Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g25617 Brassica carinata HOM05D007307 ORTHO05D009190 2.9e-268 927.9 460 100.0
C05p14190 Brassica napus HOM05D007307 ORTHO05D009190 2.5e-267 924.9 460 99.8
A06p12000 Brassica napus HOM05D007307 ORTHO05D009190 3.4e-264 914.4 460 98.3
BraA06t24371Z Brassica rapa HOM05D007307 ORTHO05D009190 3.4e-264 914.4 460 98.3
BcaB02g06649 Brassica carinata HOM05D007307 ORTHO05D009190 8.9e-257 889.8 460 95.7
Sp1g14290 Schrenkiella parvula HOM05D007307 ORTHO05D009190 2.7e-245 851.7 460 91.3
Thhalv10007586m.g Eutrema salsugineum HOM05D007307 ORTHO05D009190 3.0e-244 848.2 459 90.6
Carub.0001s1578 Capsella rubella HOM05D007307 ORTHO05D009190 3.6e-242 841.3 461 89.6
AL1G28140 Arabidopsis lyrata HOM05D007307 ORTHO05D009190 2.0e-240 835.5 461 88.9
AT1G15980 Arabidopsis thaliana HOM05D007307 ORTHO05D009190 7.6e-240 833.6 460 88.5
CARHR016480 Cardamine hirsuta HOM05D007307 ORTHO05D009190 1.9e-238 828.9 460 88.5
Aa31LG7G560 Aethionema arabicum HOM05D007307 ORTHO05D009190 2.4e-230 802.0 460 85.4
THA.LOC104813590 Tarenaya hassleriana HOM05D007307 ORTHO05D009190 1.2e-221 773.1 460 82.4
Thecc.06G041700 Theobroma cacao HOM05D007307 ORTHO05D009190 4.5e-200 701.4 460 76.3
Cpa.g.sc10.77 Carica papaya HOM05D007307 ORTHO05D009190 3.8e-199 698.4 469 73.8
Duzib192G1050 Durio zibethinus HOM05D007307 ORTHO05D009190 3.8e-199 698.4 460 76.3
BolC5t30150H Brassica oleracea HOM05D007307 ORTHO05D009190 1.1e-198 696.8 340 99.4
Manes.04G102400 Manihot esculenta HOM05D007307 ORTHO05D009190 4.3e-195 684.9 462 74.0
Gorai.009G123800 Gossypium raimondii HOM05D007307 ORTHO05D009190 5.7e-195 684.5 464 74.4
Gohir.D05G120300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 2.2e-194 682.6 464 74.1
QL05p036096 Quercus lobata HOM05D007307 ORTHO05D009190 8.2e-194 680.6 467 71.9
Atru.chr10.2412 Acer truncatum HOM05D007307 ORTHO05D009190 9.0e-193 677.2 465 73.3
CiPaw.02G162300 Carya illinoinensis HOM05D007307 ORTHO05D009190 1.2e-192 676.8 465 73.1
Ciclev10025544m.g Citrus clementina HOM05D007307 ORTHO05D009190 1.0e-191 673.7 470 71.1
RcHm_v2.0_Chr2g0132981 Rosa chinensis HOM05D007307 ORTHO05D009190 5.0e-191 671.4 465 71.4
ClCG09G003340 Citrullus lanatus HOM05D007307 ORTHO05D009190 1.1e-190 670.2 471 72.0
Eucgr.F03957 Eucalyptus grandis HOM05D007307 ORTHO05D009190 1.9e-190 669.5 459 72.3
FAN05G4298 Fragaria x ananassa HOM05D007307 ORTHO05D009190 1.9e-190 669.5 465 71.2
Prupe.3G098200 Prunus persica HOM05D007307 ORTHO05D009190 4.2e-190 668.3 457 72.9
CsaV3_7G031890 Cucumis sativus L. HOM05D007307 ORTHO05D009190 1.2e-189 666.8 444 73.4
FvH4_6g28640 Fragaria vesca HOM05D007307 ORTHO05D009190 1.2e-189 666.8 465 71.4
Ca_20542_v3 Cicer arietinum L. HOM05D007307 ORTHO05D009190 2.1e-189 666.0 414 76.3
MELO3C023468.2 Cucumis melo HOM05D007307 ORTHO05D009190 2.1e-189 666.0 411 77.6
Glyma.08G218800 Glycine max HOM05D007307 ORTHO05D009190 4.6e-189 664.8 467 70.7
FAN14G3907 Fragaria x ananassa HOM05D007307 ORTHO05D009190 6.1e-189 664.5 465 71.2
MSTRG.11181 Avicennia marina HOM05D007307 ORTHO05D009190 1.4e-188 663.3 470 70.9
