Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g26875 Brassica carinata HOM05D003666 ORTHO05D004770 5.5e-107 391.0 196 100.0
BcaC05g26880 Brassica carinata HOM05D003666 ORTHO05D004770 3.9e-76 288.5 161 91.3
ATMG00580 Arabidopsis thaliana HOM05D003666 ORTHO05D004770 1.9e-75 286.2 148 97.3
BNapus_Darmor_BZH_scaffold_234p00230 Brassica napus HOM05D003666 ORTHO05D004770 2.5e-75 285.8 161 90.7
Aa31csc553G70 Aethionema arabicum HOM05D003666 ORTHO05D004770 7.3e-75 284.3 161 90.1
BraSC177t45766Z Brassica rapa HOM05D003666 ORTHO05D004770 1.2e-74 283.5 148 96.6
BraSC48t46269Z Brassica rapa HOM05D003666 ORTHO05D004770 1.2e-74 283.5 148 96.6
RcHm_v2.0_MTg0498711 Rosa chinensis HOM05D003666 ORTHO05D004770 9.2e-70 267.3 148 91.9
Aqoxy12s018 Aquilegia oxysepala HOM05D003666 ORTHO05D004770 1.2e-69 266.9 161 84.5
CANSAT16G0036 Cannabis sativa HOM05D003666 ORTHO05D004770 1.6e-69 266.5 148 91.9
TAR626G1001 Trochodendron aralioides HOM05D003666 ORTHO05D004770 2.1e-69 266.2 148 90.5
Nitab4.5_0006007g0010 Nicotiana tabacum HOM05D003666 ORTHO05D004770 3.5e-69 265.4 148 91.2
Solyc00g500172.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 3.5e-69 265.4 148 91.2
Solyc00g500189.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 3.5e-69 265.4 148 91.2
Solyc00g500253.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 3.5e-69 265.4 148 91.2
Ah.10g028200 Amaranthus hybridus HOM05D003666 ORTHO05D004770 4.6e-69 265.0 168 82.7
Ah.10g028750 Amaranthus hybridus HOM05D003666 ORTHO05D004770 4.6e-69 265.0 168 82.7
CDE02G1260 Ceratophyllum demersum HOM05D003666 ORTHO05D004770 7.8e-69 264.2 188 76.6
HanXRQMTg0579201 Helianthus annuus HOM05D003666 ORTHO05D004770 1.3e-68 263.5 148 91.2
Lsat_1_v5_gn_8_46780 Lactuca sativa HOM05D003666 ORTHO05D004770 1.3e-68 263.5 148 91.2
Lj2C1223T18 Lonicera japonica HOM05D003666 ORTHO05D004770 1.7e-68 263.1 148 91.2
CARHR288310 Cardamine hirsuta HOM05D003666 ORTHO05D004770 2.3e-68 262.7 134 97.8
Lalb_Chr00c24g0407401 Lupinus albus HOM05D003666 ORTHO05D004770 3.9e-68 261.9 148 89.9
Potri.007G061861 Populus trichocarpa HOM05D003666 ORTHO05D004770 3.9e-68 261.9 148 90.5
DCAR_032432 Daucus carota HOM05D003666 ORTHO05D004770 6.6e-68 261.2 148 90.5
Medtr0082s0090 Medicago truncatula HOM05D003666 ORTHO05D004770 1.5e-67 260.0 148 89.2
Sed0020058 Sechium edule HOM05D003666 ORTHO05D004770 2.5e-67 259.2 148 89.9
TPR.G36115 Trifolium pratense HOM05D003666 ORTHO05D004770 4.3e-67 258.5 148 89.2
LjContig00439g0017912 Lotus japonicus HOM05D003666 ORTHO05D004770 5.6e-67 258.1 148 88.5
LjContig00439g0019818 Lotus japonicus HOM05D003666 ORTHO05D004770 5.6e-67 258.1 148 88.5
PSO210G0035 Papaver somniferum HOM05D003666 ORTHO05D004770 1.2e-66 256.9 150 86.7
Glyma.10G098500 Glycine max HOM05D003666 ORTHO05D004770 3.7e-63 245.4 183 71.0
