Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g25995 Brassica carinata HOM05D000589 ORTHO05D000401 1.1e-117 426.8 227 100.0
BcaC03g16442 Brassica carinata HOM05D000589 ORTHO05D000401 3.5e-97 358.6 224 87.5
BcaB08g35107 Brassica carinata HOM05D000589 ORTHO05D000401 3.0e-72 275.8 217 72.8
BcaC01g04973 Brassica carinata HOM05D000589 ORTHO05D000401 4.1e-69 265.4 226 69.5
BolC2t11251H Brassica oleracea HOM05D000589 ORTHO05D000401 6.9e-69 264.6 226 69.5
BcaC01g06309 Brassica carinata HOM05D000589 ORTHO05D000401 4.5e-68 261.9 226 68.6
BcaC02g11154 Brassica carinata HOM05D000589 ORTHO05D000401 1.6e-65 253.4 244 61.1
BcaC06g33355 Brassica carinata HOM05D000589 ORTHO05D000401 2.1e-65 253.1 225 66.2
BcaC05g25289 Brassica carinata HOM05D000589 ORTHO05D000401 6.7e-64 248.1 247 60.7
BcaC01g06250 Brassica carinata HOM05D000589 ORTHO05D000401 1.6e-62 243.4 218 65.6
BolC5t31626H Brassica oleracea HOM05D000589 ORTHO05D000401 2.8e-62 242.7 225 63.6
BcaC03g17918 Brassica carinata HOM05D000589 ORTHO05D000401 8.2e-62 241.1 204 70.1
BolC3t14123H Brassica oleracea HOM05D000589 ORTHO05D000401 3.1e-61 239.2 205 69.3
BcaC02g09851 Brassica carinata HOM05D000589 ORTHO05D000401 9.0e-61 237.7 254 58.7
BolC6t38709H Brassica oleracea HOM05D000589 ORTHO05D000401 3.4e-60 235.7 225 62.7
BcaC04g20599 Brassica carinata HOM05D000589 ORTHO05D003268 9.4e-58 227.6 232 59.1
BolC2t08934H Brassica oleracea HOM05D000589 ORTHO05D000401 7.9e-57 224.6 220 63.6
BcaC07g36993 Brassica carinata HOM05D000589 ORTHO05D000401 2.0e-44 183.3 225 52.0
BolC8t46812H Brassica oleracea HOM05D000589 ORTHO05D000401 2.0e-44 183.3 182 62.6
BcaB01g03246 Brassica carinata HOM05D000589 ORTHO05D000401 3.7e-38 162.5 113 78.8
BcaC04g22600 Brassica carinata HOM05D000589 ORTHO05D000401 1.4e-37 160.6 108 77.8
BcaB02g06903 Brassica carinata HOM05D000589 ORTHO05D000401 7.0e-37 158.3 113 77.9
BcaC04g20936 Brassica carinata HOM05D000589 ORTHO05D000401 4.5e-36 155.6 120 70.8
BcaC07g39967 Brassica carinata HOM05D000589 ORTHO05D000401 4.5e-36 155.6 129 65.9
BcaB01g02536 Brassica carinata HOM05D000589 ORTHO05D000401 2.2e-35 153.3 108 74.1
BcaC06g35560 Brassica carinata HOM05D000589 ORTHO05D000401 3.8e-35 152.5 120 70.8
BcaC03g15282 Brassica carinata HOM05D000589 ORTHO05D000401 5.0e-35 152.1 113 73.5
BcaC05g29037 Brassica carinata HOM05D000589 ORTHO05D000401 8.5e-35 151.4 129 67.4
BcaB05g23367 Brassica carinata HOM05D000305 ORTHO05D000065 5.5e-34 148.7 125 68.0
BcaB06g28450 Brassica carinata HOM05D000589 ORTHO05D000401 4.0e-32 142.5 113 69.0
BcaC03g16908 Brassica carinata HOM05D000589 ORTHO05D000401 5.2e-32 142.1 128 63.3
