Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g26903 Brassica carinata HOM05D010973 ORTHO05D014088 4.4e-78 294.7 160 100.0
BcaC06g34075 Brassica carinata HOM05D010973 ORTHO05D014088 8.9e-55 217.2 173 74.0
BolC7t43813H Brassica oleracea HOM05D010973 ORTHO05D014088 9.9e-54 213.8 176 72.2
BolC9t57788H Brassica oleracea HOM05D010973 ORTHO05D014088 3.7e-53 211.8 242 57.0
BolC5t31476H Brassica oleracea HOM05D010973 ORTHO05D014088 8.3e-53 210.7 175 72.6
C09p49360 Brassica napus HOM05D010973 ORTHO05D014088 1.1e-52 210.3 242 56.6
C05p27560 Brassica napus HOM05D010973 ORTHO05D014088 3.2e-52 208.8 166 74.1
BcaC03g13719 Brassica carinata HOM05D010973 ORTHO05D014088 7.1e-52 207.6 242 56.6
C02p31140 Brassica napus HOM05D010973 ORTHO05D014088 1.2e-46 190.3 246 53.7
BcaC07g38975 Brassica carinata HOM05D010973 ORTHO05D014088 9.9e-46 187.2 252 52.4
BcaC06g34072 Brassica carinata HOM05D010973 ORTHO05D014088 4.9e-37 158.3 141 68.1
C08p19170 Brassica napus HOM05D010973 ORTHO05D014088 2.1e-35 152.9 223 49.8
C02p25290 Brassica napus HOM05D010973 ORTHO05D014088 9.6e-33 144.1 141 63.1
BcaC06g34074 Brassica carinata HOM05D010973 ORTHO05D014088 8.1e-32 141.0 103 76.7
BcaB03g13985 Brassica carinata HOM05D010973 ORTHO05D014088 3.2e-20 102.4 96 67.7
Thhalv10011596m.g Eutrema salsugineum HOM05D002316 ORTHO05D002280 6.0e-19 98.2 84 64.3
C06p09030 Brassica napus HOM05D002316 ORTHO05D002280 3.9e-18 95.5 89 61.8
AL1G61670 Arabidopsis lyrata HOM05D002316 ORTHO05D002280 1.1e-17 94.0 83 62.7
BcaC08g43517 Brassica carinata HOM05D002316 ORTHO05D002280 1.1e-17 94.0 89 60.7
BolC6t35981H Brassica oleracea HOM05D002316 ORTHO05D002280 1.1e-17 94.0 89 60.7
A06p01090 Brassica napus HOM05D002316 ORTHO05D002280 2.5e-17 92.8 84 64.3
BraA06t23336Z Brassica rapa HOM05D002316 ORTHO05D002280 2.5e-17 92.8 84 64.3
Aa31LG10G1890 Aethionema arabicum HOM05D002316 ORTHO05D002280 1.6e-16 90.1 91 52.7
C03p91300 Brassica napus HOM05D002316 ORTHO05D002280 5.3e-15 85.1 94 62.8
Sp1g39830 Schrenkiella parvula HOM05D002316 ORTHO05D002280 5.3e-15 85.1 97 53.6
BcaC01g01372 Brassica carinata HOM05D002316 ORTHO05D002280 1.5e-14 83.6 94 61.7
BolC3t21445H Brassica oleracea HOM05D002316 ORTHO05D002280 2.6e-14 82.8 144 46.5
BcaB04g17097 Brassica carinata HOM05D002316 ORTHO05D002280 3.4e-14 82.4 99 59.6
BraA08t32224Z Brassica rapa HOM05D002316 ORTHO05D002280 3.4e-14 82.4 83 66.3
A08p01710 Brassica napus HOM05D002316 ORTHO05D002280 5.5e-12 75.1 75 64.0
AT1G53250 Arabidopsis thaliana HOM05D002316 ORTHO05D002280 1.2e-11 73.9 109 42.2
Solyc12g014220.3 Solanum lycopersicum HOM05D002316 ORTHO05D002280 1.2e-11 73.9 80 51.2
Carub.0001s4244 Capsella rubella HOM05D002316 ORTHO05D002280 2.7e-11 72.8 67 58.2
