9.3e-07 57.0 34 73.5
BraA08t32989Z Brassica rapa HOM05D001224 ORTHO05D003542 9.3e-07 57.0 34 73.5
A03p54410 Brassica napus HOM05D001224 ORTHO05D003542 1.2e-06 56.6 34 73.5
C04p41850 Brassica napus HOM05D001224 ORTHO05D003542 1.2e-06 56.6 34 73.5
C07p05290 Brassica napus HOM05D001224 ORTHO05D003542 1.2e-06 56.6 35 77.1
BolC7t40929H Brassica oleracea HOM05D001224 ORTHO05D003542 1.2e-06 56.6 35 77.1
BraA10t42919Z Brassica rapa HOM05D001224 ORTHO05D003542 1.6e-06 56.2 34 70.6
BcaC06g36118 Brassica carinata HOM05D001224 ORTHO05D003542 2.1e-06 55.8 35 74.3
C02p39450 Brassica napus HOM05D001224 ORTHO05D003542 2.1e-06 55.8 35 77.1
BolC2t09958H Brassica oleracea HOM05D001224 ORTHO05D003542 2.1e-06 55.8 35 77.1
C03p75870 Brassica napus HOM05D001224 ORTHO05D003542 2.7e-06 55.5 34 70.6
C05p44750 Brassica napus HOM05D001224 ORTHO05D003542 2.7e-06 55.5 33 72.7
BcaC08g44372 Brassica carinata HOM05D001224 ORTHO05D003542 3.5e-06 55.1 34 70.6
C07p08890 Brassica napus HOM05D001224 ORTHO05D003542 3.5e-06 55.1 45 55.6
BolC7t41301H Brassica oleracea HOM05D001224 ORTHO05D003542 3.5e-06 55.1 45 55.6
BraA03t14506Z Brassica rapa HOM05D001224 ORTHO05D003542 3.5e-06 55.1 34 73.5
BcaC08g43734 Brassica carinata HOM05D001224 ORTHO05D003542 4.6e-06 54.7 34 67.6
A07p02040 Brassica napus HOM05D001224 ORTHO05D003542 4.6e-06 54.7 34 70.6
BcaC06g36018 Brassica carinata HOM05D001224 ORTHO05D003542 6.0e-06 54.3 35 65.7
BcaC05g26485 Brassica carinata HOM05D001224 ORTHO05D003542 7.8e-06 53.9 52 51.9
A06p28380 Brassica napus HOM05D001224 ORTHO05D003542 7.8e-06 53.9 35 74.3
BolC3t19483H Brassica oleracea HOM05D001224 ORTHO05D003542 7.8e-06 53.9 34 70.6
BraA06t25781Z Brassica rapa HOM05D001224 ORTHO05D003542 7.8e-06 53.9 35 74.3


User provided reference genes

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