Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g25875 Brassica carinata HOM05D002776 ORTHO05D011320 1.9e-33 145.2 69 100.0
C02p52040 Brassica napus HOM05D002776 ORTHO05D000395 1.1e-22 109.4 51 98.0
C05p34920 Brassica napus HOM05D002776 ORTHO05D011320 1.1e-22 109.4 51 98.0
C07p38490 Brassica napus HOM05D002776 ORTHO05D011320 1.1e-22 109.4 51 98.0
BolC6t36736H Brassica oleracea HOM05D002776 ORTHO05D011320 1.1e-22 109.4 51 98.0
A09p29650 Brassica napus HOM05D002776 ORTHO05D000395 3.3e-22 107.8 51 96.1
C02p53520 Brassica napus HOM05D002776 ORTHO05D003044 3.3e-22 107.8 51 96.1
BraA09t38530Z Brassica rapa HOM05D002776 ORTHO05D000395 3.3e-22 107.8 51 96.1
BcaC02g09778 Brassica carinata HOM05D002776 ORTHO05D011320 4.3e-22 107.5 51 96.1
BcaC02g10286 Brassica carinata HOM05D002776 ORTHO05D011320 4.3e-22 107.5 51 96.1
C01p48980 Brassica napus HOM05D002776 ORTHO05D003542 4.3e-22 107.5 51 96.1
C04p36700 Brassica napus HOM05D002776 ORTHO05D011320 4.3e-22 107.5 51 96.1
C04p41830 Brassica napus HOM05D002776 ORTHO05D000395 4.3e-22 107.5 51 96.1
BolC3t18858H Brassica oleracea HOM05D002776 ORTHO05D000395 4.3e-22 107.5 51 96.1
BcaC07g39108 Brassica carinata HOM05D002776 ORTHO05D000395 5.6e-22 107.1 51 96.1
C06p18050 Brassica napus HOM05D002776 ORTHO05D000395 7.3e-22 106.7 51 96.1
A01p26310 Brassica napus HOM05D002776 ORTHO05D011320 9.6e-22 106.3 51 96.1
C01p30580 Brassica napus HOM05D002776 ORTHO05D003044 1.2e-21 105.9 51 96.1
C03p44570 Brassica napus HOM05D002776 ORTHO05D011320 1.2e-21 105.9 51 96.1
C03p66380 Brassica napus HOM05D002776 ORTHO05D003044 1.6e-21 105.5 51 94.1
BraA03t15291Z Brassica rapa HOM05D002776 ORTHO05D000395 2.1e-21 105.1 51 94.1
BraA08t32835Z Brassica rapa HOM05D002776 ORTHO05D011320 2.8e-21 104.8 51 94.1
C03p65980 Brassica napus HOM05D002776 ORTHO05D003044 3.6e-21 104.4 51 94.1
C04p56090 Brassica napus HOM05D002776 ORTHO05D003044 3.6e-21 104.4 51 94.1
A03p65940 Brassica napus HOM05D002776 ORTHO05D003044 4.7e-21 104.0 51 94.1
BraA09t40150Z Brassica rapa HOM05D002776 ORTHO05D011320 4.7e-21 104.0 51 94.1
BcaC06g36687 Brassica carinata HOM05D002776 ORTHO05D011320 1.1e-20 102.8 51 94.1
BcaC08g44059 Brassica carinata HOM05D002776 ORTHO05D011320 1.8e-20 102.1 49 95.9
A08p07570 Brassica napus HOM05D002776 ORTHO05D011320 1.8e-20 102.1 51 92.2
BcaB02g11313 Brassica carinata HOM05D002776 ORTHO05D000395 3.1e-20 101.3 51 92.2
BcaB03g16296 Brassica carinata HOM05D002776 ORTHO05D000395 3.1e-20 101.3 51 92.2
A01p20490 Brassica napus HOM05D002776 ORTHO05D000395 4.0e-20 100.9 50 94.0
A05p28380 Brassica napus HOM05D002776 ORTHO05D003044 4.0e-20 100.9 51 92.2
BcaB03g15955 Brassica carinata HOM05D002776 ORTHO05D011320 8.9e-20 99.8 51 90.2
BcaB04g18118 Brassica carinata HOM05D002776 ORTHO05D000395 8.9e-20 99.8 51 90.2
BcaB05g23247 Brassica carinata HOM05D002776 ORTHO05D011320 8.9e-20 99.8 51 90.2
BcaB08g35015 Brassica carinata HOM05D002776 ORTHO05D011320 8.9e-20 99.8 51 88.2
BcaC05g26787 Brassica carinata HOM05D002776 ORTHO05D011320 8.9e-20 99.8 56 83.9
BcaB07g33753 Brassica carinata HOM05D002776 ORTHO05D011320 3.4e-19 97.8 51 90.2
A10p06580 Brassica napus HOM05D002776 ORTHO05D000395 4.4e-19 97.4 51 90.2
C07p49090 Brassica napus HOM05D002776 ORTHO05D003044 4.4e-19 97.4 51 90.2
BcaB06g26484 Brassica carinata HOM05D002776 ORTHO05D000395 7.6e-19 96.7 51 88.2
BcaB02g06428 Brassica carinata HOM05D002776 ORTHO05D011320 9.9e-19 96.3 51 88.2
BcaB07g33087 Brassica carinata HOM05D002776 ORTHO05D011320 1.1e-17 92.8 53 84.9
BcaC06g33588 Brassica carinata HOM05D002776 ORTHO05D011320 5.4e-17 90.5 51 84.3
BcaB01g01630 Brassica carinata HOM05D002776 ORTHO05D011320 8.7e-15 83.2 48 83.3
BcaB01g04536 Brassica carinata HOM05D002776 ORTHO05D011320 9.0e-12 73.2 35 94.3
BcaC09g48965 Brassica carinata HOM05D002776 ORTHO05D003044 4.5e-11 70.9 49 69.4
BcaB01g01307 Brassica carinata HOM05D002776 ORTHO05D003044 7.6e-11 70.1 46 71.7
BcaB03g16806 Brassica carinata HOM05D002776 ORTHO05D003044 7.6e-11 70.1 49 67.3
BcaC04g22429 Brassica carinata HOM05D002776 ORTHO05D011320 9.9e-11 69.7 49 69.4
BraA08t32607Z Brassica rapa HOM05D002776 ORTHO05D000395 9.9e-11 69.7 35 91.4
BcaC06g36448 Brassica carinata HOM05D002776 ORTHO05D003044 1.3e-10 69.3 34 91.2
BcaB05g22944 Brassica carinata HOM05D002776 ORTHO05D000395 2.9e-10 68.2 52 67.3
C01p34330 Brassica napus HOM05D001224 ORTHO05D023838 1.3e-07 59.3 51 54.9
BolC1t03403H Brassica oleracea HOM05D001224 ORTHO05D023838 1.3e-07 59.3 51 54.9
BcaB06g27029 Brassica carinata HOM05D002776 ORTHO05D011320 1.8e-07 58.9 49 65.3
BcaB05g23078 Brassica carinata HOM05D002776 ORTHO05D011320 2.5e-06 55.1 33 75.8
BcaB06g27856 Brassica carinata HOM05D002776 ORTHO05D003044 4.3e-06 54.3 29 79.3
C05p44730 Brassica napus HOM05D002776 ORTHO05D000395 4.3e-06 54.3 25 96.0


User provided reference genes

Program Settings