Lj8A150T53 Lonicera japonica HOM05D002316 ORTHO05D002280 3.5e-11 72.4 85 47.1
Peaxi162Scf00934g00148 Petunia axillaris HOM05D002316 ORTHO05D002280 4.6e-11 72.0 82 50.0
Sopen12g006010 Solanum pennellii HOM05D002316 ORTHO05D002280 4.6e-11 72.0 80 48.8
CAN.G292.5 Capsicum annuum HOM05D002316 ORTHO05D002280 6.1e-11 71.6 93 47.3
Cpa.g.sc131.59 Carica papaya HOM05D002316 ORTHO05D002280 5.1e-10 68.6 92 44.6
GSVIVG01014224001 Vitis vinifera HOM05D002316 ORTHO05D002280 5.1e-10 68.6 85 47.1
Nitab4.5_0000035g0100 Nicotiana tabacum HOM05D002316 ORTHO05D002280 6.7e-10 68.2 74 51.4
PGSC0003DMG400015334 Solanum tuberosum HOM05D002316 ORTHO05D002280 6.7e-10 68.2 80 47.5
CARHR043490 Cardamine hirsuta HOM05D002316 ORTHO05D002280 1.9e-09 66.6 95 46.3
Dinv14972 Davidia involucrata HOM05D002316 ORTHO05D002280 3.7e-08 62.4 138 33.3
Manes.02G100500 Manihot esculenta HOM05D002316 ORTHO05D002280 3.7e-08 62.4 110 38.2
Nitab4.5_0005440g0080 Nicotiana tabacum HOM05D002316 ORTHO05D002280 3.7e-08 62.4 103 36.9
MBI06_g25991_MAGBIO Magnolia biondii HOM05D002316 ORTHO05D002280 2.4e-07 59.7 87 43.7
Potri.011G112300 Populus trichocarpa HOM05D002316 ORTHO05D002280 2.4e-07 59.7 85 43.5
COL.COLO4_17596 Corchorus olitorius HOM05D002316 ORTHO05D002280 3.1e-07 59.3 96 37.5
ECA234G4357 Erigeron canadensis HOM05D002316 ORTHO05D002280 3.1e-07 59.3 84 39.3
Nn1g09090 Nelumbo nucifera HOM05D002316 ORTHO05D002280 3.1e-07 59.3 95 41.1
Lsat_1_v5_gn_5_127320 Lactuca sativa HOM05D000043 ORTHO05D009639 5.3e-07 58.5 95 42.1
Thecc.07G106400 Theobroma cacao HOM05D002316 ORTHO05D002280 5.3e-07 58.5 85 42.4
CSS0043472 Camellia sinensis var. sinensis HOM05D002316 ORTHO05D002280 9.0e-07 57.8 80 42.5
DCAR_017163 Daucus carota HOM05D002316 ORTHO05D002280 1.5e-06 57.0 82 40.2
Duzib213G0315 Durio zibethinus HOM05D002316 ORTHO05D002280 1.5e-06 57.0 82 41.5
Migut.H01980 Erythranthe guttata HOM05D002316 ORTHO05D002280 1.5e-06 57.0 92 38.0
Hma1.2p1_0607F.1_g188170 Hydrangea macrophylla HOM05D002316 ORTHO05D002280 2.6e-06 56.2 63 42.9
FAN21G3617 Fragaria x ananassa HOM05D002316 ORTHO05D002280 3.4e-06 55.8 110 38.2
AUR62038474 Chenopodium quinoa HOM05D002316 ORTHO05D002280 4.5e-06 55.5 82 37.8
Cc05_g11320 Coffea canephora HOM05D002316 ORTHO05D002280 4.5e-06 55.5 75 44.0
Gohir.A13G148550 Gossypium hirsutum HOM05D002316 ORTHO05D002280 4.5e-06 55.5 108 34.3
Duzib213G0761 Durio zibethinus HOM05D002316 ORTHO05D002280 7.7e-06 54.7 68 45.6
Gohir.D13G153100 Gossypium hirsutum HOM05D002316 ORTHO05D002280 1.0e-05 54.3 117 35.0
Gorai.013G173000 Gossypium raimondii HOM05D002316 ORTHO05D002280 1.0e-05 54.3 117 35.0
Oeu051116.1 Olea europaea HOM05D002316 ORTHO05D002280 1.0e-05 54.3 93 40.9


User provided reference genes

Program Settings