Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g27130 Brassica carinata HOM05D004432 ORTHO05D005427 2.3e-169 599.0 345 100.0
C05p30150 Brassica napus HOM05D004432 ORTHO05D005427 2.3e-169 599.0 345 100.0
BolC5t31752H Brassica oleracea HOM05D004432 ORTHO05D005427 1.2e-168 596.7 345 98.8
BraA09t39051Z Brassica rapa HOM05D004432 ORTHO05D005427 1.0e-156 557.0 345 93.3
BcaB07g32757 Brassica carinata HOM05D004432 ORTHO05D005427 1.2e-152 543.5 361 83.4
A09p35240 Brassica napus HOM05D004432 ORTHO05D005427 8.1e-146 520.8 324 94.1
BcaB04g18194 Brassica carinata HOM05D004432 ORTHO05D005427 6.9e-137 491.1 351 78.1
BcaC07g37789 Brassica carinata HOM05D004432 ORTHO05D005427 3.5e-133 478.8 356 75.8
Thhalv10008022m.g Eutrema salsugineum HOM05D004432 ORTHO05D005427 1.5e-131 473.4 364 76.6
AT1G30970 Arabidopsis thaliana HOM05D004432 ORTHO05D005427 4.3e-131 471.9 369 70.7
Carub.0001s2938 Capsella rubella HOM05D004432 ORTHO05D005427 7.4e-131 471.1 368 72.6
Sp1g26830 Schrenkiella parvula HOM05D004432 ORTHO05D005427 7.9e-125 451.1 342 77.2
AL1G45380 Arabidopsis lyrata HOM05D004432 ORTHO05D005427 2.2e-122 443.0 348 70.1
BolC8t48181H Brassica oleracea HOM05D004432 ORTHO05D005427 1.4e-121 440.3 335 74.0
Aa31LG6G12370 Aethionema arabicum HOM05D004432 ORTHO05D005427 1.7e-119 433.3 346 71.4
A08p10850 Brassica napus HOM05D004432 ORTHO05D005427 6.5e-119 431.4 336 69.9
BraA08t33081Z Brassica rapa HOM05D004432 ORTHO05D005427 3.4e-112 409.1 336 72.9
Thecc.02G004200 Theobroma cacao HOM05D004432 ORTHO05D005427 4.5e-104 382.1 372 60.5
Atru.chr10.352 Acer truncatum HOM05D004432 ORTHO05D005427 1.8e-100 370.2 375 59.7
MD05G1247000 Malus domestica HOM05D004432 ORTHO05D005427 2.3e-100 369.8 361 59.6
Gohir.A12G049500 Gossypium hirsutum HOM05D004432 ORTHO05D005427 5.2e-100 368.6 365 63.3
Gohir.D12G047900 Gossypium hirsutum HOM05D004432 ORTHO05D005427 5.2e-100 368.6 365 63.0
Manes.03G075400 Manihot esculenta HOM05D004432 ORTHO05D005427 2.0e-99 366.7 375 64.8
PGSC0003DMG401017733 Solanum tuberosum HOM05D004432 ORTHO05D005427 2.2e-98 363.2 372 58.9
COL.COLO4_18029 Corchorus olitorius HOM05D004432 ORTHO05D003521 5.3e-97 358.6 370 58.9
SalBow8G1652 Salvia bowleyana HOM05D004432 ORTHO05D005427 1.2e-96 357.5 391 59.8
THA.LOC104798567 Tarenaya hassleriana HOM05D004432 ORTHO05D005427 1.6e-96 357.1 354 61.3
MD10G1227600 Malus domestica HOM05D004432 ORTHO05D005427 4.5e-96 355.5 362 58.3
CsaV3_6G052770 Cucumis sativus L. HOM05D004432 ORTHO05D005427 1.3e-95 354.0 378 57.1
TWI63G0296 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 1.3e-95 354.0 380 59.7
RcHm_v2.0_Chr5g0021051 Rosa chinensis HOM05D004432 ORTHO05D005427 2.2e-95 353.2 375 57.9
