Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g27620 Brassica carinata HOM05D007011 ORTHO05D008837 8.3e-182 640.2 312 100.0
C05p36090 Brassica napus HOM05D007011 ORTHO05D008837 8.3e-182 640.2 312 100.0
C06p04860 Brassica napus HOM05D007011 ORTHO05D008837 7.5e-175 617.1 312 96.2
C07p11040 Brassica napus HOM05D007011 ORTHO05D008837 1.2e-172 609.8 312 96.5
C04p55380 Brassica napus HOM05D007011 ORTHO05D008837 2.7e-172 608.6 312 95.8
C03p58260 Brassica napus HOM05D007011 ORTHO05D008837 3.5e-172 608.2 312 95.5
C07p11970 Brassica napus HOM05D007011 ORTHO05D008837 1.6e-169 599.4 305 95.1
BcaC05g28456 Brassica carinata HOM05D007011 ORTHO05D008837 5.1e-163 577.8 312 92.3
C05p27360 Brassica napus HOM05D007011 ORTHO05D008837 9.6e-162 573.5 312 91.7
BcaC02g12297 Brassica carinata HOM05D007011 ORTHO05D008837 2.9e-158 562.0 312 90.1
BcaC06g35773 Brassica carinata HOM05D007011 ORTHO05D008837 3.9e-155 551.6 312 88.8
BcaB06g27203 Brassica carinata HOM05D007011 ORTHO05D008837 4.9e-142 508.1 297 82.8
BcaB04g16982 Brassica carinata HOM05D007011 ORTHO05D008837 5.1e-139 498.0 310 77.1
BcaB05g24511 Brassica carinata HOM05D007011 ORTHO05D008837 4.8e-137 491.5 304 78.0
BolC6t35445H Brassica oleracea HOM05D007011 ORTHO05D008837 1.9e-130 469.5 279 83.9
C04p47830 Brassica napus HOM05D007011 ORTHO05D008837 5.9e-119 431.4 279 79.6
BraA06t25341Z Brassica rapa HOM05D007011 ORTHO05D008837 7.9e-116 421.0 279 77.4
A07p05900 Brassica napus HOM05D007011 ORTHO05D008837 2.2e-110 402.9 279 74.6
C01p48060 Brassica napus HOM05D007011 ORTHO05D008837 7.2e-109 397.9 197 97.0
BcaC05g26483 Brassica carinata HOM05D007011 ORTHO05D008837 1.2e-98 364.0 273 64.1
BolC5t33266H Brassica oleracea HOM05D007011 ORTHO05D008837 3.3e-98 362.5 225 81.8
BcaB07g33137 Brassica carinata HOM05D007011 ORTHO05D008837 1.3e-89 334.0 285 58.6
BraA01t02471Z Brassica rapa HOM05D007011 ORTHO05D008837 1.4e-88 330.5 223 76.2
BcaC06g36231 Brassica carinata HOM05D007011 ORTHO05D008837 3.5e-87 325.9 244 63.9
C04p05480 Brassica napus HOM05D007011 ORTHO05D008837 4.3e-77 292.4 159 91.8
BcaB05g23795 Brassica carinata HOM05D007011 ORTHO05D008837 5.6e-77 292.0 171 81.3
BcaB01g01040 Brassica carinata HOM05D007011 ORTHO05D008837 4.9e-73 278.9 173 79.8
BcaB01g01187 Brassica carinata HOM05D007011 ORTHO05D008837 7.8e-71 271.6 155 83.9
C05p45430 Brassica napus HOM05D007011 ORTHO05D008837 4.0e-67 259.2 134 90.3
BcaB04g17596 Brassica carinata HOM05D007011 ORTHO05D008837 2.6e-66 256.5 155 77.4
C01p11610 Brassica napus HOM05D007011 ORTHO05D008837 1.4e-64 250.8 267 46.8
BcaC07g37533 Brassica carinata HOM05D007011 ORTHO05D008837 1.2e-63 247.7 302 44.4
BcaC02g07935 Brassica carinata HOM05D007011 ORTHO05D008837 6.0e-63 245.4 308 44.5
C05p14820 Brassica napus HOM05D007011 ORTHO05D008837 3.9e-62 242.7 269 45.7
BcaC06g36116 Brassica carinata HOM05D007011 ORTHO05D008837 2.5e-61 240.0 153 71.9
BolC3t21008H Brassica oleracea HOM05D007011 ORTHO05D008837 1.2e-60 237.7 267 44.9
