Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g27433 Brassica carinata HOM05D006121 ORTHO05D009559 3.2e-276 954.5 496 100.0
BcaC06g36507 Brassica carinata HOM05D006121 ORTHO05D009559 1.1e-212 743.4 496 81.9
BcaC03g17371 Brassica carinata HOM05D006121 ORTHO05D009559 2.0e-201 706.1 506 78.9
BcaC01g02238 Brassica carinata HOM05D006121 ORTHO05D009559 8.6e-149 531.2 495 61.2
BcaC04g23210 Brassica carinata HOM05D006121 ORTHO05D009559 1.9e-140 503.4 504 58.7
BcaC03g16371 Brassica carinata HOM05D006121 ORTHO05D009559 2.8e-131 473.0 458 61.8
BcaC04g23066 Brassica carinata HOM05D006121 ORTHO05D009559 2.9e-128 463.0 479 57.6
BcaC03g16227 Brassica carinata HOM05D006121 ORTHO05D009559 7.9e-126 454.9 505 55.2
BcaC07g37903 Brassica carinata HOM05D006121 ORTHO05D009559 6.9e-122 441.8 527 53.3
BcaC01g05819 Brassica carinata HOM05D006121 ORTHO05D009559 1.7e-120 437.2 508 53.3
BcaC07g37897 Brassica carinata HOM05D006121 ORTHO05D009559 2.1e-118 430.3 507 52.3
BcaC04g20762 Brassica carinata HOM05D006121 ORTHO05D009559 3.7e-115 419.5 505 51.7
BraA09t38607Z Brassica rapa HOM05D006121 ORTHO05D009559 9.3e-111 404.8 469 51.6
BcaC03g15130 Brassica carinata HOM05D006121 ORTHO05D009559 1.6e-110 404.1 516 49.8
BcaC06g35988 Brassica carinata HOM05D006121 ORTHO05D009559 2.5e-87 327.0 369 56.1
BcaC04g20594 Brassica carinata HOM05D006121 ORTHO05D009559 1.5e-60 238.0 360 43.3
BcaC09g49541 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-59 235.0 184 79.3
BcaC08g45230 Brassica carinata HOM05D006121 ORTHO05D002427 4.7e-54 216.5 331 43.8
BraA06t25079Z Brassica rapa HOM05D006121 ORTHO05D009559 1.4e-53 214.9 176 63.1
BcaC09g49299 Brassica carinata HOM05D006121 ORTHO05D009559 5.2e-53 213.0 505 33.7
Carub.0003s2904 Capsella rubella HOM05D006121 ORTHO05D009559 9.8e-52 208.8 582 30.4
BcaC01g06835 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-51 208.4 529 32.5
BcaC02g11248 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-51 208.4 516 32.4
BcaC02g11960 Brassica carinata HOM05D006121 ORTHO05D009559 4.6e-49 199.9 529 31.6
BolC9t56759H Brassica oleracea HOM05D006121 ORTHO05D009559 2.9e-43 180.6 156 62.2
BcaC08g42951 Brassica carinata HOM05D006121 ORTHO05D009559 1.1e-42 178.7 183 47.5
BcaC01g02132 Brassica carinata HOM05D006121 ORTHO05D009559 3.5e-41 173.7 181 48.1
BcaC05g27793 Brassica carinata HOM05D006121 ORTHO05D009559 3.0e-40 170.6 181 46.4
BolC7t41498H Brassica oleracea HOM05D006121 ORTHO05D009559 9.5e-39 165.6 125 64.8
BcaC05g27675 Brassica carinata HOM05D006121 ORTHO05D009559 1.1e-37 162.2 182 44.0
BcaC03g16521 Brassica carinata HOM05D006121 ORTHO05D009559 1.2e-36 158.7 185 43.8
BcaC07g37147 Brassica carinata HOM05D006121 ORTHO05D009559 1.5e-36 158.3 244 37.3
BcaC09g49745 Brassica carinata HOM05D006121 ORTHO05D009559 3.4e-36 157.1 168 47.0
BcaC08g44795 Brassica carinata HOM05D006121 ORTHO05D027423 1.7e-35 154.8 135 68.1
BcaC08g43580 Brassica carinata HOM05D006121 ORTHO05D009559 8.4e-35 152.5 462 29.7
BcaC09g49729 Brassica carinata HOM05D006121 ORTHO05D009559 7.8e-33 146.0 156 47.4
BcaC04g21502 Brassica carinata HOM05D006121 ORTHO05D009559 5.1e-32 143.3 166 45.8