CANSAT35G1493 Cannabis sativa HOM05D004432 ORTHO05D005427 3.8e-95 352.4 366 60.7
FvH4_3g12940 Fragaria vesca HOM05D004432 ORTHO05D005427 1.1e-94 350.9 386 55.7
FAN25G3492 Fragaria x ananassa HOM05D004432 ORTHO05D005427 1.1e-94 350.9 386 55.7
FAN21G3105 Fragaria x ananassa HOM05D004432 ORTHO05D005427 3.2e-94 349.4 386 55.7
Peaxi162Scf00048g01413 Petunia axillaris HOM05D004432 ORTHO05D005427 3.2e-94 349.4 368 60.9
FAN16G2829 Fragaria x ananassa HOM05D004432 ORTHO05D005427 5.5e-94 348.6 386 55.4
Solyc02g081620.3 Solanum lycopersicum HOM05D004432 ORTHO05D005427 1.2e-93 347.4 371 57.7
Dinv31191 Davidia involucrata HOM05D004432 ORTHO05D005427 1.6e-93 347.1 380 58.4
Sed0004537 Sechium edule HOM05D004432 ORTHO05D005427 4.7e-93 345.5 380 57.4
Hma1.2p1_0088F.1_g045180 Hydrangea macrophylla HOM05D004432 ORTHO05D005427 1.0e-92 344.4 376 58.2
TWI15G0381 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 1.4e-92 344.0 381 58.5
Phvul.002G325100 Phaseolus vulgaris HOM05D004432 ORTHO05D005427 3.0e-92 342.8 372 55.1
CSS0030674 Camellia sinensis var. sinensis HOM05D004432 ORTHO05D005427 5.2e-92 342.0 377 59.4
Duzib248G0466 Durio zibethinus HOM05D004432 ORTHO05D005427 8.8e-92 341.3 391 56.8
Eucgr.E04313 Eucalyptus grandis HOM05D004432 ORTHO05D005427 8.8e-92 341.3 370 63.0
Sabra03G0044900 Salix brachista HOM05D004432 ORTHO05D005427 8.8e-92 341.3 382 56.8
TPR.G12851 Trifolium pratense HOM05D004432 ORTHO05D005427 1.5e-91 340.5 395 59.0
ECA232G3357 Erigeron canadensis HOM05D004432 ORTHO05D005427 3.4e-91 339.3 371 56.6
Prupe.4G117400 Prunus persica HOM05D004432 ORTHO05D005427 3.4e-91 339.3 367 63.2
unitig_748.g7489 Utricularia gibba HOM05D004432 ORTHO05D005427 7.5e-91 338.2 376 56.9
Lalb_Chr05g0222011 Lupinus albus HOM05D004432 ORTHO05D005427 1.3e-90 337.4 377 61.8
Atru.chr8.662 Acer truncatum HOM05D004432 ORTHO05D005427 2.2e-90 336.7 357 57.1
MBI18_g00544_MAGBIO Magnolia biondii HOM05D004432 ORTHO05D005427 2.2e-90 336.7 376 57.4
GSVIVG01012145001 Vitis vinifera HOM05D004432 ORTHO05D005427 2.8e-90 336.3 383 56.1
CSS0046356 Camellia sinensis var. sinensis HOM05D004432 ORTHO05D005427 3.7e-90 335.9 384 56.8
Glyma.05G241800 Glycine max HOM05D004432 ORTHO05D005427 3.7e-90 335.9 374 61.2
ClCG01G025530 Citrullus lanatus HOM05D004432 ORTHO05D005427 6.3e-90 335.1 426 51.6
Peaxi162Scf00198g01525 Petunia axillaris HOM05D004432 ORTHO05D005427 6.3e-90 335.1 378 59.0
PGR042G3514 Punica granatum HOM05D004432 ORTHO05D005427 6.3e-90 335.1 376 54.3
TWI34G0639 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 8.3e-90 334.7 391 54.7
SGA_v2.0_scaffold298G47706 Striga asiatica HOM05D004432 ORTHO05D005427 1.1e-89 334.3 383 58.0