BcaC06g34312 Brassica carinata HOM05D007011 ORTHO05D008837 2.8e-60 236.5 267 44.6
BolC8t48311H Brassica oleracea HOM05D007011 ORTHO05D008837 1.4e-59 234.2 249 45.4
BcaC05g28767 Brassica carinata HOM05D007011 ORTHO05D008837 4.0e-59 232.6 276 43.5
BcaC03g15015 Brassica carinata HOM05D007011 ORTHO05D008837 6.8e-59 231.9 267 45.3
BolC5t31113H Brassica oleracea HOM05D007011 ORTHO05D008837 7.5e-58 228.4 307 42.7
C06p40070 Brassica napus HOM05D007011 ORTHO05D008837 1.9e-56 223.8 269 43.5
C07p30430 Brassica napus HOM05D007011 ORTHO05D008837 2.1e-55 220.3 236 44.9
BolC5t33294H Brassica oleracea HOM05D007011 ORTHO05D008837 3.5e-55 219.5 237 45.6
BcaB05g22953 Brassica carinata HOM05D007011 ORTHO05D008837 6.0e-55 218.8 144 70.8
BcaC05g25628 Brassica carinata HOM05D007011 ORTHO05D008837 6.6e-54 215.3 301 41.5
BcaC08g45131 Brassica carinata HOM05D007011 ORTHO05D008837 9.5e-53 211.5 269 42.0
BcaC06g36019 Brassica carinata HOM05D007011 ORTHO05D008837 5.2e-51 205.7 179 59.8
BcaB07g33902 Brassica carinata HOM05D000977 ORTHO05D008837 1.2e-50 204.5 141 70.9
BcaC03g17624 Brassica carinata HOM05D007011 ORTHO05D008837 1.5e-50 204.1 304 40.8
BcaNung02468 Brassica carinata HOM05D007011 ORTHO05D008837 2.6e-50 203.4 192 51.6
BolC8t48619H Brassica oleracea HOM05D007011 ORTHO05D008837 2.6e-50 203.4 213 45.5
BcaC01g00089 Brassica carinata HOM05D007011 ORTHO05D008837 4.4e-50 202.6 192 50.5
BcaC05g25371 Brassica carinata HOM05D007011 ORTHO05D008837 5.8e-50 202.2 192 51.0
BcaC04g18660 Brassica carinata HOM05D007011 ORTHO05D008837 1.7e-49 200.7 192 51.0
BolC7t43583H Brassica oleracea HOM05D007011 ORTHO05D008837 2.7e-47 193.4 213 45.1
BcaC01g01763 Brassica carinata HOM05D007011 ORTHO05D008837 1.3e-46 191.0 191 49.2
C05p32490 Brassica napus HOM05D007011 ORTHO05D008837 3.3e-45 186.4 196 47.4
BolC5t31983H Brassica oleracea HOM05D007011 ORTHO05D008837 3.3e-45 186.4 196 47.4
BraA02t08974Z Brassica rapa HOM05D007011 ORTHO05D008837 5.6e-45 185.7 193 47.7
C06p20850 Brassica napus HOM05D007011 ORTHO05D008837 1.6e-44 184.1 228 44.3
BolC6t37272H Brassica oleracea HOM05D007011 ORTHO05D008837 1.6e-44 184.1 228 44.3
C08p05270 Brassica napus HOM05D007011 ORTHO05D008837 2.1e-44 183.7 235 43.0
BcaB01g01369 Brassica carinata HOM05D007011 ORTHO05D008837 6.2e-44 182.2 124 73.4
BcaB01g01479 Brassica carinata HOM05D007011 ORTHO05D008837 6.9e-43 178.7 269 38.3
BraA08t33780Z Brassica rapa HOM05D007011 ORTHO05D008837 2.6e-42 176.8 228 43.9
C01p38480 Brassica napus HOM05D007011 ORTHO05D008837 1.4e-40 171.0 175 48.0
BolC5t32331H Brassica oleracea HOM05D007011 ORTHO05D008837 2.0e-34 150.6 92 79.3
BolC5t31106H Brassica oleracea HOM05D007011 ORTHO05D008837 1.7e-33 147.5 132 53.8
BcaC08g44613 Brassica carinata HOM05D007011 ORTHO05D008837 1.4e-32 144.4 283 34.3
C07p51970 Brassica napus HOM05D007011 ORTHO05D008837 4.2e-32 142.9 151 47.0
C01p45340 Brassica napus HOM05D007011 ORTHO05D008837 1.2e-31 141.4 95 80.0