BcaC04g20036 Brassica carinata HOM05D006121 ORTHO05D009559 8.7e-32 142.5 120 72.5
BcaC06g36167 Brassica carinata HOM05D006121 ORTHO05D009559 1.9e-31 141.4 470 29.8
BcaC05g28468 Brassica carinata HOM05D006121 ORTHO05D009559 6.2e-30 136.3 110 54.5
BcaC02g09767 Brassica carinata HOM05D006121 ORTHO05D009559 1.1e-29 135.6 224 36.2
BcaC03g16486 Brassica carinata HOM05D006121 ORTHO05D009559 1.4e-29 135.2 110 56.4
BcaC05g28043 Brassica carinata HOM05D006121 ORTHO05D009559 9.0e-29 132.5 110 53.6
BcaC06g35787 Brassica carinata HOM05D006121 ORTHO05D009559 3.8e-27 127.1 86 82.6
BcaB05g23675 Brassica carinata HOM05D006121 ORTHO05D016754 1.4e-26 125.2 233 41.6
BcaC04g20966 Brassica carinata HOM05D006121 ORTHO05D009559 3.9e-24 117.1 369 33.1
BcaC08g42838 Brassica carinata HOM05D006121 ORTHO05D009559 3.3e-23 114.0 92 53.3
BcaC05g27828 Brassica carinata HOM05D006121 ORTHO05D009559 5.6e-23 113.2 84 67.9
BcaC09g49792 Brassica carinata HOM05D006121 ORTHO05D009559 7.3e-23 112.8 119 57.1
BcaC03g16573 Brassica carinata HOM05D006121 ORTHO05D009559 4.8e-22 110.2 172 46.5
BolC3t20163H Brassica oleracea HOM05D006121 ORTHO05D009559 1.1e-21 109.0 422 28.0
BcaC01g00176 Brassica carinata HOM05D006121 ORTHO05D009559 4.5e-20 103.6 106 48.1
BcaC03g15823 Brassica carinata HOM05D006121 ORTHO05D009559 3.8e-19 100.5 113 41.6
BcaC09g50206 Brassica carinata HOM05D006121 ORTHO05D009559 4.9e-19 100.1 113 42.5
BolC9t58013H Brassica oleracea HOM05D006121 ORTHO05D009559 1.1e-18 99.0 112 48.2
BcaC06g34988 Brassica carinata HOM05D006121 ORTHO05D009559 7.1e-18 96.3 69 79.7
BcaB04g17962 Brassica carinata HOM05D006121 ORTHO05D009559 1.2e-17 95.5 89 55.1
Carub.0001s3399 Capsella rubella HOM05D008386 ORTHO05D010572 4.6e-17 93.6 537 23.5
C05p29190 Brassica napus HOM05D006121 ORTHO05D009559 1.3e-16 92.0 114 42.1
BcaC09g51377 Brassica carinata HOM05D006121 ORTHO05D009559 6.7e-16 89.7 106 56.6
BcaC04g20824 Brassica carinata HOM05D006121 ORTHO05D013509 1.9e-15 88.2 223 32.7
AL3G38160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.5e-15 87.8 135 33.3
AL1G50390 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 5.6e-15 86.7 323 27.2
AL8G33480 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 5.6e-15 86.7 135 32.6
BcaC02g10683 Brassica carinata HOM05D008386 ORTHO05D010572 5.6e-15 86.7 287 28.6
AL3G37710 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 7.4e-15 86.3 128 36.7
AT4G03830 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 7.4e-15 86.3 108 38.9
BcaC04g20823 Brassica carinata HOM05D006121 ORTHO05D009559 9.6e-15 85.9 79 51.9
AL4G14310 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.3e-14 85.5 120 35.8
AL8G45410 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.3e-14 85.5 214 30.4
BcaB02g06461 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-14 85.5 152 41.4
AL5G23160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.6e-14 85.1 121 37.2
BcaC06g33795 Brassica carinata HOM05D003421 ORTHO05D003268 1.6e-14 85.1 116 51.7
Carub.0007s3611 Capsella rubella HOM05D009492 ORTHO05D011693 1.6e-14 85.1 448 24.8
AL6G47370 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.1e-14 84.7 120 35.0
AL8G11870 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.1e-14 84.7 216 27.3
