Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g26435 Brassica carinata HOM05D002308 ORTHO05D002535 1.3e-67 259.6 134 100.0
C05p24830 Brassica napus HOM05D002308 ORTHO05D002535 7.4e-63 243.8 125 99.2
BolC5t31212H Brassica oleracea HOM05D002308 ORTHO05D002535 2.1e-41 172.6 127 76.4
A09p39690 Brassica napus HOM05D002308 ORTHO05D002535 1.5e-39 166.4 126 77.0
BraA09t39468Z Brassica rapa HOM05D002308 ORTHO05D002535 1.5e-39 166.4 126 77.0
Sp1g22550 Schrenkiella parvula HOM05D002308 ORTHO05D002535 2.7e-36 155.6 138 71.7
Thhalv10007556m.g Eutrema salsugineum HOM05D002308 ORTHO05D002535 2.3e-32 142.5 139 69.1
BcaC05g26645 Brassica carinata HOM05D002308 ORTHO05D002535 6.8e-32 141.0 131 71.8
A08p27150 Brassica napus HOM05D002308 ORTHO05D002535 8.1e-25 117.5 136 58.8
BraA08t34660Z Brassica rapa HOM05D002308 ORTHO05D002535 8.1e-25 117.5 136 58.8
THA.LOC104821972 Tarenaya hassleriana HOM05D002308 ORTHO05D002535 2.0e-23 112.8 145 54.5
AT1G26120 Arabidopsis thaliana HOM05D002308 ORTHO05D002535 2.4e-21 105.9 147 53.7
Aa31LG7G8880 Aethionema arabicum HOM05D002308 ORTHO05D002535 5.1e-19 98.2 144 50.7
AL1G39650 Arabidopsis lyrata HOM05D002308 ORTHO05D002535 6.8e-16 87.8 151 48.3
TWI31G0367 Tripterygium wilfordii HOM05D002308 ORTHO05D002535 9.2e-13 77.4 140 43.6
Carub.0001s2484 Capsella rubella HOM05D002308 ORTHO05D002535 3.5e-12 75.5 146 45.9
C03p72710 Brassica napus HOM05D002308 ORTHO05D002535 5.1e-11 71.6 86 58.1
Dinv27425 Davidia involucrata HOM05D002308 ORTHO05D002535 5.1e-11 71.6 129 43.4
BolC3t19569H Brassica oleracea HOM05D002308 ORTHO05D002535 6.6e-11 71.2 87 57.5
Thecc.02G364100 Theobroma cacao HOM05D002308 ORTHO05D002535 8.6e-11 70.9 131 42.0
Psat4g113600 Pisum sativum HOM05D002308 ORTHO05D002535 2.5e-10 69.3 128 40.6
PGR102G0767 Punica granatum HOM05D002308 ORTHO05D002535 9.6e-10 67.4 89 51.7
Duzib251G0464 Durio zibethinus HOM05D002308 ORTHO05D002535 1.1e-08 63.9 129 40.3
Cpa.g.sc1.241 Carica papaya HOM05D002308 ORTHO05D002535 1.8e-08 63.2 134 41.8
GSVIVG01012000001 Vitis vinifera HOM05D002308 ORTHO05D002535 1.8e-08 63.2 121 43.0
TWI79G0406 Tripterygium wilfordii HOM05D002308 ORTHO05D002535 3.1e-08 62.4 137 41.6
Hund05780 Selenicereus undatus HOM05D002308 ORTHO05D002535 1.2e-07 60.5 115 41.7
CiPaw.05G116700 Carya illinoinensis HOM05D002308 ORTHO05D002535 1.5e-07 60.1 133 36.8
Gorai.013G079100 Gossypium raimondii HOM05D002308 ORTHO05D002535 2.0e-07 59.7 133 39.8
COL.COLO4_11239 Corchorus olitorius HOM05D002308 ORTHO05D002535 3.4e-07 58.9 133 40.6
Gohir.A13G071100 Gossypium hirsutum HOM05D002308 ORTHO05D002535 1.7e-06 56.6 133 38.3
CANSAT64G2918 Cannabis sativa HOM05D002308 ORTHO05D002535 2.2e-06 56.2 129 34.9
VMungo0251G3436 Vigna mungo HOM05D002308 ORTHO05D002535 2.9e-06 55.8 133 39.1
QL03p044766 Quercus lobata HOM05D002308 ORTHO05D002535 3.8e-06 55.5 134 35.1
Sc11g0002960 Simmondsia chinensis HOM05D002308 ORTHO05D002535 3.8e-06 55.5 95 44.2


User provided reference genes

Program Settings