BcaC05g27041 Brassica carinata HOM05D000589 ORTHO05D000401 1.5e-31 140.6 120 66.7
BcaB04g19103 Brassica carinata HOM05D000589 ORTHO05D000401 3.4e-31 139.4 124 63.7
BcaC03g15193 Brassica carinata HOM05D000589 ORTHO05D000401 7.5e-31 138.3 113 68.1
BolC9t55114H Brassica oleracea HOM05D000589 ORTHO05D000401 5.4e-29 132.1 128 63.3
BcaB08g35715 Brassica carinata HOM05D000589 ORTHO05D000401 2.2e-27 126.7 89 75.3
BcaC04g22215 Brassica carinata HOM05D000589 ORTHO05D000401 2.9e-27 126.3 107 65.4
BcaB03g12060 Brassica carinata HOM05D000589 ORTHO05D000401 2.5e-26 123.2 113 61.9
BcaC01g00162 Brassica carinata HOM05D000589 ORTHO05D000401 5.5e-26 122.1 120 60.8
BcaB02g10060 Brassica carinata HOM05D000589 ORTHO05D000401 1.6e-25 120.6 135 56.3
BcaB05g24761 Brassica carinata HOM05D000589 ORTHO05D000401 2.7e-25 119.8 189 46.6
BcaC04g22173 Brassica carinata HOM05D000589 ORTHO05D000401 8.0e-25 118.2 98 69.4
BcaC06g33622 Brassica carinata HOM05D000589 ORTHO05D000401 1.7e-22 110.5 76 76.3
BcaB02g10059 Brassica carinata HOM05D000589 ORTHO05D000401 2.2e-22 110.2 83 73.5
BcaB04g17126 Brassica carinata HOM05D000589 ORTHO05D000401 2.2e-22 110.2 105 59.0
BcaC07g37004 Brassica carinata HOM05D000589 ORTHO05D000401 2.4e-21 106.7 89 66.3
BcaC09g51098 Brassica carinata HOM05D000589 ORTHO05D000401 2.1e-17 93.6 64 81.2
BolC7t44270H Brassica oleracea HOM05D000126 ORTHO05D000085 2.8e-17 93.2 110 57.3
BcaC01g03681 Brassica carinata HOM05D000589 ORTHO05D000401 1.0e-16 91.3 114 53.5
BolC4t27556H Brassica oleracea HOM05D000589 ORTHO05D000401 1.8e-16 90.5 95 54.7
BolC2t06323H Brassica oleracea HOM05D000589 ORTHO05D000401 3.0e-16 89.7 104 51.9
C02p22880 Brassica napus HOM05D000589 ORTHO05D000401 5.7e-15 85.5 96 54.2
Carub.0004s1930 Capsella rubella HOM05D000589 ORTHO05D000401 9.8e-15 84.7 98 53.1
BolC1t03974H Brassica oleracea HOM05D000589 ORTHO05D000401 2.2e-14 83.6 97 54.6
BolC1t04683H Brassica oleracea HOM05D009120 ORTHO05D024093 4.9e-14 82.4 95 52.6
BolC5t32197H Brassica oleracea HOM05D000589 ORTHO05D000401 4.9e-14 82.4 97 51.5
BcaB04g18207 Brassica carinata HOM05D000589 ORTHO05D000401 8.3e-14 81.6 54 77.8
BolC6t36890H Brassica oleracea HOM05D000589 ORTHO05D000401 1.4e-13 80.9 106 51.9
BolC9t55147H Brassica oleracea HOM05D000589 ORTHO05D000401 1.4e-13 80.9 150 41.3
BolC3t17253H Brassica oleracea HOM05D000589 ORTHO05D000401 2.4e-13 80.1 58 74.1
BcaC07g39621 Brassica carinata HOM05D000589 ORTHO05D000401 4.1e-13 79.3 97 52.6
BcaC09g48667 Brassica carinata HOM05D009120 ORTHO05D024093 4.1e-13 79.3 95 50.5
