Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g26384 Brassica carinata HOM05D000715 ORTHO05D000024 3.5e-67 258.1 123 100.0
BolC5t31149H Brassica oleracea HOM05D000715 ORTHO05D000024 3.5e-67 258.1 123 100.0
C05p24140 Brassica napus HOM05D000715 ORTHO05D000024 1.0e-66 256.5 123 98.4
C05p24150 Brassica napus HOM05D000715 ORTHO05D000024 3.8e-53 211.5 124 84.7
BolC5t31150H Brassica oleracea HOM05D000715 ORTHO05D000024 3.8e-53 211.5 124 84.7
BraA09t39520Z Brassica rapa HOM05D000715 ORTHO05D000024 3.6e-48 194.9 124 80.6
A09p40220 Brassica napus HOM05D000715 ORTHO05D000024 8.4e-45 183.7 124 78.2
Sp1g22010 Schrenkiella parvula HOM05D000715 ORTHO05D000024 1.9e-44 182.6 135 70.4
BcaC05g26385 Brassica carinata HOM05D000715 ORTHO05D000024 2.3e-42 175.6 129 72.9
CARHR025150 Cardamine hirsuta HOM05D000715 ORTHO05D000024 5.1e-42 174.5 125 71.2
AL1G38900 Arabidopsis lyrata HOM05D000715 ORTHO05D000024 1.5e-38 162.9 130 68.5
Thhalv10007936m.g Eutrema salsugineum HOM05D000715 ORTHO05D000024 1.5e-38 162.9 135 67.4
Carub.0001s2422 Capsella rubella HOM05D000715 ORTHO05D000024 2.6e-38 162.2 129 65.1
AT1G26790 Arabidopsis thaliana HOM05D000715 ORTHO05D000024 1.1e-36 156.8 130 64.6
BcaB03g12005 Brassica carinata HOM05D000715 ORTHO05D000024 1.1e-36 156.8 135 64.4
BraA08t34689Z Brassica rapa HOM05D000715 ORTHO05D000024 1.8e-34 149.4 131 64.9
A08p27490 Brassica napus HOM05D000715 ORTHO05D000024 8.7e-34 147.1 131 64.1
C08p22860 Brassica napus HOM05D000715 ORTHO05D000024 1.1e-31 140.2 131 62.6
BolC8t49922H Brassica oleracea HOM05D000715 ORTHO05D000024 5.3e-31 137.9 131 61.8
CARHR062520 Cardamine hirsuta HOM05D000715 ORTHO05D000024 1.1e-25 120.2 137 54.7
BcaC07g39276 Brassica carinata HOM05D000715 ORTHO05D000024 2.5e-25 119.0 116 61.2
A07p31550 Brassica napus HOM05D000715 ORTHO05D000024 6.3e-24 114.4 134 53.7
BraA07t30784Z Brassica rapa HOM05D000715 ORTHO05D000024 6.3e-24 114.4 134 53.7
AT1G69570 Arabidopsis thaliana HOM05D000715 ORTHO05D000024 1.4e-23 113.2 135 52.6
AL2G28710 Arabidopsis lyrata HOM05D000715 ORTHO05D000024 1.8e-23 112.8 135 52.6
Carub.0002s1624 Capsella rubella HOM05D000715 ORTHO05D000024 9.0e-23 110.5 135 52.6
Thhalv10018679m.g Eutrema salsugineum HOM05D000715 ORTHO05D000024 3.4e-22 108.6 137 52.6
BcaC08g45883 Brassica carinata HOM05D000715 ORTHO05D000024 4.5e-22 108.2 134 52.2
C06p36840 Brassica napus HOM05D000715 ORTHO05D000024 4.5e-22 108.2 134 52.2
BolC6t38792H Brassica oleracea HOM05D000715 ORTHO05D000024 4.5e-22 108.2 134 52.2
BcaB03g15481 Brassica carinata HOM05D000715 ORTHO05D000024 6.5e-21 104.4 134 50.0
Sp5g24690 Schrenkiella parvula HOM05D000715 ORTHO05D000024 5.5e-20 101.3 136 50.7
BcaB03g14726 Brassica carinata HOM05D000715 ORTHO05D000024 1.6e-19 99.8 128 48.4
BcaC08g46398 Brassica carinata HOM05D000715 ORTHO05D000024 1.6e-19 99.8 128 48.4
BcaB03g14727 Brassica carinata HOM05D000715 ORTHO05D000024 2.1e-19 99.4 130 50.8
BraA07t31176Z Brassica rapa HOM05D000715 ORTHO05D000024 5.1e-18 94.7 126 50.0
C06p43300 Brassica napus HOM05D000715 ORTHO05D000024 8.8e-18 94.0 128 46.1
BolC6t39405H Brassica oleracea HOM05D000715 ORTHO05D000024 8.8e-18 94.0 128 46.1
A07p35930 Brassica napus HOM05D000715 ORTHO05D000024 1.9e-17 92.8 126 49.2
THA.LOC104822909 Tarenaya hassleriana HOM05D000715 ORTHO05D000024 6.9e-15 84.3 133 44.4
Aa31LG7G8330 Aethionema arabicum HOM05D000715 ORTHO05D000024 1.5e-14 83.2 116 50.9


User provided reference genes

Program Settings