AL9U10230 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.1e-14 84.7 214 29.9
BcaC01g02130 Brassica carinata HOM05D008386 ORTHO05D010572 2.1e-14 84.7 289 29.4
AL1G57330 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.8e-14 84.3 216 27.3
AL4G24140 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.8e-14 84.3 214 30.4
BcaB08g35499 Brassica carinata HOM05D008386 ORTHO05D010572 2.8e-14 84.3 204 34.3
BcaC01g02131 Brassica carinata HOM05D006121 ORTHO05D013509 2.8e-14 84.3 223 33.6
AL1G65160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.7e-14 84.0 214 29.4
AL2G18400 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.7e-14 84.0 218 27.5
AL8G20450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.7e-14 84.0 214 29.4
AL2G23360 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.8e-14 83.6 214 29.9
AL6G42690 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 8.1e-14 82.8 214 29.9
BcaC05g26479 Brassica carinata HOM05D008386 ORTHO05D010572 8.1e-14 82.8 201 31.8
BcaC03g15124 Brassica carinata HOM05D008386 ORTHO05D010572 1.1e-13 82.4 124 41.1
AL1G47450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.4e-13 82.0 214 29.4
AL1G61970 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.8e-13 81.6 216 29.6
AL5G12240 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.4e-13 81.3 214 29.4
AT1G51172 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 6.9e-13 79.7 102 37.3
BcaNung03347 Brassica carinata HOM05D006121 ORTHO05D009559 6.9e-13 79.7 62 72.6
Carub.0002s0916 Capsella rubella HOM05D009492 ORTHO05D011693 1.2e-12 79.0 455 23.1
BcaC01g01840 Brassica carinata HOM05D008386 ORTHO05D010572 1.5e-12 78.6 164 33.5
BcaC08g44457 Brassica carinata HOM05D006121 ORTHO05D009559 1.5e-12 78.6 106 43.4
BolC4t24012H Brassica oleracea HOM05D006121 ORTHO05D009559 2.0e-12 78.2 42 88.1
BcaC04g21234 Brassica carinata HOM05D008386 ORTHO05D010572 2.6e-12 77.8 313 27.5
BcaC02g10386 Brassica carinata HOM05D008386 ORTHO05D010572 3.4e-12 77.4 256 30.5
AL2G23320 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 5.8e-12 76.6 107 35.5
Carub.0006s2644 Capsella rubella HOM05D009492 ORTHO05D011693 5.8e-12 76.6 194 29.9
Carub.0007s3731 Capsella rubella HOM05D009492 ORTHO05D011693 5.8e-12 76.6 208 29.8
AL4G17450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 7.6e-12 76.3 169 34.3
BcaC08g43032 Brassica carinata HOM05D006121 ORTHO05D009559 7.6e-12 76.3 268 28.0
AL6G45550 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 9.9e-12 75.9 109 34.9
AT5G32590 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 9.9e-12 75.9 136 30.9
Carub.0008s0728 Capsella rubella HOM05D009492 ORTHO05D011693 1.7e-11 75.1 500 23.0
BcaC06g35840 Brassica carinata HOM05D006121 ORTHO05D013509 2.2e-11 74.7 223 31.8
BcaC03g15126 Brassica carinata HOM05D006121 ORTHO05D009559 4.9e-11 73.6 78 46.2
BcaC08g44150 Brassica carinata HOM05D006121 ORTHO05D009559 3.2e-10 70.9 73 57.5
BcaC09g49551 Brassica carinata HOM05D008386 ORTHO05D010572 3.2e-10 70.9 290 28.3
BcaB04g18086 Brassica carinata HOM05D008386 ORTHO05D010572 5.5e-10 70.1 220 31.8