C01p47140 Brassica napus HOM05D009120 ORTHO05D024093 4.1e-13 79.3 95 50.5
BcaC03g17917 Brassica carinata HOM05D000589 ORTHO05D000401 7.0e-13 78.6 92 57.6
BcaC05g27498 Brassica carinata HOM05D000589 ORTHO05D014060 7.0e-13 78.6 88 53.4
BolC5t34603H Brassica oleracea HOM05D000589 ORTHO05D000401 7.0e-13 78.6 90 51.1
Carub.0007s3087 Capsella rubella HOM05D000589 ORTHO05D011628 9.2e-13 78.2 119 40.3
BolC9t58423H Brassica oleracea HOM05D000589 ORTHO05D000401 1.6e-12 77.4 95 49.5
BcaC03g14627 Brassica carinata HOM05D000589 ORTHO05D000401 3.5e-12 76.3 95 49.5
CARHR256470 Cardamine hirsuta HOM05D000589 ORTHO05D000401 5.9e-12 75.5 95 51.6
BcaC03g17200 Brassica carinata HOM05D000589 ORTHO05D000401 7.8e-12 75.1 102 47.1
BcaC02g11478 Brassica carinata HOM05D006180 ORTHO05D008836 1.0e-11 74.7 65 66.2
BcaC04g19453 Brassica carinata HOM05D000589 ORTHO05D000401 1.0e-11 74.7 98 49.0
BcaB07g32864 Brassica carinata HOM05D000589 ORTHO05D000401 1.3e-11 74.3 99 50.5
BcaC07g38856 Brassica carinata HOM05D000589 ORTHO05D000401 1.3e-11 74.3 97 47.4
CARHR057040 Cardamine hirsuta HOM05D000589 ORTHO05D000401 5.0e-11 72.4 102 49.0
Carub.0005s0847 Capsella rubella HOM05D000589 ORTHO05D000401 8.6e-11 71.6 99 44.4
BcaB04g19149 Brassica carinata HOM05D000589 ORTHO05D000401 1.5e-10 70.9 93 51.6
BcaC08g45835 Brassica carinata HOM05D000589 ORTHO05D000401 1.9e-10 70.5 94 47.9
CARHR151420 Cardamine hirsuta HOM05D000589 ORTHO05D014060 4.3e-10 69.3 89 49.4
BcaC03g16704 Brassica carinata HOM05D000589 ORTHO05D000401 1.6e-09 67.4 98 46.9
BcaC09g49614 Brassica carinata HOM05D000589 ORTHO05D000401 1.6e-09 67.4 91 49.5
Thhalv10009540m.g Eutrema salsugineum HOM05D000589 ORTHO05D000401 1.6e-09 67.4 93 48.4
BcaC08g43109 Brassica carinata HOM05D000589 ORTHO05D000401 2.8e-09 66.6 99 45.5
Aa31LG8G16650 Aethionema arabicum HOM05D000639 ORTHO05D003485 3.6e-09 66.2 105 45.7
BcaC02g11013 Brassica carinata HOM05D000589 ORTHO05D000401 3.6e-09 66.2 89 50.6
BcaC05g25717 Brassica carinata HOM05D000589 ORTHO05D000401 3.6e-09 66.2 89 50.6
Thhalv10017987m.g Eutrema salsugineum HOM05D000589 ORTHO05D000401 4.7e-09 65.9 89 47.2
AT5G52547 Arabidopsis thaliana HOM05D000589 ORTHO05D014060 6.2e-09 65.5 94 42.6
BcaC06g35414 Brassica carinata HOM05D000589 ORTHO05D000401 6.2e-09 65.5 90 47.8
AT3G47680 Arabidopsis thaliana HOM05D000589 ORTHO05D000401 8.0e-09 65.1 107 39.3
BcaB04g18258 Brassica carinata HOM05D000589 ORTHO05D000401 8.0e-09 65.1 84 51.2
BcaC06g35102 Brassica carinata HOM05D000589 ORTHO05D000401 8.0e-09 65.1 89 50.6
BolC2t10503H Brassica oleracea HOM05D000589 ORTHO05D000401 8.0e-09 65.1 46 78.3
