Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g26462 Brassica carinata HOM05D010181 ORTHO05D012280 6.4e-48 193.7 97 100.0
BolC5t31237H Brassica oleracea HOM05D010181 ORTHO05D012280 6.4e-48 193.7 97 100.0
C05p25040 Brassica napus HOM05D010181 ORTHO05D012280 5.4e-47 190.7 97 97.9
A09p39360 Brassica napus HOM05D010181 ORTHO05D012280 1.7e-45 185.7 98 96.9
BraA09t39439Z Brassica rapa HOM05D010181 ORTHO05D012280 6.6e-45 183.7 98 94.9
BcaC05g26668 Brassica carinata HOM05D010181 ORTHO05D012280 2.8e-43 178.3 97 92.8
Sp1g22780 Schrenkiella parvula HOM05D010181 ORTHO05D012280 1.7e-40 169.1 98 87.8
Thhalv10009743m.g Eutrema salsugineum HOM05D010181 ORTHO05D012280 1.6e-38 162.5 98 83.7
CARHR026030 Cardamine hirsuta HOM05D010181 ORTHO05D012280 1.9e-36 155.6 98 79.6
AT1G25425 Arabidopsis thaliana HOM05D010181 ORTHO05D012280 1.4e-31 139.4 99 77.8
A07p12620 Brassica napus HOM05D010181 ORTHO05D012280 3.2e-31 138.3 97 76.3
BraA07t29040Z Brassica rapa HOM05D010181 ORTHO05D012280 3.2e-31 138.3 97 76.3
BcaC06g35211 Brassica carinata HOM05D010181 ORTHO05D012280 9.3e-31 136.7 97 75.3
C07p18600 Brassica napus HOM05D010181 ORTHO05D012280 9.3e-31 136.7 97 75.3
BolC7t42373H Brassica oleracea HOM05D010181 ORTHO05D012280 9.3e-31 136.7 97 75.3
BcaB03g14045 Brassica carinata HOM05D010181 ORTHO05D012280 2.7e-30 135.2 97 75.3
BcaC06g35203 Brassica carinata HOM05D010181 ORTHO05D012280 2.7e-30 135.2 97 75.3
BcaC06g35204 Brassica carinata HOM05D010181 ORTHO05D012280 2.7e-30 135.2 97 75.3
C07p18710 Brassica napus HOM05D010181 ORTHO05D012280 2.7e-30 135.2 97 75.3
BolC7t42381H Brassica oleracea HOM05D010181 ORTHO05D012280 2.7e-30 135.2 97 75.3
AL1G39880 Arabidopsis lyrata HOM05D010181 ORTHO05D012280 1.0e-29 133.3 98 74.5
Carub.0001s2506 Capsella rubella HOM05D010181 ORTHO05D012280 5.8e-25 117.5 100 69.0
Aa31LG7G9070 Aethionema arabicum HOM05D010181 ORTHO05D012280 3.5e-22 108.2 96 62.5
Hma1.2p1_0061F.1_g033900 Hydrangea macrophylla HOM05D008112 ORTHO05D010225 1.9e-07 59.3 98 32.7
TAR371G0405 Trochodendron aralioides HOM05D008112 ORTHO05D010225 5.5e-07 57.8 95 35.8
Cfa018594 Carpinus fangiana HOM05D008112 ORTHO05D010225 3.6e-06 55.1 102 34.3
Haze_17483 Corylus avellana HOM05D008112 ORTHO05D010225 4.6e-06 54.7 95 38.9
Lj2g0015777 Lotus japonicus HOM05D008112 ORTHO05D010225 4.6e-06 54.7 54 50.0
Gohir.D02G169900 Gossypium hirsutum HOM05D008112 ORTHO05D010225 6.1e-06 54.3 97 37.1
Gorai.005G190400 Gossypium raimondii HOM05D008112 ORTHO05D010225 7.9e-06 53.9 97 37.1


User provided reference genes

Program Settings