PSO541G2602 Papaver somniferum HOM05D004432 ORTHO05D005427 1.8e-89 333.6 383 56.1
Dinv05655 Davidia involucrata HOM05D004432 ORTHO05D005427 2.4e-89 333.2 374 64.7
VMungo0251G3730 Vigna mungo HOM05D004432 ORTHO05D005427 2.4e-89 333.2 384 57.8
EL10Ac6g15345 Beta vulgaris HOM05D004432 ORTHO05D005427 3.1e-89 332.8 377 63.1
CAN.G809.71 Capsicum annuum HOM05D004432 ORTHO05D005427 5.4e-89 332.0 384 57.6
Lj1A1149G74 Lonicera japonica HOM05D004432 ORTHO05D005427 7.0e-89 331.6 416 52.2
Gorai.008G050900 Gossypium raimondii HOM05D004432 ORTHO05D005427 9.1e-89 331.3 341 61.0
HanXRQChr09g0257831 Helianthus annuus HOM05D004432 ORTHO05D005427 2.7e-88 329.7 368 59.5
Cc09_g05240 Coffea canephora HOM05D004432 ORTHO05D005427 1.3e-87 327.4 359 54.9
Ciclev10015448m.g Citrus clementina HOM05D004432 ORTHO05D005427 3.8e-87 325.9 359 55.4
Migut.M02008 Erythranthe guttata HOM05D004432 ORTHO05D005427 4.2e-86 322.4 380 55.8
Sopen02g010370 Solanum pennellii HOM05D004432 ORTHO05D005427 5.5e-86 322.0 372 57.5
CiPaw.10G104800 Carya illinoinensis HOM05D004432 ORTHO05D005427 9.5e-86 321.2 357 54.9
Actinidia33704 Actinidia chinensis HOM05D004432 ORTHO05D005427 1.2e-85 320.9 350 54.6
GSVIVG01015880001 Vitis vinifera HOM05D004432 ORTHO05D005427 1.6e-85 320.5 374 52.9
Solyc02g032120.3 Solanum lycopersicum HOM05D004432 ORTHO05D005427 2.1e-85 320.1 372 57.5
MELO3C007033.2 Cucumis melo HOM05D004432 ORTHO05D005427 2.8e-85 319.7 356 56.2
Glyma.08G049300 Glycine max HOM05D004432 ORTHO05D005427 6.1e-85 318.5 363 58.1
FAN11G2748 Fragaria x ananassa HOM05D004432 ORTHO05D005427 1.8e-84 317.0 362 53.9
AUR62017849 Chenopodium quinoa HOM05D004432 ORTHO05D005427 3.0e-84 316.2 413 56.9
Duzib132G0752 Durio zibethinus HOM05D004432 ORTHO05D005427 6.8e-84 315.1 349 58.7
Sabra01G0131600 Salix brachista HOM05D004432 ORTHO05D005427 8.8e-84 314.7 372 59.1
Lsat_1_v5_gn_8_106840 Lactuca sativa HOM05D004432 ORTHO05D005427 2.0e-83 313.5 372 55.6
Sopen02g026240 Solanum pennellii HOM05D004432 ORTHO05D005427 2.0e-83 313.5 349 55.6
Oeu056059.4 Olea europaea HOM05D004432 ORTHO05D005427 2.6e-83 313.2 418 51.0
DCAR_003760 Daucus carota HOM05D004432 ORTHO05D005427 4.4e-83 312.4 359 54.0
arahy.Tifrunner.gnm1.ann1.GLQ3B3 Arachis hypogaea HOM05D004432 ORTHO05D005427 5.7e-83 312.0 368 59.8
ATR0568G227 Amborella trichopoda HOM05D004432 ORTHO05D005427 7.5e-83 311.6 390 54.9
Nitab4.5_0006794g0040 Nicotiana tabacum HOM05D004432 ORTHO05D005427 9.8e-83 311.2 350 54.0
arahy.Tifrunner.gnm1.ann1.AGE02H Arachis hypogaea HOM05D004432 ORTHO05D005427 1.7e-82 310.5 368 59.5
Lalb_Chr10g0095541 Lupinus albus HOM05D004432 ORTHO05D005427 8.3e-82 308.1 376 61.4
