Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g27010 Brassica carinata HOM05D004997 ORTHO05D005921 5.6e-57 224.2 122 100.0
C05p28750 Brassica napus HOM05D004997 ORTHO05D005921 2.4e-52 208.8 113 99.1
BolC5t31593H Brassica oleracea HOM05D004997 ORTHO05D005921 2.4e-52 208.8 113 99.1
BcaB07g32600 Brassica carinata HOM05D004997 ORTHO05D005921 2.0e-51 205.7 113 98.2
A09p36530 Brassica napus HOM05D004997 ORTHO05D005921 2.0e-51 205.7 113 98.2
BraA09t39174Z Brassica rapa HOM05D004997 ORTHO05D005921 2.0e-51 205.7 113 98.2
BcaC06g35482 Brassica carinata HOM05D004997 ORTHO05D005921 8.0e-48 193.7 112 90.2
BolC7t42045H Brassica oleracea HOM05D004997 ORTHO05D005921 8.0e-48 193.7 112 90.2
BcaB03g13847 Brassica carinata HOM05D004997 ORTHO05D005921 1.8e-47 192.6 112 90.2
A07p10100 Brassica napus HOM05D004997 ORTHO05D005921 1.5e-46 189.5 123 82.9
Sp1g25870 Schrenkiella parvula HOM05D004997 ORTHO05D005921 2.6e-46 188.7 113 88.5
BraA07t28803Z Brassica rapa HOM05D004997 ORTHO05D005921 7.5e-46 187.2 112 89.3
CARHR029400 Cardamine hirsuta HOM05D004997 ORTHO05D005921 1.3e-45 186.4 113 88.5
THA.LOC104814295 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 1.1e-44 183.3 113 86.7
Carub.0001s2824 Capsella rubella HOM05D004997 ORTHO05D005921 1.9e-44 182.6 113 85.8
THA.LOC104812669 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 1.9e-44 182.6 113 86.7
Thhalv10009093m.g Eutrema salsugineum HOM05D004997 ORTHO05D005921 5.4e-44 181.0 113 86.7
AL1G43880 Arabidopsis lyrata HOM05D004997 ORTHO05D005921 1.2e-43 179.9 113 84.1
Gohir.A10G040300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.6e-43 179.5 112 84.8
Actinidia07691 Actinidia chinensis HOM05D004997 ORTHO05D005921 2.7e-43 178.7 113 82.3
Eucgr.E02397 Eucalyptus grandis HOM05D004997 ORTHO05D005921 3.5e-43 178.3 113 82.3
PSO339G4484 Papaver somniferum HOM05D004997 ORTHO05D005921 3.5e-43 178.3 113 81.4
PSO384G3576 Papaver somniferum HOM05D004997 ORTHO05D005921 3.5e-43 178.3 113 81.4
Gorai.011G043400 Gossypium raimondii HOM05D004997 ORTHO05D005921 4.6e-43 177.9 112 83.9
Manes.11G058500 Manihot esculenta HOM05D004997 ORTHO05D005921 6.0e-43 177.6 113 80.5
Thecc.06G151500 Theobroma cacao HOM05D004997 ORTHO05D005921 7.8e-43 177.2 112 83.9
C07p15580 Brassica napus HOM05D004997 ORTHO05D005921 1.0e-42 176.8 112 85.7
Dinv32261 Davidia involucrata HOM05D004997 ORTHO05D005921 1.3e-42 176.4 113 80.5
Gohir.D05G151300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.3e-42 176.4 112 83.0
Gorai.009G155300 Gossypium raimondii HOM05D004997 ORTHO05D005921 1.3e-42 176.4 112 83.0