Nitab4.5_0000172g1740 Nicotiana tabacum HOM05D003666 ORTHO05D004770 3.7e-63 245.4 161 78.3
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 5.1e-60 235.0 135 88.9
Thhalv10015926m.g Eutrema salsugineum HOM05D003666 ORTHO05D004770 4.0e-57 225.3 148 80.4
arahy.Tifrunner.gnm1.ann1.U43JHG Arachis hypogaea HOM05D003666 ORTHO05D004770 1.3e-55 220.3 148 78.4
arahy.Tifrunner.gnm1.ann1.WXF1XT Arachis hypogaea HOM05D003666 ORTHO05D004770 1.3e-55 220.3 148 78.4
Solyc10g061990.3 Solanum lycopersicum HOM05D003666 ORTHO05D004770 1.1e-54 217.2 134 81.3
Lalb_Chr00c54g0413611 Lupinus albus HOM05D003666 ORTHO05D004770 1.6e-53 213.4 148 77.0
Gorai.001G166300 Gossypium raimondii HOM05D003666 ORTHO05D004770 2.7e-53 212.6 125 86.4
Sed0023789 Sechium edule HOM05D003666 ORTHO05D004770 6.6e-52 208.0 148 76.4
CSS0015485 Camellia sinensis var. sinensis HOM05D003666 ORTHO05D004770 9.0e-49 197.6 148 75.0
Nitab4.5_0000172g0120 Nicotiana tabacum HOM05D003666 ORTHO05D004770 3.4e-40 169.1 110 80.9
BolSC28t60438H Brassica oleracea HOM05D003666 ORTHO05D004770 6.2e-34 148.3 76 96.1
BolC6t36214H Brassica oleracea HOM05D003666 ORTHO05D004770 7.6e-32 141.4 125 62.4
SEGI_23011 Sequoiadendron giganteum HOM05D003666 ORTHO05D004770 6.0e-29 131.7 94 69.1
Cfa023044 Carpinus fangiana HOM05D003666 ORTHO05D004770 2.7e-21 106.3 61 90.2
TPR.G32909 Trifolium pratense HOM05D003666 ORTHO05D004770 2.7e-21 106.3 65 81.5
Lj2A1228G70 Lonicera japonica HOM05D003666 ORTHO05D004770 5.1e-20 102.1 93 62.4
Solyc10g045750.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 6.9e-17 91.7 73 67.1
Ca_14829_v3 Cicer arietinum L. HOM05D003666 ORTHO05D004770 2.2e-15 86.7 136 44.9
SHI15675 Sapria himalayana HOM05D003666 ORTHO05D004770 5.1e-12 75.5 148 39.2
Dinv06695 Davidia involucrata HOM05D003666 ORTHO05D004770 8.8e-12 74.7 42 88.1
SHI04382 Sapria himalayana HOM05D003666 ORTHO05D004770 1.1e-11 74.3 51 70.6
BolSC28t60439H Brassica oleracea HOM05D003666 ORTHO05D004770 4.3e-11 72.4 50 76.0
Nitab4.5_0001291g0020 Nicotiana tabacum HOM05D003666 ORTHO05D004770 2.2e-10 70.1 38 92.1
arahy.Tifrunner.gnm1.ann1.AQ5GJP Arachis hypogaea HOM05D003666 ORTHO05D004770 3.7e-10 69.3 42 81.0
SHI36047 Sapria himalayana HOM05D003666 ORTHO05D004770 1.4e-09 67.4 41 80.5
SMO053G0008 Selaginella moellendorffii HOM05D003666 ORTHO05D004770 9.1e-09 64.7 129 38.8
BraSC77t46648Z Brassica rapa HOM05D003666 ORTHO05D004770 2.6e-08 63.2 44 77.3
SHI36048 Sapria himalayana HOM05D003666 ORTHO05D004770 2.6e-08 63.2 37 78.4
Lsat_1_v5_gn_3_105380 Lactuca sativa HOM05D003666 ORTHO05D004770 4.5e-08 62.4 37 86.5
SHI21046 Sapria himalayana HOM05D003666 ORTHO05D004770 8.5e-07 58.2 34 79.4
C04p19570 Brassica napus HOM05D003666 ORTHO05D004770 7.2e-06 55.1 36 83.3
BolC4t23491H Brassica oleracea HOM05D003666 ORTHO05D004770 7.2e-06 55.1 36 83.3


User provided reference genes

Program Settings