SGA_v2.0_scaffold175G39329 Striga asiatica HOM05D004432 ORTHO05D005427 8.3e-82 308.1 446 46.2
Nitab4.5_0010401g0010 Nicotiana tabacum HOM05D004432 ORTHO05D005427 1.8e-81 307.0 352 56.2
Potri.001G160700 Populus trichocarpa HOM05D004432 ORTHO05D005427 4.1e-81 305.8 352 54.0
TWI15G1036 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 5.4e-81 305.4 371 52.6
Oeu018409.2 Olea europaea HOM05D004432 ORTHO05D005427 1.2e-80 304.3 428 51.2
Cpa.g.sc30.114 Carica papaya HOM05D004432 ORTHO05D005427 4.5e-80 302.4 356 55.6
TAR624G0396 Trochodendron aralioides HOM05D004432 ORTHO05D005427 4.5e-80 302.4 381 50.4
Medtr8g106220 Medicago truncatula HOM05D004432 ORTHO05D005427 1.7e-79 300.4 370 57.6
Actinidia22430 Actinidia chinensis HOM05D004432 ORTHO05D005427 5.0e-79 298.9 354 55.6
Nn7g38330 Nelumbo nucifera HOM05D004432 ORTHO05D005427 5.0e-79 298.9 358 55.3
Ca_17239_v3 Cicer arietinum L. HOM05D004432 ORTHO05D005427 6.6e-79 298.5 370 56.8
Os09g0560900 Oryza sativa ssp. japonica HOM05D004432 ORTHO05D005427 6.6e-79 298.5 360 53.1
HPP92_006155 Vanilla planifolia HOM05D004432 ORTHO05D005427 6.6e-79 298.5 334 53.9
MSTRG.16369 Avicennia marina HOM05D004432 ORTHO05D005427 2.5e-78 296.6 354 60.7
Lj4g0008002 Lotus japonicus HOM05D004432 ORTHO05D005427 2.5e-78 296.6 360 58.9
PSO675G3183 Papaver somniferum HOM05D004432 ORTHO05D005427 3.3e-78 296.2 352 53.1
Psat7g005440 Pisum sativum HOM05D004432 ORTHO05D005427 3.3e-78 296.2 354 57.6
AUR62003535 Chenopodium quinoa HOM05D004432 ORTHO05D005427 7.3e-78 295.0 352 60.5
Lalb_Chr09g0330711 Lupinus albus HOM05D004432 ORTHO05D005427 1.8e-76 290.4 376 55.1
HPP92_024334 Vanilla planifolia HOM05D004432 ORTHO05D005427 2.3e-76 290.0 337 55.2
Sc16g0004480 Simmondsia chinensis HOM05D004432 ORTHO05D005427 9.8e-75 284.6 357 57.7
Aqoxy1G01396 Aquilegia oxysepala HOM05D004432 ORTHO05D005427 3.7e-74 282.7 357 54.1
SEGI_00495 Sequoiadendron giganteum HOM05D004432 ORTHO05D005427 6.4e-74 282.0 393 54.2
Hund04373 Selenicereus undatus HOM05D004432 ORTHO05D005427 1.8e-73 280.4 498 47.6
Mapoly0070s0095 Marchantia polymorpha HOM05D004432 ORTHO05D005427 1.3e-71 274.2 403 50.6
Ah.03g147620 Amaranthus hybridus HOM05D004432 ORTHO05D005427 9.8e-67 258.1 341 49.9
Pp3c22_1400 Physcomitrium patens HOM05D004432 ORTHO05D005427 1.7e-63 247.3 410 50.2
AagrBONN_evm.TU.Sc2ySwM_344.4234 Anthoceros agrestis HOM05D004432 ORTHO05D005427 2.3e-63 246.9 404 47.8
CDE01G0579 Ceratophyllum demersum HOM05D007061 ORTHO05D009017 1.2e-59 234.6 321 49.2
vmacro03556 Vaccinium macrocarpon HOM05D004432 ORTHO05D005427 3.7e-58 229.6 479 40.7
TWI32G0924 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 1.4e-57 227.6 323 51.7