AT1G29990 Arabidopsis thaliana HOM05D004997 ORTHO05D005921 1.7e-42 176.0 111 83.8
Cfa000953 Carpinus fangiana HOM05D004997 ORTHO05D005921 1.7e-42 176.0 113 80.5
TPR.G13287 Trifolium pratense HOM05D004997 ORTHO05D005921 1.7e-42 176.0 118 77.1
CsaV3_1G032650 Cucumis sativus L. HOM05D004997 ORTHO05D005921 3.0e-42 175.3 120 76.7
Duzib192G0549 Durio zibethinus HOM05D004997 ORTHO05D005921 3.0e-42 175.3 113 84.1
Sed0006544 Sechium edule HOM05D004997 ORTHO05D005921 3.0e-42 175.3 113 80.5
Lj5g0010316 Lotus japonicus HOM05D004997 ORTHO05D005921 3.9e-42 174.9 111 81.1
Phvul.002G321900 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 3.9e-42 174.9 111 82.0
Atru.chr10.1243 Acer truncatum HOM05D004997 ORTHO05D005921 5.1e-42 174.5 113 82.3
CSS0020008 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 5.1e-42 174.5 113 79.6
Gohir.D10G041200 Gossypium hirsutum HOM05D004997 ORTHO05D005921 5.1e-42 174.5 112 83.0
Gohir.A05G148700 Gossypium hirsutum HOM05D004997 ORTHO05D005921 6.6e-42 174.1 112 83.0
CiPaw.10G092400 Carya illinoinensis HOM05D004997 ORTHO05D005921 8.6e-42 173.7 113 79.6
Lj4g0009583 Lotus japonicus HOM05D004997 ORTHO05D005921 8.6e-42 173.7 111 80.2
Solyc08g016420.3 Solanum lycopersicum HOM05D004997 ORTHO05D005921 8.6e-42 173.7 113 77.9
Sopen08g006800 Solanum pennellii HOM05D004997 ORTHO05D005921 8.6e-42 173.7 113 77.9
TWI38G0351 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 8.6e-42 173.7 113 81.4
Ah.09g232610 Amaranthus hybridus HOM05D000413 ORTHO05D000292 1.5e-41 172.9 111 80.2
MELO3C002717.2 Cucumis melo HOM05D004997 ORTHO05D005921 1.5e-41 172.9 113 77.9
Duzib235G0692 Durio zibethinus HOM05D004997 ORTHO05D005921 1.5e-41 172.9 111 83.8
MD05G1284500 Malus domestica HOM05D004997 ORTHO05D005921 1.9e-41 172.6 113 79.6
Psat2g084800 Pisum sativum HOM05D004997 ORTHO05D005921 1.9e-41 172.6 111 80.2
Medtr5g055650 Medicago truncatula HOM05D004997 ORTHO05D005921 2.5e-41 172.2 111 81.1
Potri.004G131900 Populus trichocarpa HOM05D004997 ORTHO05D005921 2.5e-41 172.2 113 79.6
Sed0005528 Sechium edule HOM05D004997 ORTHO05D005921 2.5e-41 172.2 113 78.8
VMungo0251G3606 Vigna mungo HOM05D004997 ORTHO05D005921 2.5e-41 172.2 111 80.2
MD10G1262900 Malus domestica HOM05D004997 ORTHO05D005921 3.3e-41 171.8 113 78.8
RcHm_v2.0_Chr5g0013981 Rosa chinensis HOM05D004997 ORTHO05D005921 3.3e-41 171.8 113 79.6
MSTRG.7483 Avicennia marina HOM05D004997 ORTHO05D005921 4.3e-41 171.4 108 80.6
CANSAT35G1260 Cannabis sativa HOM05D004997 ORTHO05D005921 4.3e-41 171.4 112 78.6
FAN11G3072 Fragaria x ananassa HOM05D004997 ORTHO05D005921 4.3e-41 171.4 112 80.4
