Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g26467 Brassica carinata HOM05D000260 ORTHO05D024301 5.2e-194 681.0 383 100.0
C05p25080 Brassica napus HOM05D000072 ORTHO05D000026 4.9e-83 312.4 200 78.0
C05p25060 Brassica napus HOM05D000072 ORTHO05D000026 2.0e-68 263.8 200 65.5
BolC5t31244H Brassica oleracea HOM05D000260 ORTHO05D000318 6.6e-64 248.8 212 59.4
C05p25120 Brassica napus HOM05D000260 ORTHO05D000318 8.6e-64 248.4 212 59.9
BcaC05g26468 Brassica carinata HOM05D000260 ORTHO05D000318 3.3e-63 246.5 212 59.4
A09p39260 Brassica napus HOM05D000260 ORTHO05D000318 7.3e-63 245.4 213 60.1
BraA09t39428Z Brassica rapa HOM05D000072 ORTHO05D000026 9.6e-63 245.0 214 61.7
BraA09t39426Z Brassica rapa HOM05D000260 ORTHO05D000318 5.2e-61 239.2 198 61.6
BcaB03g14039 Brassica carinata HOM05D000260 ORTHO05D000318 3.4e-60 236.5 234 53.8
BcaC06g35216 Brassica carinata HOM05D000260 ORTHO05D000318 3.8e-59 233.0 234 56.4
C07p18570 Brassica napus HOM05D000260 ORTHO05D000318 3.8e-59 233.0 234 56.4
BolC7t42368H Brassica oleracea HOM05D000260 ORTHO05D000318 3.8e-59 233.0 234 56.4
A07p12570 Brassica napus HOM05D000260 ORTHO05D000318 3.5e-57 226.5 208 55.3
BraA07t29035Z Brassica rapa HOM05D000260 ORTHO05D000318 3.0e-56 223.4 208 54.8
Thhalv10007057m.g Eutrema salsugineum HOM05D000260 ORTHO05D000318 5.3e-53 212.6 224 52.2
Sp1g22830 Schrenkiella parvula HOM05D000260 ORTHO05D000318 1.3e-51 208.0 224 51.3
AL1G39930 Arabidopsis lyrata HOM05D000260 ORTHO05D000318 1.6e-49 201.1 202 53.5
Carub.0001s2511 Capsella rubella HOM05D000031 ORTHO05D000030 4.8e-46 189.5 208 48.6
Carub.0001s2512 Capsella rubella HOM05D000260 ORTHO05D000318 1.1e-45 188.3 208 49.0
BcaC05g26672 Brassica carinata HOM05D000260 ORTHO05D000318 1.4e-45 188.0 124 71.8
CARHR026090 Cardamine hirsuta HOM05D000260 ORTHO05D000318 4.5e-44 183.0 213 47.9
AT1G25390 Arabidopsis thaliana HOM05D000260 ORTHO05D000318 6.4e-43 179.1 209 47.8
Aa31LG7G9100 Aethionema arabicum HOM05D000260 ORTHO05D000318 6.0e-33 146.0 215 40.9
BolC5t31243H Brassica oleracea HOM05D000072 ORTHO05D000026 2.4e-29 134.0 73 83.6
BcaC05g26465 Brassica carinata HOM05D000072 ORTHO05D000026 4.8e-22 109.8 65 76.9
BcaC05g26464 Brassica carinata HOM05D009238 ORTHO05D024301 7.2e-18 95.9 60 71.7
BolC5t31241H Brassica oleracea HOM05D009238 ORTHO05D024301 7.2e-18 95.9 60 71.7
A09p39310 Brassica napus HOM05D000072 ORTHO05D102075 6.1e-17 92.8 101 50.5
BcaC01g00871 Brassica carinata HOM05D003275 ORTHO05D039187 3.4e-12 77.0 83 91.6
FAN12G1998 Fragaria x ananassa HOM05D000072 ORTHO05D000026 6.1e-09 66.2 238 26.9
BraA09t39427Z Brassica rapa HOM05D009238 ORTHO05D024301 3.9e-08 63.5 28 96.4
BraA09t39429Z Brassica rapa HOM05D009238 ORTHO05D024301 2.2e-06 57.8 32 81.2
Potri.010G121350 Populus trichocarpa HOM05D000072 ORTHO05D000026 6.3e-06 56.2 219 24.7


User provided reference genes

Program Settings