Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG7G4330 Aethionema arabicum HOM05D005591 ORTHO05D007131 2.6e-26 121.3 63 100.0
AL1G32520 Arabidopsis lyrata HOM05D005591 ORTHO05D007131 2.6e-26 121.3 63 100.0
AT1G19800 Arabidopsis thaliana HOM05D005591 ORTHO05D007131 2.6e-26 121.3 63 100.0
BcaB03g12900 Brassica carinata HOM05D005591 ORTHO05D007131 2.6e-26 121.3 63 100.0
BcaB07g31994 Brassica carinata HOM05D005591 ORTHO05D007131 2.6e-26 121.3 63 100.0
BcaC05g25857 Brassica carinata HOM05D005591 ORTHO05D007131 2.6e-26 121.3 63 100.0
BcaC07g38997 Brassica carinata HOM05D005591 ORTHO05D007131 2.6e-26 121.3 63 100.0
A06p15920 Brassica napus HOM05D005591 ORTHO05D007131 2.6e-26 121.3 63 100.0
C05p18230 Brassica napus HOM05D005591 ORTHO05D007131 2.6e-26 121.3 63 100.0
C08p19710 Brassica napus HOM05D005591 ORTHO05D007131 2.6e-26 121.3 63 100.0
BolC5t30530H Brassica oleracea HOM05D005591 ORTHO05D007131 2.6e-26 121.3 63 100.0
BolC8t49608H Brassica oleracea HOM05D005591 ORTHO05D007131 2.6e-26 121.3 63 100.0
BraA06t24698Z Brassica rapa HOM05D005591 ORTHO05D007131 2.6e-26 121.3 63 100.0
Carub.0001s1933 Capsella rubella HOM05D005591 ORTHO05D007131 2.6e-26 121.3 63 100.0
CARHR020310 Cardamine hirsuta HOM05D005591 ORTHO05D007131 2.6e-26 121.3 63 100.0
Thhalv10008071m.g Eutrema salsugineum HOM05D005591 ORTHO05D007131 2.6e-26 121.3 63 100.0
Sp1g17610 Schrenkiella parvula HOM05D005591 ORTHO05D007131 2.6e-26 121.3 63 100.0
THA.LOC104827705 Tarenaya hassleriana HOM05D005591 ORTHO05D007131 2.5e-24 114.8 63 93.7
EL10Ac9g21576 Beta vulgaris HOM05D005591 ORTHO05D007131 1.2e-23 112.5 63 88.9
Peaxi162Scf00673g00002 Petunia axillaris HOM05D005591 ORTHO05D007131 2.1e-23 111.7 63 88.9
ClCG08G003960 Citrullus lanatus HOM05D005591 ORTHO05D007131 2.7e-23 111.3 62 83.9
CsaV3_6G003160 Cucumis sativus L. HOM05D005591 ORTHO05D007131 2.7e-23 111.3 63 85.7
Nitab4.5_0006072g0030 Nicotiana tabacum HOM05D005591 ORTHO05D007131 2.7e-23 111.3 63 90.5
CANSAT78G0984 Cannabis sativa HOM05D005591 ORTHO05D007131 4.6e-23 110.5 63 87.3
Sabra02G0178800 Salix brachista HOM05D005591 ORTHO05D007131 6.0e-23 110.2 63 88.9
CSS0046220 Camellia sinensis var. sinensis HOM05D005591 ORTHO05D007131 7.9e-23 109.8 63 88.9
AUR62010234 Chenopodium quinoa HOM05D005591 ORTHO05D007131 7.9e-23 109.8 63 85.7
AUR62013219 Chenopodium quinoa HOM05D005591 ORTHO05D007131 7.9e-23 109.8 63 85.7
Nitab4.5_0000368g0340 Nicotiana tabacum HOM05D005591 ORTHO05D007131 7.9e-23 109.8 63 88.9
Sed0000259 Sechium edule HOM05D005591 ORTHO05D007131 7.9e-23 109.8 63 84.1
Dinv27163 Davidia involucrata HOM05D005591 ORTHO05D007131 1.0e-22 109.4 63 88.9
CAN.G1648.2 Capsicum annuum HOM05D005591 ORTHO05D007131 1.3e-22 109.0 63 87.3