CiPaw.09G124400 Carya illinoinensis HOM05D004997 ORTHO05D005921 5.6e-41 171.0 113 79.6
Ciclev10017164m.g Citrus clementina HOM05D004997 ORTHO05D005921 5.6e-41 171.0 113 79.6
unitig_32.g11442 Utricularia gibba HOM05D004997 ORTHO05D005921 5.6e-41 171.0 108 80.6
Glyma.08G046600 Glycine max HOM05D004997 ORTHO05D005921 7.3e-41 170.6 111 78.4
ECA233G0220 Erigeron canadensis HOM05D004997 ORTHO05D005921 9.5e-41 170.2 111 79.3
Glyma.12G006600 Glycine max HOM05D004997 ORTHO05D005921 9.5e-41 170.2 111 78.4
Gorai.002G185400 Gossypium raimondii HOM05D004997 ORTHO05D005921 9.5e-41 170.2 112 81.2
HanXRQChr01g0020611 Helianthus annuus HOM05D004997 ORTHO05D005921 9.5e-41 170.2 112 78.6
Lalb_Chr05g0222161 Lupinus albus HOM05D004997 ORTHO05D005921 9.5e-41 170.2 107 80.4
SGA_v2.0_scaffold1G00167 Striga asiatica HOM05D004997 ORTHO05D005921 9.5e-41 170.2 108 81.5
TAR626G0896 Trochodendron aralioides HOM05D004997 ORTHO05D005921 9.5e-41 170.2 113 77.0
FvH4_3g05660 Fragaria vesca HOM05D004997 ORTHO05D005921 1.2e-40 169.9 112 79.5
FAN21G2809 Fragaria x ananassa HOM05D004997 ORTHO05D005921 1.6e-40 169.5 113 78.8
HanXRQChr11g0340951 Helianthus annuus HOM05D004997 ORTHO05D005921 1.6e-40 169.5 108 80.6
Prupe.4G079900 Prunus persica HOM05D004997 ORTHO05D005921 2.1e-40 169.1 113 77.9
TWI38G1166 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 2.1e-40 169.1 108 82.4
Aqoxy3G00593 Aquilegia oxysepala HOM05D004997 ORTHO05D005921 3.6e-40 168.3 112 76.8
MSTRG.16239 Avicennia marina HOM05D004997 ORTHO05D005921 3.6e-40 168.3 108 79.6
Nn4g24866 Nelumbo nucifera HOM05D004997 ORTHO05D005921 3.6e-40 168.3 113 77.0
Migut.M00914 Erythranthe guttata HOM05D004997 ORTHO05D005921 4.7e-40 167.9 108 80.6
GSVIVG01021444001 Vitis vinifera HOM05D004997 ORTHO05D005921 4.7e-40 167.9 107 80.4
HPP92_006252 Vanilla planifolia HOM05D004997 ORTHO05D005921 1.2e-38 163.3 113 76.1
QL05p058391 Quercus lobata HOM05D004997 ORTHO05D005921 1.5e-38 162.9 138 65.9
arahy.Tifrunner.gnm1.ann1.06CE9J Arachis hypogaea HOM05D004997 ORTHO05D005921 3.4e-38 161.8 120 71.7
CAN.G134.135 Capsicum annuum HOM05D004997 ORTHO05D000105 3.4e-38 161.8 111 73.9
arahy.Tifrunner.gnm1.ann1.FF119L Arachis hypogaea HOM05D004997 ORTHO05D005921 9.9e-38 160.2 121 71.1
Gohir.D01G100600 Gossypium hirsutum HOM05D004997 ORTHO05D005921 9.9e-38 160.2 112 78.6
DCAR_027919 Daucus carota HOM05D000413 ORTHO05D000292 1.3e-37 159.8 122 71.3
PGR042G1500 Punica granatum HOM05D004997 ORTHO05D005921 1.3e-37 159.8 113 75.2
SGA_v2.0_scaffold333G48998 Striga asiatica HOM05D004997 ORTHO05D005921 1.7e-37 159.5 121 71.9
CAN.G134.136 Capsicum annuum HOM05D004997 ORTHO05D005921 4.9e-37 157.9 118 68.6