FAN09G0915 Fragaria x ananassa HOM05D007307 ORTHO05D009190 5.1e-188 661.4 465 71.0
CDE04G0143 Ceratophyllum demersum HOM05D007307 ORTHO05D009190 6.7e-188 661.0 464 70.9
MD17G1223300 Malus domestica HOM05D007307 ORTHO05D009190 8.8e-188 660.6 457 72.2
GSVIVG01015957001 Vitis vinifera HOM05D007307 ORTHO05D009190 5.7e-187 657.9 461 70.9
Medtr4g007080 Medicago truncatula HOM05D007307 ORTHO05D009190 7.4e-187 657.5 425 74.6
Peaxi162Scf00332g00525 Petunia axillaris HOM05D007307 ORTHO05D009190 7.4e-187 657.5 459 71.2
TAR625G0746 Trochodendron aralioides HOM05D007307 ORTHO05D009190 9.7e-187 657.1 466 71.0
Haze_16668 Corylus avellana HOM05D007307 ORTHO05D009190 1.3e-186 656.8 476 70.2
Lj5A80T58 Lonicera japonica HOM05D007307 ORTHO05D009190 1.3e-186 656.8 459 71.9
Lj3g0010338 Lotus japonicus HOM05D007307 ORTHO05D009190 1.3e-186 656.8 421 75.8
Nn2g12391 Nelumbo nucifera HOM05D007307 ORTHO05D009190 2.8e-186 655.6 414 76.3
Cc04_g05100 Coffea canephora HOM05D007307 ORTHO05D009190 3.7e-186 655.2 463 70.2
Psat7g260240 Pisum sativum HOM05D007307 ORTHO05D009190 6.3e-186 654.4 467 69.0
Glyma.07G023000 Glycine max HOM05D007307 ORTHO05D009190 1.4e-185 653.3 461 70.5
Sopen03g035800 Solanum pennellii HOM05D007307 ORTHO05D009190 4.1e-185 651.7 452 71.5
TPR.G23084 Trifolium pratense HOM05D007307 ORTHO05D009190 6.9e-185 651.0 467 69.2
Nitab4.5_0002568g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 1.2e-184 650.2 468 69.7
TWI18G0485 Tripterygium wilfordii HOM05D007307 ORTHO05D009190 1.2e-184 650.2 461 69.6
Solyc03g116870.3 Solanum lycopersicum HOM05D007307 ORTHO05D009190 1.5e-184 649.8 452 71.5
AUR62026998 Chenopodium quinoa HOM05D007307 ORTHO05D009190 2.0e-184 649.4 458 70.3
Sed0012177 Sechium edule HOM05D007307 ORTHO05D009190 3.4e-184 648.7 447 71.8
Nitab4.5_0012161g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 7.7e-184 647.5 468 69.2
Lalb_Chr25g0278871 Lupinus albus HOM05D007307 ORTHO05D009190 1.0e-183 647.1 457 70.9
Potri.001G044300 Populus trichocarpa HOM05D007307 ORTHO05D009190 1.0e-183 647.1 469 70.4
CSS0015248 Camellia sinensis var. sinensis HOM05D007307 ORTHO05D009190 2.9e-183 645.6 445 71.7
Phvul.010G161300 Phaseolus vulgaris HOM05D007307 ORTHO05D009190 5.0e-183 644.8 460 71.1
PGSC0003DMG400019823 Solanum tuberosum HOM05D007307 ORTHO05D009190 8.5e-183 644.0 455 69.9
Actinidia25480 Actinidia chinensis HOM05D007307 ORTHO05D009190 1.4e-182 643.3 463 70.0
AUR62030838 Chenopodium quinoa HOM05D007307 ORTHO05D009190 5.5e-182 641.3 466 68.7
Migut.I00693 Erythranthe guttata HOM05D007307 ORTHO05D009190 1.6e-181 639.8 466 68.2
CAN.G407.66 Capsicum annuum HOM05D007307 ORTHO05D009190 6.1e-181 637.9 461 70.3
CANSAT56G3714 Cannabis sativa HOM05D007307 ORTHO05D009190 2.3e-180 636.0 485 66.0
HanXRQChr08g0235871 Helianthus annuus HOM05D007307 ORTHO05D009190 2.3e-180 636.0 468 66.9
Lsat_1_v5_gn_5_8240 Lactuca sativa HOM05D007307 ORTHO05D009190 2.0e-179 632.9 468 67.3
EL10Ac3g06300 Beta vulgaris HOM05D007307 ORTHO05D009190 3.3e-179 632.1 453 68.9
Aqoxy7G01916 Aquilegia oxysepala HOM05D007307 ORTHO05D009190 2.8e-178 629.0 465 68.0
VMungo0331G1235 Vigna mungo HOM05D007307 ORTHO05D009190 2.8e-178 629.0 414 73.2