TAR375G0642 Trochodendron aralioides HOM05D005591 ORTHO05D007131 1.3e-22 109.0 63 85.7
Ciclev10020911m.g Citrus clementina HOM05D005591 ORTHO05D007131 1.8e-22 108.6 63 87.3
Haze_05998 Corylus avellana HOM05D005591 ORTHO05D007131 1.8e-22 108.6 63 87.3
Haze_12970 Corylus avellana HOM05D005591 ORTHO05D007131 1.8e-22 108.6 63 87.3
MELO3C011502.2 Cucumis melo HOM05D005591 ORTHO05D007131 1.8e-22 108.6 63 85.7
PGR083G2576 Punica granatum HOM05D005591 ORTHO05D007131 1.8e-22 108.6 63 87.3
Migut.D00413 Erythranthe guttata HOM05D005591 ORTHO05D007131 2.3e-22 108.2 63 87.3
Oeu061431.3 Olea europaea HOM05D005591 ORTHO05D007131 2.3e-22 108.2 63 87.3
PGSC0003DMG402024734 Solanum tuberosum HOM05D005591 ORTHO05D007131 2.3e-22 108.2 63 85.7
SGA_v2.0_scaffold1G00602 Striga asiatica HOM05D005591 ORTHO05D002031 2.3e-22 108.2 63 87.3
unitig_22.g5461 Utricularia gibba HOM05D005591 ORTHO05D007131 2.3e-22 108.2 63 88.9
Cfa014468 Carpinus fangiana HOM05D005591 ORTHO05D007131 3.0e-22 107.8 63 87.3
QL05p063015 Quercus lobata HOM05D005591 ORTHO05D007131 3.0e-22 107.8 62 87.1
Solyc01g100250.3 Solanum lycopersicum HOM05D005591 ORTHO05D007131 3.0e-22 107.8 63 85.7
MSTRG.18314 Avicennia marina HOM05D005591 ORTHO05D007131 3.9e-22 107.5 63 85.7
CAN.G1273.6 Capsicum annuum HOM05D005591 ORTHO05D007131 3.9e-22 107.5 62 85.5
Glyma.20G208100 Glycine max HOM05D005591 ORTHO05D007131 3.9e-22 107.5 63 85.7
Lalb_Chr12g0205911 Lupinus albus HOM05D005591 ORTHO05D007131 3.9e-22 107.5 63 85.7
Potri.002G234400 Populus trichocarpa HOM05D005591 ORTHO05D007131 3.9e-22 107.5 63 85.7
Ca_26812_v3 Cicer arietinum L. HOM05D005591 ORTHO05D007131 5.1e-22 107.1 63 84.1
Lalb_Chr12g0209371 Lupinus albus HOM05D005591 ORTHO05D007131 5.1e-22 107.1 63 84.1
VMungo0720G0134 Vigna mungo HOM05D005591 ORTHO05D007131 5.1e-22 107.1 63 84.1
Actinidia35920 Actinidia chinensis HOM05D005591 ORTHO05D007131 6.7e-22 106.7 63 84.1
Glyma.10G181900 Glycine max HOM05D005591 ORTHO05D007131 6.7e-22 106.7 63 82.5
Lj3g0022648 Lotus japonicus HOM05D005591 ORTHO05D007131 6.7e-22 106.7 63 84.1
Phvul.008G142801 Phaseolus vulgaris HOM05D005591 ORTHO05D007131 6.7e-22 106.7 63 84.1
SGA_v2.0_scaffold90G27691 Striga asiatica HOM05D005591 ORTHO05D007131 6.7e-22 106.7 63 85.7
TWI60G1035 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 6.7e-22 106.7 63 84.1
ClCG00G002040 Citrullus lanatus HOM05D005591 ORTHO05D007131 8.7e-22 106.3 60 85.0
Sc08g0001750 Simmondsia chinensis HOM05D005591 ORTHO05D007131 8.7e-22 106.3 63 85.7
Medtr3g005100 Medicago truncatula HOM05D005591 ORTHO05D007131 1.1e-21 105.9 62 85.5
Atru.chr7.136 Acer truncatum HOM05D005591 ORTHO05D007131 1.5e-21 105.5 61 83.6
Duzib212G0264 Durio zibethinus HOM05D005591 ORTHO05D007131 1.5e-21 105.5 63 84.1