BcaC09g48715 Brassica carinata HOM05D000589 ORTHO05D000401 1.0e-08 64.7 89 47.2
CARHR130420 Cardamine hirsuta HOM05D000589 ORTHO05D000401 1.0e-08 64.7 89 44.9
BolC7t43162H Brassica oleracea HOM05D000589 ORTHO05D000401 1.4e-08 64.3 95 42.1
BcaB05g24938 Brassica carinata HOM05D000589 ORTHO05D000401 1.8e-08 63.9 84 50.0
BcaC04g21117 Brassica carinata HOM05D000589 ORTHO05D000401 2.3e-08 63.5 88 48.9
BcaC09g51529 Brassica carinata HOM05D000589 ORTHO05D000401 2.3e-08 63.5 89 44.9
BcaC09g51799 Brassica carinata HOM05D000589 ORTHO05D000401 2.3e-08 63.5 89 46.1
BcaC03g18099 Brassica carinata HOM05D000589 ORTHO05D000401 3.1e-08 63.2 86 47.7
BcaC04g22354 Brassica carinata HOM05D000589 ORTHO05D000401 3.1e-08 63.2 88 48.9
BolC5t30732H Brassica oleracea HOM05D000589 ORTHO05D005968 3.1e-08 63.2 90 44.4
Carub.0006s2605 Capsella rubella HOM05D009589 ORTHO05D011628 3.1e-08 63.2 92 46.7
BcaC08g44892 Brassica carinata HOM05D000589 ORTHO05D000401 4.0e-08 62.8 84 48.8
CARHR190150 Cardamine hirsuta HOM05D000589 ORTHO05D000401 4.0e-08 62.8 90 45.6
BcaB02g11137 Brassica carinata HOM05D000589 ORTHO05D000401 5.2e-08 62.4 84 51.2
BcaC02g09081 Brassica carinata HOM05D000589 ORTHO05D000401 5.2e-08 62.4 89 44.9
BcaC03g15869 Brassica carinata HOM05D000589 ORTHO05D000401 5.2e-08 62.4 85 50.6
BcaC05g26168 Brassica carinata HOM05D000589 ORTHO05D000401 5.2e-08 62.4 89 44.9
BcaB01g00894 Brassica carinata HOM05D000589 ORTHO05D000401 6.8e-08 62.0 84 50.0
BcaC01g03565 Brassica carinata HOM05D000589 ORTHO05D000401 6.8e-08 62.0 90 44.4
BcaC04g22127 Brassica carinata HOM05D000589 ORTHO05D000401 8.9e-08 61.6 90 47.8
BcaC06g34721 Brassica carinata HOM05D000589 ORTHO05D000401 8.9e-08 61.6 90 50.0
BcaC05g29493 Brassica carinata HOM05D000589 ORTHO05D000401 1.2e-07 61.2 83 48.2
BcaC08g46133 Brassica carinata HOM05D000589 ORTHO05D000401 1.2e-07 61.2 92 45.7
BcaNung05024 Brassica carinata HOM05D000589 ORTHO05D000401 1.2e-07 61.2 97 41.2
C02p50410 Brassica napus HOM05D000589 ORTHO05D000401 1.2e-07 61.2 90 44.4
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 1.2e-07 61.2 88 45.5
BolC3t18627H Brassica oleracea HOM05D000589 ORTHO05D000401 1.2e-07 61.2 85 47.1
BcaC02g10574 Brassica carinata HOM05D000589 ORTHO05D000401 1.5e-07 60.8 96 43.8
C03p63700 Brassica napus HOM05D000589 ORTHO05D000401 1.5e-07 60.8 84 47.6
BolC6t37665H Brassica oleracea HOM05D000589 ORTHO05D000401 1.5e-07 60.8 84 48.8
Thhalv10000723m.g Eutrema salsugineum HOM05D000589 ORTHO05D000401 1.5e-07 60.8 88 42.0
BcaC05g24983 Brassica carinata HOM05D000589 ORTHO05D000401 2.0e-07 60.5 95 41.1