C03p75650 Brassica napus HOM05D007011 ORTHO05D008837 2.7e-31 140.2 125 53.6
BcaB01g01156 Brassica carinata HOM05D007011 ORTHO05D008837 1.8e-30 137.5 280 31.4
BcaC05g27327 Brassica carinata HOM05D000305 ORTHO05D000065 6.2e-28 129.0 196 36.7
BcaC06g36176 Brassica carinata HOM05D007011 ORTHO05D008837 1.5e-26 124.4 67 92.5
BraSC37t46121Z Brassica rapa HOM05D007011 ORTHO05D008837 4.5e-26 122.9 65 92.3
BcaC07g39807 Brassica carinata HOM05D007011 ORTHO05D008837 9.9e-26 121.7 199 38.7
BcaC02g09397 Brassica carinata HOM05D007011 ORTHO05D008837 6.0e-23 112.5 86 58.1
Carub.0033s0001 Capsella rubella HOM05D007011 ORTHO05D008837 6.0e-23 112.5 220 30.9
Carub.0008s2399 Capsella rubella HOM05D007011 ORTHO05D008837 1.8e-22 110.9 243 28.4
BcaB01g01041 Brassica carinata HOM05D007011 ORTHO05D008837 6.7e-22 109.0 63 82.5
BcaB07g32769 Brassica carinata HOM05D007011 ORTHO05D008837 4.3e-21 106.3 64 78.1
C03p69260 Brassica napus HOM05D007011 ORTHO05D008837 9.6e-21 105.1 74 67.6
BcaC01g06815 Brassica carinata HOM05D007011 ORTHO05D008837 1.6e-20 104.4 108 48.1
BolC3t19822H Brassica oleracea HOM05D007011 ORTHO05D008837 2.8e-20 103.6 97 48.5
BcaB03g15265 Brassica carinata HOM05D007011 ORTHO05D008837 9.0e-19 98.6 71 67.6
BcaB01g01570 Brassica carinata HOM05D007011 ORTHO05D008837 2.2e-17 94.0 62 69.4
BcaB04g17043 Brassica carinata HOM05D007011 ORTHO05D039564 3.8e-17 93.2 103 48.5
BcaB06g27941 Brassica carinata HOM05D007011 ORTHO05D008837 4.9e-17 92.8 63 69.8
C06p11410 Brassica napus HOM05D007011 ORTHO05D008837 4.9e-17 92.8 65 66.2
A01p25420 Brassica napus HOM05D001224 ORTHO05D014478 1.9e-16 90.9 42 100.0
BolC3t19184H Brassica oleracea HOM05D007011 ORTHO05D008837 1.2e-15 88.2 61 68.9
BcaC02g07943 Brassica carinata HOM05D007011 ORTHO05D008837 1.0e-14 85.1 80 47.5
BolC3t16993H Brassica oleracea HOM05D007011 ORTHO05D008837 3.0e-14 83.6 107 39.3
C06p14510 Brassica napus HOM05D007011 ORTHO05D008837 3.9e-14 83.2 83 43.4
Sp3g24020 Schrenkiella parvula HOM05D035215 ORTHO05D008837 1.9e-13 80.9 124 36.3
Carub.0211s0001 Capsella rubella HOM05D018391 ORTHO05D020270 7.4e-13 79.0 306 25.8
BcaB06g26315 Brassica carinata HOM05D007011 ORTHO05D008837 2.8e-12 77.0 69 62.3
BcaB07g32280 Brassica carinata HOM05D007011 ORTHO05D008837 4.1e-11 73.2 95 42.1
BolC2t10145H Brassica oleracea HOM05D007011 ORTHO05D042806 4.1e-11 73.2 179 30.2
BcaC06g36163 Brassica carinata HOM05D007011 ORTHO05D008837 1.2e-10 71.6 133 36.1
C01p39260 Brassica napus HOM05D032673 ORTHO05D008837 5.9e-10 69.3 95 34.7
BolC6t35921H Brassica oleracea HOM05D000096 ORTHO05D008837 5.9e-10 69.3 173 26.0
BcaB01g01608 Brassica carinata HOM05D007011 ORTHO05D008837 1.1e-08 65.1 60 48.3
A02p25900 Brassica napus HOM05D007011 ORTHO05D042806 1.9e-08 64.3 68 48.5
Sp7g03840 Schrenkiella parvula HOM05D016270 ORTHO05D019360 1.9e-08 64.3 161 23.6


User provided reference genes

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