BcaC08g42828 Brassica carinata HOM05D008386 ORTHO05D010572 5.5e-10 70.1 296 26.4
BraA05t21496Z Brassica rapa HOM05D000633 ORTHO05D000477 5.5e-10 70.1 338 26.0
Carub.0002s0975 Capsella rubella HOM05D009492 ORTHO05D011693 9.3e-10 69.3 108 32.4
Carub.0002s0942 Capsella rubella HOM05D009492 ORTHO05D011693 1.2e-09 68.9 110 31.8
Sp6g07550 Schrenkiella parvula HOM05D010772 ORTHO05D005680 1.2e-09 68.9 103 34.0
BcaB08g35205 Brassica carinata HOM05D008386 ORTHO05D010572 1.6e-09 68.6 229 31.0
BcaC03g15125 Brassica carinata HOM05D006121 ORTHO05D009559 1.6e-09 68.6 261 26.1
Carub.0003s2742 Capsella rubella HOM05D009492 ORTHO05D011693 1.6e-09 68.6 428 22.9
CARHR174650 Cardamine hirsuta HOM05D008458 ORTHO05D010628 1.6e-09 68.6 187 28.9
BcaC02g10895 Brassica carinata HOM05D006121 ORTHO05D013509 2.7e-09 67.8 188 31.4
CARHR115630 Cardamine hirsuta HOM05D008458 ORTHO05D010628 2.7e-09 67.8 103 35.9
CARHR119450 Cardamine hirsuta HOM05D006121 ORTHO05D043487 4.6e-09 67.0 85 40.0
BcaC03g16668 Brassica carinata HOM05D006121 ORTHO05D009559 6.0e-09 66.6 94 39.4
BcaC04g23560 Brassica carinata HOM05D006121 ORTHO05D013509 7.9e-09 66.2 223 30.5
BolC7t41205H Brassica oleracea HOM05D006121 ORTHO05D013509 1.0e-08 65.9 463 24.0
Sp4g11160 Schrenkiella parvula HOM05D010772 ORTHO05D005680 1.3e-08 65.5 108 33.3
Sp4g04860 Schrenkiella parvula HOM05D010772 ORTHO05D005680 1.8e-08 65.1 127 31.5
BcaC06g35841 Brassica carinata HOM05D006121 ORTHO05D009559 6.7e-08 63.2 57 50.9
Carub.0005s0956 Capsella rubella HOM05D009492 ORTHO05D011693 1.5e-07 62.0 520 22.9
Aa31sc374G10 Aethionema arabicum HOM05D028239 ORTHO05D038176 1.9e-07 61.6 99 35.4
Carub.0006s2663 Capsella rubella HOM05D009492 ORTHO05D011693 2.5e-07 61.2 105 32.4
Carub.0007s2123 Capsella rubella HOM05D010629 ORTHO05D005680 2.5e-07 61.2 126 34.1
BcaC08g44151 Brassica carinata HOM05D006121 ORTHO05D009559 3.3e-07 60.8 87 46.0
BraA06t25464Z Brassica rapa HOM05D008596 ORTHO05D003268 4.3e-07 60.5 186 24.7
BcaC07g37265 Brassica carinata HOM05D006121 ORTHO05D009559 5.6e-07 60.1 57 50.9
BcaC03g16667 Brassica carinata HOM05D006121 ORTHO05D009559 7.4e-07 59.7 218 28.0
BcaC04g20778 Brassica carinata HOM05D008386 ORTHO05D010572 7.4e-07 59.7 314 27.7
Carub.0002s1244 Capsella rubella HOM05D010629 ORTHO05D005680 7.4e-07 59.7 126 33.3
BcaC01g02164 Brassica carinata HOM05D008386 ORTHO05D010572 9.6e-07 59.3 204 31.4
Carub.0006s0276 Capsella rubella HOM05D010629 ORTHO05D005680 9.6e-07 59.3 126 33.3
CARHR184520 Cardamine hirsuta HOM05D008458 ORTHO05D010628 9.6e-07 59.3 103 34.0
BcaC04g22047 Brassica carinata HOM05D006121 ORTHO05D009559 1.3e-06 58.9 138 30.4
Carub.0353s0001 Capsella rubella HOM05D010629 ORTHO05D005680 2.1e-06 58.2 126 32.5
Carub.0007s3212 Capsella rubella HOM05D009492 ORTHO05D011693 2.8e-06 57.8 488 21.3
A05p23070 Brassica napus HOM05D008596 ORTHO05D003268 3.7e-06 57.4 163 24.5
AT1G46696 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 4.8e-06 57.0 104 29.8
Carub.0005s0210 Capsella rubella HOM05D010629 ORTHO05D005680 4.8e-06 57.0 126 31.7
AT2G15110 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 8.2e-06 56.2 66 34.8


User provided reference genes

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