BcaC05g25199 Brassica carinata HOM05D000589 ORTHO05D000401 2.0e-07 60.5 83 47.0
BcaC05g26280 Brassica carinata HOM05D000589 ORTHO05D000401 2.0e-07 60.5 83 47.0
BcaC08g44546 Brassica carinata HOM05D000589 ORTHO05D001885 2.0e-07 60.5 85 40.0
BcaB06g28309 Brassica carinata HOM05D000589 ORTHO05D000401 2.6e-07 60.1 93 46.2
BcaC01g00901 Brassica carinata HOM05D000589 ORTHO05D000401 2.6e-07 60.1 89 43.8
BcaC08g43342 Brassica carinata HOM05D000589 ORTHO05D000401 2.6e-07 60.1 91 44.0
BolC2t09327H Brassica oleracea HOM05D000589 ORTHO05D014060 2.6e-07 60.1 94 41.5
BolC3t21403H Brassica oleracea HOM05D000589 ORTHO05D000401 2.6e-07 60.1 95 42.1
BcaC01g02623 Brassica carinata HOM05D000589 ORTHO05D000401 3.4e-07 59.7 93 41.9
BcaC09g50773 Brassica carinata HOM05D000589 ORTHO05D000401 3.4e-07 59.7 96 44.8
BolC7t42127H Brassica oleracea HOM05D000589 ORTHO05D000401 3.4e-07 59.7 102 39.2
AL5G28650 Arabidopsis lyrata HOM05D000589 ORTHO05D000401 4.4e-07 59.3 95 43.2
AL6G29040 Arabidopsis lyrata HOM05D000589 ORTHO05D000401 4.4e-07 59.3 95 43.2
BcaC01g05206 Brassica carinata HOM05D000589 ORTHO05D024123 4.4e-07 59.3 80 48.8
BcaC06g36245 Brassica carinata HOM05D000589 ORTHO05D000401 4.4e-07 59.3 86 47.7
BolC7t41019H Brassica oleracea HOM05D000589 ORTHO05D000401 4.4e-07 59.3 115 42.6
BcaC08g45830 Brassica carinata HOM05D000589 ORTHO05D000401 5.8e-07 58.9 92 43.5
BcaC02g08170 Brassica carinata HOM05D000589 ORTHO05D000401 7.5e-07 58.5 90 46.7
BcaC07g39061 Brassica carinata HOM05D000589 ORTHO05D000401 7.5e-07 58.5 90 42.2
BcaC09g51052 Brassica carinata HOM05D000589 ORTHO05D027494 7.5e-07 58.5 92 44.6
BolC9t53773H Brassica oleracea HOM05D000589 ORTHO05D000401 7.5e-07 58.5 90 45.6
BcaC07g38294 Brassica carinata HOM05D000589 ORTHO05D013236 9.8e-07 58.2 97 39.2
BcaC07g38726 Brassica carinata HOM05D000589 ORTHO05D000401 9.8e-07 58.2 86 46.5
BolC2t11945H Brassica oleracea HOM05D000589 ORTHO05D000401 9.8e-07 58.2 92 43.5
Aa31LG11G430 Aethionema arabicum HOM05D000589 ORTHO05D000401 1.3e-06 57.8 93 45.2
AL8G21500 Arabidopsis lyrata HOM05D000589 ORTHO05D000401 1.3e-06 57.8 95 42.1
BcaC04g23412 Brassica carinata HOM05D000589 ORTHO05D000401 1.3e-06 57.8 90 45.6
BcaC07g38991 Brassica carinata HOM05D000589 ORTHO05D000401 1.3e-06 57.8 90 45.6
C03p90850 Brassica napus HOM05D000589 ORTHO05D000401 1.3e-06 57.8 95 41.1
BolC9t58870H Brassica oleracea HOM05D000589 ORTHO05D027472 1.3e-06 57.8 94 42.6
BcaB04g17336 Brassica carinata HOM05D000589 ORTHO05D000401 1.7e-06 57.4 84 48.8
BcaC02g10036 Brassica carinata HOM05D000589 ORTHO05D014060 1.7e-06 57.4 60 48.3
