Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g26668 Brassica carinata HOM05D010181 ORTHO05D012280 8.3e-48 193.4 96 100.0
BcaC05g26462 Brassica carinata HOM05D010181 ORTHO05D012280 1.6e-43 179.1 97 92.8
C05p25040 Brassica napus HOM05D010181 ORTHO05D012280 1.6e-43 179.1 97 92.8
BolC5t31237H Brassica oleracea HOM05D010181 ORTHO05D012280 1.6e-43 179.1 97 92.8
BraA09t39439Z Brassica rapa HOM05D010181 ORTHO05D012280 1.8e-42 175.6 98 93.9
A09p39360 Brassica napus HOM05D010181 ORTHO05D012280 5.2e-42 174.1 98 91.8
Sp1g22780 Schrenkiella parvula HOM05D010181 ORTHO05D012280 3.7e-40 167.9 98 86.7
Thhalv10009743m.g Eutrema salsugineum HOM05D010181 ORTHO05D012280 3.5e-38 161.4 98 82.7
CARHR026030 Cardamine hirsuta HOM05D010181 ORTHO05D012280 2.1e-35 152.1 98 77.6
A07p12620 Brassica napus HOM05D010181 ORTHO05D012280 4.9e-32 141.0 96 78.1
BraA07t29040Z Brassica rapa HOM05D010181 ORTHO05D012280 4.9e-32 141.0 96 78.1
BcaC06g35211 Brassica carinata HOM05D010181 ORTHO05D012280 1.4e-31 139.4 96 77.1
C07p18600 Brassica napus HOM05D010181 ORTHO05D012280 1.4e-31 139.4 96 77.1
BolC7t42373H Brassica oleracea HOM05D010181 ORTHO05D012280 1.4e-31 139.4 96 77.1
AT1G25425 Arabidopsis thaliana HOM05D010181 ORTHO05D012280 4.1e-31 137.9 99 78.8
BcaB03g14045 Brassica carinata HOM05D010181 ORTHO05D012280 4.1e-31 137.9 96 77.1
BcaC06g35203 Brassica carinata HOM05D010181 ORTHO05D012280 4.1e-31 137.9 96 77.1
BcaC06g35204 Brassica carinata HOM05D010181 ORTHO05D012280 4.1e-31 137.9 96 77.1
C07p18710 Brassica napus HOM05D010181 ORTHO05D012280 4.1e-31 137.9 96 77.1
BolC7t42381H Brassica oleracea HOM05D010181 ORTHO05D012280 4.1e-31 137.9 96 77.1
AL1G39880 Arabidopsis lyrata HOM05D010181 ORTHO05D012280 1.6e-30 136.0 98 77.6
Carub.0001s2506 Capsella rubella HOM05D010181 ORTHO05D012280 4.1e-23 111.3 98 66.3
Aa31LG7G9070 Aethionema arabicum HOM05D010181 ORTHO05D012280 3.5e-22 108.2 95 63.2
Hma1.2p1_0061F.1_g033900 Hydrangea macrophylla HOM05D008112 ORTHO05D010225 8.9e-10 67.0 97 36.1
CSS0024667 Camellia sinensis var. sinensis HOM05D008112 ORTHO05D010225 2.4e-07 58.9 92 40.2
TAR371G0405 Trochodendron aralioides HOM05D008112 ORTHO05D010225 2.4e-07 58.9 94 36.2
Cfa018594 Carpinus fangiana HOM05D008112 ORTHO05D010225 1.6e-06 56.2 104 37.5
Haze_17483 Corylus avellana HOM05D008112 ORTHO05D010225 1.6e-06 56.2 94 40.4
Lj2g0015777 Lotus japonicus HOM05D008112 ORTHO05D010225 1.6e-06 56.2 53 52.8
Gorai.005G190400 Gossypium raimondii HOM05D008112 ORTHO05D010225 2.7e-06 55.5 93 40.9
Gohir.D02G169900 Gossypium hirsutum HOM05D008112 ORTHO05D010225 3.5e-06 55.1 93 40.9


User provided reference genes

Program Settings