Gohir.A10G133200 Gossypium hirsutum HOM05D005591 ORTHO05D007131 1.5e-21 105.5 63 84.1
Gohir.D10G133600 Gossypium hirsutum HOM05D005591 ORTHO05D007131 1.5e-21 105.5 63 84.1
Gorai.011G147400 Gossypium raimondii HOM05D005591 ORTHO05D007131 1.5e-21 105.5 63 84.1
Hund00109 Selenicereus undatus HOM05D005591 ORTHO05D007131 1.5e-21 105.5 63 84.1
Thecc.04G188000 Theobroma cacao HOM05D005591 ORTHO05D007131 1.5e-21 105.5 63 84.1
TPR.G25529 Trifolium pratense HOM05D005591 ORTHO05D007131 1.5e-21 105.5 63 82.5
arahy.Tifrunner.gnm1.ann1.8VB164 Arachis hypogaea HOM05D005591 ORTHO05D007131 1.9e-21 105.1 63 81.0
arahy.Tifrunner.gnm1.ann1.ZABD6C Arachis hypogaea HOM05D005591 ORTHO05D007131 1.9e-21 105.1 63 81.0
Duzib151G0749 Durio zibethinus HOM05D005591 ORTHO05D007131 1.9e-21 105.1 63 82.5
CiPaw.01G109900 Carya illinoinensis HOM05D005591 ORTHO05D007131 2.5e-21 104.8 63 82.5
FvH4_3g16560 Fragaria vesca HOM05D005591 ORTHO05D007131 2.5e-21 104.8 59 88.1
FAN11G3688 Fragaria x ananassa HOM05D005591 ORTHO05D007131 2.5e-21 104.8 59 88.1
FAN16G2920 Fragaria x ananassa HOM05D005591 ORTHO05D007131 2.5e-21 104.8 59 88.1
FAN21G2901 Fragaria x ananassa HOM05D005591 ORTHO05D007131 2.5e-21 104.8 59 88.1
FAN25G3010 Fragaria x ananassa HOM05D005591 ORTHO05D007131 2.5e-21 104.8 59 88.1
Hma1.2p1_0349F.1_g132330 Hydrangea macrophylla HOM05D005591 ORTHO05D007131 2.5e-21 104.8 63 82.5
Psat5g221840 Pisum sativum HOM05D005591 ORTHO05D007131 2.5e-21 104.8 62 83.9
RcHm_v2.0_Chr5g0027591 Rosa chinensis HOM05D005591 ORTHO05D007131 2.5e-21 104.8 59 88.1
TPR.G37202 Trifolium pratense HOM05D005591 ORTHO05D007131 2.5e-21 104.8 63 82.5
Manes.16G070000 Manihot esculenta HOM05D005591 ORTHO05D007131 3.3e-21 104.4 63 84.1
Rhsim02G0070200 Rhododendron simsii HOM05D005591 ORTHO05D007131 5.7e-21 103.6 60 88.3
SalBow4G1474 Salvia bowleyana HOM05D005591 ORTHO05D007131 5.7e-21 103.6 63 82.5
SalBow4G1598 Salvia bowleyana HOM05D005591 ORTHO05D007131 5.7e-21 103.6 63 82.5
ECA232G4773 Erigeron canadensis HOM05D005591 ORTHO05D007131 7.4e-21 103.2 60 88.3
Lj2P1154T29 Lonicera japonica HOM05D005591 ORTHO05D007131 7.4e-21 103.2 63 84.1
Medtr3g008040 Medicago truncatula HOM05D005591 ORTHO05D007131 7.4e-21 103.2 62 82.3
PSO063G3984 Papaver somniferum HOM05D005591 ORTHO05D007131 7.4e-21 103.2 62 80.6
PSO339G5872 Papaver somniferum HOM05D005591 ORTHO05D007131 7.4e-21 103.2 62 80.6
TWI34G1086 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 7.4e-21 103.2 63 81.0
GSVIVG01031642001 Vitis vinifera HOM05D005591 ORTHO05D007131 7.4e-21 103.2 62 83.9
Gorai.006G226400 Gossypium raimondii HOM05D005591 ORTHO05D007131 9.6e-21 102.8 63 81.0
