Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g27517 Brassica carinata HOM05D000135 ORTHO05D011359 1.2e-41 173.3 127 100.0
BraA05t20974Z Brassica rapa HOM05D000135 ORTHO05D011359 1.3e-32 143.3 134 85.8
BcaB02g11072 Brassica carinata HOM05D000135 ORTHO05D011359 6.0e-30 134.4 133 82.7
C05p34910 Brassica napus HOM05D000135 ORTHO05D011359 6.9e-26 120.9 63 98.4
BolC5t32216H Brassica oleracea HOM05D000135 ORTHO05D011359 4.5e-25 118.2 63 96.8
Sp1g33430 Schrenkiella parvula HOM05D000135 ORTHO05D011359 5.8e-25 117.9 133 63.9
Thhalv10012139m.g Eutrema salsugineum HOM05D000135 ORTHO05D011359 4.9e-24 114.8 111 71.2
A05p20660 Brassica napus HOM05D000135 ORTHO05D011359 2.1e-22 109.4 133 72.2
BcaB07g33677 Brassica carinata HOM05D000135 ORTHO05D011359 2.5e-20 102.4 132 55.3
BcaC08g43136 Brassica carinata HOM05D000135 ORTHO05D011359 2.5e-20 102.4 132 66.7
C06p04130 Brassica napus HOM05D000135 ORTHO05D011359 2.5e-20 102.4 132 66.7
A06p03870 Brassica napus HOM05D000135 ORTHO05D011359 3.3e-20 102.1 132 46.2
BraA06t23595Z Brassica rapa HOM05D000135 ORTHO05D011359 3.3e-20 102.1 132 46.2
BolC6t35541H Brassica oleracea HOM05D000135 ORTHO05D011359 1.3e-19 100.1 132 66.7
Thhalv10022182m.g Eutrema salsugineum HOM05D000135 ORTHO05D011359 8.2e-19 97.4 111 62.2
Carub.0003s0255 Capsella rubella HOM05D000135 ORTHO05D011359 1.0e-16 90.5 109 45.0
AL3G13080 Arabidopsis lyrata HOM05D000227 ORTHO05D011359 3.8e-16 88.6 111 42.3
AT3G03410 Arabidopsis thaliana HOM05D000135 ORTHO05D011359 6.1e-14 81.3 111 42.3
Sp3g02410 Schrenkiella parvula HOM05D000227 ORTHO05D011359 1.8e-13 79.7 108 54.6
C06p04190 Brassica napus HOM05D000135 ORTHO05D011359 1.8e-10 69.7 52 69.2
Carub.0004s1794 Capsella rubella HOM05D000135 ORTHO05D000203 6.9e-10 67.8 62 54.8
AL6G28550 Arabidopsis lyrata HOM05D000135 ORTHO05D000203 1.2e-09 67.0 62 54.8
AT5G17470 Arabidopsis thaliana HOM05D000135 ORTHO05D000203 2.0e-09 66.2 62 54.8
CARHR195730 Cardamine hirsuta HOM05D000135 ORTHO05D000203 2.0e-09 66.2 62 56.5
BraA03t12154Z Brassica rapa HOM05D017453 ORTHO05D018582 1.7e-08 63.2 61 47.5
AL4G32280 Arabidopsis lyrata HOM05D000135 ORTHO05D011359 3.8e-08 62.0 62 51.6
Sp3g02400 Schrenkiella parvula HOM05D000135 ORTHO05D000203 8.5e-08 60.8 118 30.5
AL3G13072 Arabidopsis lyrata HOM05D000135 ORTHO05D000203 4.2e-07 58.5 120 30.8
Carub.0006s1570 Capsella rubella HOM05D000135 ORTHO05D011359 4.2e-07 58.5 62 48.4
AT2G36180 Arabidopsis thaliana HOM05D000135 ORTHO05D000203 7.2e-07 57.8 58 51.7
Carub.0004s0480 Capsella rubella HOM05D000135 ORTHO05D000203 9.4e-07 57.4 62 48.4
BcaC05g30534 Brassica carinata HOM05D000135 ORTHO05D011359 1.2e-06 57.0 62 43.5
CARHR077420 Cardamine hirsuta HOM05D000135 ORTHO05D000203 1.2e-06 57.0 118 29.7
BcaC09g47744 Brassica carinata HOM05D000135 ORTHO05D011359 3.6e-06 55.5 62 45.2
BNapus_Darmor_BZH_scaffold_162p00140 Brassica napus HOM05D000135 ORTHO05D011359 3.6e-06 55.5 62 45.2
BolC1t05833H Brassica oleracea HOM05D000135 ORTHO05D011359 3.6e-06 55.5 62 45.2
CARHR058370 Cardamine hirsuta HOM05D000135 ORTHO05D000203 3.6e-06 55.5 60 41.7
Thhalv10022417m.g Eutrema salsugineum HOM05D000135 ORTHO05D000203 3.6e-06 55.5 57 49.1
BcaC05g30277 Brassica carinata HOM05D000135 ORTHO05D011359 4.7e-06 55.1 62 43.5
C05p63420 Brassica napus HOM05D000227 ORTHO05D011359 4.7e-06 55.1 60 43.3
AL7G46640 Arabidopsis lyrata HOM05D000135 ORTHO05D000203 7.9e-06 54.3 116 27.6
AT3G03400 Arabidopsis thaliana HOM05D000135 ORTHO05D011359 7.9e-06 54.3 120 28.3


User provided reference genes

Program Settings