BcaB06g26070 Brassica carinata HOM05D000589 ORTHO05D000401 2.2e-06 57.0 89 44.9
BcaB08g35594 Brassica carinata HOM05D000589 ORTHO05D000401 2.2e-06 57.0 96 41.7
BcaC01g02938 Brassica carinata HOM05D000589 ORTHO05D000401 2.2e-06 57.0 83 45.8
BcaC02g10499 Brassica carinata HOM05D000589 ORTHO05D000401 2.2e-06 57.0 85 43.5
BcaC03g15720 Brassica carinata HOM05D000589 ORTHO05D039119 2.2e-06 57.0 97 41.2
BcaC03g16996 Brassica carinata HOM05D000589 ORTHO05D000401 2.2e-06 57.0 85 43.5
Thhalv10019661m.g Eutrema salsugineum HOM05D000589 ORTHO05D000401 2.2e-06 57.0 89 43.8
AL8G16460 Arabidopsis lyrata HOM05D000589 ORTHO05D000401 2.9e-06 56.6 95 42.1
AL8G33970 Arabidopsis lyrata HOM05D000589 ORTHO05D000401 2.9e-06 56.6 95 42.1
BcaC01g00954 Brassica carinata HOM05D000589 ORTHO05D000401 2.9e-06 56.6 85 43.5
BcaC03g15625 Brassica carinata HOM05D029759 ORTHO05D024123 2.9e-06 56.6 80 46.2
BolC1t01662H Brassica oleracea HOM05D000589 ORTHO05D001885 2.9e-06 56.6 87 39.1
BolC5t30339H Brassica oleracea HOM05D000589 ORTHO05D000401 2.9e-06 56.6 98 43.9
BcaB05g21783 Brassica carinata HOM05D000589 ORTHO05D014060 3.7e-06 56.2 57 50.9
BolC2t08087H Brassica oleracea HOM05D000589 ORTHO05D000401 3.7e-06 56.2 91 45.1
BolC9t57367H Brassica oleracea HOM05D000589 ORTHO05D001885 3.7e-06 56.2 96 38.5
BcaC04g20168 Brassica carinata HOM05D000589 ORTHO05D000401 4.9e-06 55.8 86 45.3
BcaC07g41014 Brassica carinata HOM05D000589 ORTHO05D000401 4.9e-06 55.8 83 45.8
BcaC01g06161 Brassica carinata HOM05D000589 ORTHO05D000401 6.4e-06 55.5 96 43.8
BcaC02g08679 Brassica carinata HOM05D000589 ORTHO05D001885 6.4e-06 55.5 84 38.1
BcaC09g48857 Brassica carinata HOM05D000589 ORTHO05D000401 6.4e-06 55.5 64 46.9
C09p61020 Brassica napus HOM05D000589 ORTHO05D000401 6.4e-06 55.5 83 44.6
BolC2t11203H Brassica oleracea HOM05D000589 ORTHO05D000401 6.4e-06 55.5 87 44.8
BcaB06g25928 Brassica carinata HOM05D000589 ORTHO05D013236 8.3e-06 55.1 94 40.4
BcaC03g15056 Brassica carinata HOM05D000589 ORTHO05D014060 8.3e-06 55.1 63 47.6
BcaC03g17143 Brassica carinata HOM05D000589 ORTHO05D000401 8.3e-06 55.1 83 47.0
BcaC06g35286 Brassica carinata HOM05D000589 ORTHO05D000401 8.3e-06 55.1 89 40.4
BcaNung04344 Brassica carinata HOM05D000589 ORTHO05D000401 8.3e-06 55.1 83 44.6
BolC4t26616H Brassica oleracea HOM05D000589 ORTHO05D000401 8.3e-06 55.1 83 41.0
BolC8t47046H Brassica oleracea HOM05D000589 ORTHO05D000401 8.3e-06 55.1 93 44.1
BraA09t40699Z Brassica rapa HOM05D000589 ORTHO05D000401 8.3e-06 55.1 89 38.2


User provided reference genes

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