HanXRQChr10g0315741 Helianthus annuus HOM05D005591 ORTHO05D007131 9.6e-21 102.8 60 88.3
Lsat_1_v5_gn_1_5881 Lactuca sativa HOM05D005591 ORTHO05D007131 9.6e-21 102.8 60 85.0
SHI22008 Sapria himalayana HOM05D005591 ORTHO05D007131 9.6e-21 102.8 62 77.4
Prupe.4G148300 Prunus persica HOM05D005591 ORTHO05D007131 2.1e-20 101.7 59 86.4
Gohir.D09G202500 Gossypium hirsutum HOM05D005591 ORTHO05D007131 3.7e-20 100.9 63 81.0
Cc11_g03530 Coffea canephora HOM05D005591 ORTHO05D007131 4.8e-20 100.5 60 85.0
DCAR_018469 Daucus carota HOM05D005591 ORTHO05D007131 4.8e-20 100.5 63 77.8
DCAR_018470 Daucus carota HOM05D005591 ORTHO05D007131 4.8e-20 100.5 63 77.8
MD05G1209200 Malus domestica HOM05D005591 ORTHO05D007131 4.8e-20 100.5 59 86.4
Nn3g18591 Nelumbo nucifera HOM05D005591 ORTHO05D007131 4.8e-20 100.5 63 79.4
Zm00001eb074560 Zea mays HOM05D005591 ORTHO05D007131 6.3e-20 100.1 59 86.4
Eucgr.E02433 Eucalyptus grandis HOM05D005591 ORTHO05D007131 8.2e-20 99.8 59 84.7
Os04g0553000 Oryza sativa ssp. japonica HOM05D005591 ORTHO05D007131 8.2e-20 99.8 59 84.7
ATR0681G262 Amborella trichopoda HOM05D005591 ORTHO05D007131 1.1e-19 99.4 62 80.6
CDE11G0925 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 1.1e-19 99.4 62 80.6
Gohir.A09G209100 Gossypium hirsutum HOM05D005591 ORTHO05D007131 1.1e-19 99.4 63 79.4
CBR_g4088 Chara braunii HOM05D005591 ORTHO05D007131 1.8e-19 98.6 62 80.6
MD10G1195600 Malus domestica HOM05D005591 ORTHO05D007131 1.8e-19 98.6 59 84.7
CDE02G1973 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 2.4e-19 98.2 62 79.0
AagrBONN_evm.TU.Sc2ySwM_117.3947 Anthoceros agrestis HOM05D005591 ORTHO05D007131 9.0e-19 96.3 58 86.2
Aqoxy5G02725 Aquilegia oxysepala HOM05D005591 ORTHO05D007131 9.0e-19 96.3 62 77.4
CBR_g24384 Chara braunii HOM05D005591 ORTHO05D007131 1.5e-18 95.5 59 83.1
Mapoly0204s0010 Marchantia polymorpha HOM05D005591 ORTHO05D007131 2.0e-18 95.1 59 81.4
Pp3c1_16480 Physcomitrium patens HOM05D005591 ORTHO05D007131 2.0e-18 95.1 59 81.4
SMO367G0743 Selaginella moellendorffii HOM05D005591 ORTHO05D007131 2.6e-18 94.7 59 81.4
SEGI_17332 Sequoiadendron giganteum HOM05D005591 ORTHO05D007131 3.4e-18 94.4 59 81.4
MBI07_g20439_MAGBIO Magnolia biondii HOM05D005591 ORTHO05D007131 5.9e-18 93.6 59 76.3
Cre06.g268200 Chlamydomonas reinhardtii HOM05D005591 ORTHO05D007131 1.9e-16 88.6 59 74.6
PRCOL_00005194 Prasinoderma coloniale HOM05D005591 ORTHO05D007131 1.5e-13 79.0 63 66.7
MCO01G348 Micromonas commoda HOM05D005591 ORTHO05D007131 3.3e-13 77.8 51 72.5
Cpa.g.sc8.310 Carica papaya HOM05D005591 ORTHO05D007131 5.9e-10 67.0 38 86.8
COL.COLO4_08690 Corchorus olitorius HOM05D005591 ORTHO05D007131 5.0e-09 63.9 58 63.8


User provided reference genes

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