Os02g0246300 Oryza sativa ssp. japonica HOM05D004997 ORTHO05D005921 4.9e-37 157.9 112 72.3
Gorai.002G125400 Gossypium raimondii HOM05D004997 ORTHO05D005921 8.3e-37 157.1 112 76.8
CDE02G0055 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 1.1e-36 156.8 113 71.7
CDE09G0791 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 1.9e-36 156.0 113 70.8
FAN25G0101 Fragaria x ananassa HOM05D004997 ORTHO05D005921 1.2e-35 153.3 126 67.5
ATR0743G157 Amborella trichopoda HOM05D004997 ORTHO05D005921 2.7e-35 152.1 107 73.8
Oeu034156.1 Olea europaea HOM05D004997 ORTHO05D005921 2.7e-35 152.1 92 85.9
PGSC0003DMG400009647 Solanum tuberosum HOM05D004997 ORTHO05D005921 3.5e-35 151.8 92 84.8
ClCG03G007080 Citrullus lanatus HOM05D004997 ORTHO05D005921 7.8e-35 150.6 168 54.2
Oeu052376.1 Olea europaea HOM05D004997 ORTHO05D005921 7.8e-35 150.6 92 84.8
arahy.Tifrunner.gnm1.ann1.7IX92P Arachis hypogaea HOM05D004997 ORTHO05D005921 6.6e-34 147.5 91 83.5
EL10Ac8g19712 Beta vulgaris HOM05D004997 ORTHO05D005921 1.1e-33 146.7 91 82.4
SEGI_33388 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 1.1e-33 146.7 111 69.4
Dinv30737 Davidia involucrata HOM05D004997 ORTHO05D005921 3.3e-33 145.2 92 82.6
Sc17g0004940 Simmondsia chinensis HOM05D004997 ORTHO05D005921 3.3e-33 145.2 92 80.4
COL.COLO4_31081 Corchorus olitorius HOM05D004997 ORTHO05D005921 4.3e-33 144.8 87 87.4
QL06p022817 Quercus lobata HOM05D004997 ORTHO05D005921 4.3e-33 144.8 101 78.2
Lsat_1_v5_gn_1_91801 Lactuca sativa HOM05D004997 ORTHO05D005921 2.8e-32 142.1 88 81.8
vmacro04021 Vaccinium macrocarpon HOM05D004997 ORTHO05D005921 3.6e-32 141.7 87 83.9
MBI07_g26358_MAGBIO Magnolia biondii HOM05D004997 ORTHO05D005921 6.2e-32 141.0 90 78.9
Hund21531 Selenicereus undatus HOM05D004997 ORTHO05D005921 6.2e-32 141.0 101 73.3
SMO367G0874 Selaginella moellendorffii HOM05D004997 ORTHO05D005921 8.1e-32 140.6 108 66.7
CAN.G3523.1 Capsicum annuum HOM05D004997 ORTHO05D005921 3.1e-31 138.7 92 77.2
AUR62039776 Chenopodium quinoa HOM05D004997 ORTHO05D005921 5.2e-31 137.9 84 83.3
Pp3c22_1770 Physcomitrium patens HOM05D004997 ORTHO05D005921 5.2e-31 137.9 115 62.6
CSS0046404 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 6.8e-31 137.5 87 80.5
CAN.G134.137 Capsicum annuum HOM05D004997 ORTHO05D005921 8.9e-31 137.1 92 76.1
Rhsim13G0211800 Rhododendron simsii HOM05D004997 ORTHO05D005921 2.0e-30 136.0 86 81.4
Prupe.3G104900 Prunus persica HOM05D004997 ORTHO05D005921 4.4e-30 134.8 93 77.4
Aa31LG6G5670 Aethionema arabicum HOM05D004997 ORTHO05D005921 5.8e-30 134.4 115 67.8