SalBow7G3293 Salvia bowleyana HOM05D007307 ORTHO05D009190 8.2e-178 627.5 460 68.9
FAN02G3759 Fragaria x ananassa HOM05D007307 ORTHO05D009190 1.1e-177 627.1 407 74.4
ECA246G2038 Erigeron canadensis HOM05D007307 ORTHO05D009190 5.3e-177 624.8 466 65.7
Rhsim08G0205700 Rhododendron simsii HOM05D007307 ORTHO05D009190 1.2e-176 623.6 495 66.5
unitig_52.g17476 Utricularia gibba HOM05D007307 ORTHO05D009190 1.6e-176 623.2 452 68.6
ATR0739G128 Amborella trichopoda HOM05D007307 ORTHO05D009190 2.0e-176 622.9 414 73.2
Sabra01G0030600 Salix brachista HOM05D007307 ORTHO05D009190 5.9e-176 621.3 512 64.3
PSO170G4955 Papaver somniferum HOM05D007307 ORTHO05D009190 2.9e-175 619.0 461 66.8
arahy.Tifrunner.gnm1.ann1.X6E8D2 Arachis hypogaea HOM05D007307 ORTHO05D009190 2.5e-174 615.9 475 65.7
PSO017G5597 Papaver somniferum HOM05D007307 ORTHO05D009190 2.5e-174 615.9 461 66.4
Oeu051583.2 Olea europaea HOM05D007307 ORTHO05D009190 1.5e-171 606.7 396 74.7
Hma1.2p1_0109F.1_g052560 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 1.3e-170 603.6 460 67.2
Zm00001eb176730 Zea mays HOM05D007307 ORTHO05D009190 4.1e-161 572.0 411 64.7
Dinv23284 Davidia involucrata HOM05D007307 ORTHO05D009190 7.0e-161 571.2 382 73.0
DCAR_017649 Daucus carota HOM05D007307 ORTHO05D009190 2.0e-160 569.7 411 68.1
Gohir.A05G119300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 1.7e-159 566.6 384 73.4
Zm00001eb412420 Zea mays HOM05D007307 ORTHO05D009190 3.8e-159 565.5 411 64.5
Os08g0276100 Oryza sativa ssp. japonica HOM05D007307 ORTHO05D009190 2.5e-158 562.8 413 64.2
arahy.Tifrunner.gnm1.ann1.DFM3I4 Arachis hypogaea HOM05D007307 ORTHO05D009190 4.1e-145 518.8 475 58.9
COL.COLO4_26702 Corchorus olitorius HOM05D007307 ORTHO05D009190 5.4e-145 518.5 325 79.4
Ah.01g006960 Amaranthus hybridus HOM05D007307 ORTHO05D009190 7.3e-126 454.9 452 55.3
SMO364G0491 Selaginella moellendorffii HOM05D007307 ORTHO05D009190 2.8e-117 426.4 401 52.9
AagrBONN_evm.TU.Sc2ySwM_344.2748 Anthoceros agrestis HOM05D007307 ORTHO05D009190 6.2e-117 425.2 436 52.5
Pp3c9_19250 Physcomitrium patens HOM05D007307 ORTHO05D009190 8.9e-116 421.4 411 52.3
Pp3c15_23280 Physcomitrium patens HOM05D007307 ORTHO05D009190 3.2e-113 412.9 410 51.7
Mapoly0114s0017 Marchantia polymorpha HOM05D007307 ORTHO05D009190 5.8e-107 392.1 408 50.0
CBR_g34729 Chara braunii HOM05D007307 ORTHO05D009190 4.6e-96 355.9 415 45.8
Hma1.2p1_0109F.1_g052570 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 8.8e-71 271.9 193 68.9
Hund06518 Selenicereus undatus HOM05D007307 ORTHO05D009190 8.5e-66 255.4 187 68.4
SEGI_02712 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 1.4e-63 248.1 203 61.6
SEGI_37660 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 1.4e-63 248.1 203 61.6
SEGI_25940 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 1.3e-50 204.9 147 63.3
Actinidia18248 Actinidia chinensis HOM05D007307 ORTHO05D009190 1.1e-23 115.5 88 65.9
Lj5A80T54 Lonicera japonica HOM05D007307 ORTHO05D009190 3.2e-20 104.0 62 79.0


User provided reference genes

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