QL11p012272 Quercus lobata HOM05D004432 ORTHO05D005427 4.6e-56 222.6 284 51.8
SMO239G0124 Selaginella moellendorffii HOM05D004432 ORTHO05D005427 3.9e-55 219.5 348 44.8
Cfa001128 Carpinus fangiana HOM05D004432 ORTHO05D005427 1.9e-54 217.2 329 50.5
CiPaw.09G137500 Carya illinoinensis HOM05D004432 ORTHO05D005427 9.5e-54 214.9 165 66.7
Potri.003G074200 Populus trichocarpa HOM05D004432 ORTHO05D005427 1.2e-53 214.5 283 54.4
Haze_05262 Corylus avellana HOM05D004432 ORTHO05D005427 3.9e-47 193.0 98 89.8
SEGI_03989 Sequoiadendron giganteum HOM05D004432 ORTHO05D005427 3.3e-46 189.9 159 62.3
TAR629G1033 Trochodendron aralioides HOM05D004432 ORTHO05D005427 4.3e-46 189.5 285 48.8
CBR_g1074 Chara braunii HOM05D004432 ORTHO05D005427 7.3e-46 188.7 134 70.1
Rhsim13G0133700 Rhododendron simsii HOM05D004432 ORTHO05D005427 1.6e-45 187.6 99 88.9
RhsimUnG0176700 Rhododendron simsii HOM05D004432 ORTHO05D005427 1.6e-45 187.6 99 88.9
CARHR030510 Cardamine hirsuta HOM05D004432 ORTHO05D005427 1.9e-41 174.1 207 57.0
Dinv23014 Davidia involucrata HOM05D004432 ORTHO05D005427 1.7e-39 167.5 93 86.0
Zm00001eb104750 Zea mays HOM05D004432 ORTHO05D005427 8.1e-37 158.7 288 43.8
Rhsim13G0133800 Rhododendron simsii HOM05D004432 ORTHO05D005427 2.0e-35 154.1 303 43.2
RhsimUnG0176800 Rhododendron simsii HOM05D004432 ORTHO05D005427 2.0e-35 154.1 303 43.2
CiPaw.09G137600 Carya illinoinensis HOM05D004432 ORTHO05D005427 7.1e-33 145.6 183 53.0
Dinv23013 Davidia involucrata HOM05D004432 ORTHO05D005427 1.6e-32 144.4 255 44.3
SEGI_09071 Sequoiadendron giganteum HOM05D004432 ORTHO05D005427 2.8e-29 133.7 87 79.3
SHI20754 Sapria himalayana HOM05D000030 ORTHO05D000009 2.6e-27 127.1 132 53.0
Haze_05275 Corylus avellana HOM05D004432 ORTHO05D005427 1.1e-25 121.7 277 41.2
Sopen12g027920 Solanum pennellii HOM05D004432 ORTHO05D005427 1.9e-25 120.9 70 77.1
Cre06.g305200 Chlamydomonas reinhardtii HOM05D004432 ORTHO05D005427 6.0e-24 115.9 94 56.4
MCO08G042 Micromonas commoda HOM05D004432 ORTHO05D005427 1.0e-23 115.2 89 65.2
GSVIVG01015874001 Vitis vinifera HOM05D004432 ORTHO05D005427 1.6e-21 107.8 65 78.5
Pp3c19_17160 Physcomitrium patens HOM05D004432 ORTHO05D005427 2.8e-21 107.1 126 54.0
Cfa025961 Carpinus fangiana HOM05D004432 ORTHO05D005427 1.4e-20 104.8 86 51.2
Aqoxy1G01395 Aquilegia oxysepala HOM05D004432 ORTHO05D005427 4.5e-19 99.8 335 30.7
Atru.chr10.360 Acer truncatum HOM05D004432 ORTHO05D005427 1.4e-17 94.7 181 44.2
Nitab4.5_0004903g0050 Nicotiana tabacum HOM05D004432 ORTHO05D005427 1.3e-13 81.6 105 51.4
CAN.G958.2 Capsicum annuum HOM05D004432 ORTHO05D005427 9.0e-12 75.5 75 53.3


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