Mapoly0006s0079 Marchantia polymorpha HOM05D004997 ORTHO05D005921 7.6e-30 134.0 108 64.8
FAN16G0953 Fragaria x ananassa HOM05D004997 ORTHO05D005921 9.9e-30 133.7 87 78.2
Zm00001eb238610 Zea mays HOM05D004997 ORTHO05D005921 4.9e-29 131.3 112 64.3
SEGI_19850 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 6.4e-29 131.0 90 76.7
AagrBONN_evm.TU.Sc2ySwM_344.2433 Anthoceros agrestis HOM05D004997 ORTHO05D005921 8.4e-29 130.6 113 59.3
Cc02_g37190 Coffea canephora HOM05D004997 ORTHO05D005921 1.9e-28 129.4 113 65.5
SalBow8G3614 Salvia bowleyana HOM05D004997 ORTHO05D005921 5.4e-28 127.9 98 71.4
Lsat_1_v5_gn_5_30841 Lactuca sativa HOM05D004997 ORTHO05D005921 3.3e-25 118.6 71 85.9
Nitab4.5_0000348g0240 Nicotiana tabacum HOM05D004997 ORTHO05D005921 3.3e-25 118.6 92 72.8
Nitab4.5_0010327g0020 Nicotiana tabacum HOM05D004997 ORTHO05D005921 5.6e-25 117.9 92 72.8
Actinidia39569 Actinidia chinensis HOM05D004997 ORTHO05D005921 2.8e-24 115.5 113 59.3
CDE02G2003 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 5.3e-23 111.3 88 69.3
Phvul.009G128800 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 9.0e-23 110.5 69 82.6
Peaxi162Scf01211g00142 Petunia axillaris HOM05D004997 ORTHO05D005921 5.8e-22 107.8 70 78.6
Gohir.D01G149300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 2.9e-21 105.5 77 75.3
Haze_05586 Corylus avellana HOM05D004997 ORTHO05D005921 1.1e-20 103.6 194 38.7
AUR62030207 Chenopodium quinoa HOM05D004997 ORTHO05D005921 2.1e-19 99.4 61 83.6
Sabra04G0085700 Salix brachista HOM05D004997 ORTHO05D005921 5.1e-18 94.7 63 76.2
PRCOL_00000028 Prasinoderma coloniale HOM05D004997 ORTHO05D005921 1.5e-17 93.2 104 49.0
Manes.09G021201 Manihot esculenta HOM05D004997 ORTHO05D005921 5.6e-17 91.3 111 50.5
Zm00001eb151600 Zea mays HOM05D000394 ORTHO05D016690 4.8e-16 88.2 64 70.3
Zm00001eb258640 Zea mays HOM05D004997 ORTHO05D005921 1.1e-15 87.0 64 68.8
Zm00001eb310800 Zea mays HOM05D000394 ORTHO05D016690 1.4e-15 86.7 64 68.8
Zm00001eb225310 Zea mays HOM05D000901 ORTHO05D005921 5.3e-15 84.7 71 62.0
Zm00001eb139040 Zea mays HOM05D000901 ORTHO05D005921 6.9e-15 84.3 74 60.8
MCO01G210 Micromonas commoda HOM05D004997 ORTHO05D005921 1.2e-14 83.6 113 42.5
Zm00001eb269380 Zea mays HOM05D000901 ORTHO05D005921 2.0e-14 82.8 65 66.2
Zm00001eb344510 Zea mays HOM05D000901 ORTHO05D000768 2.2e-13 79.3 65 63.1
Haze_05599 Corylus avellana HOM05D004997 ORTHO05D005921 4.9e-13 78.2 170 38.8
Cre12.g502750 Chlamydomonas reinhardtii HOM05D004997 ORTHO05D005921 1.6e-11 73.2 96 44.8
Cfa022129 Carpinus fangiana HOM05D004997 ORTHO05D005921 8.1e-08 60.8 117 32.5


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