Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g25551 Brassica carinata HOM05D009829 ORTHO05D012418 5.7e-49 197.2 95 100.0
C05p15270 Brassica napus HOM05D009829 ORTHO05D012418 1.2e-46 189.5 95 95.8
A06p12860 Brassica napus HOM05D009829 ORTHO05D012418 2.6e-46 188.3 95 94.7
BraA06t24446Z Brassica rapa HOM05D009829 ORTHO05D012418 2.6e-46 188.3 95 94.7
BcaB02g06660 Brassica carinata HOM05D009829 ORTHO05D012418 2.1e-43 178.7 95 90.5
BcaB02g06661 Brassica carinata HOM05D009829 ORTHO05D012418 2.1e-43 178.7 95 90.5
Sp1g15090 Schrenkiella parvula HOM05D009829 ORTHO05D012418 7.7e-38 160.2 96 84.4
BolC5t30233H Brassica oleracea HOM05D009829 ORTHO05D012418 5.0e-37 157.5 76 97.4
BcaC07g41449 Brassica carinata HOM05D009829 ORTHO05D012418 7.9e-35 150.2 95 81.1
Thhalv10009335m.g Eutrema salsugineum HOM05D009829 ORTHO05D012418 1.0e-34 149.8 95 78.9
BcaB03g13023 Brassica carinata HOM05D009829 ORTHO05D012418 3.0e-34 148.3 95 77.9
A08p31200 Brassica napus HOM05D009829 ORTHO05D012418 2.0e-33 145.6 95 75.8
AL1G29130 Arabidopsis lyrata HOM05D009829 ORTHO05D012418 2.6e-33 145.2 95 76.8
BcaC07g38826 Brassica carinata HOM05D009829 ORTHO05D012418 7.4e-33 143.7 95 74.7
Carub.0001s1668 Capsella rubella HOM05D009829 ORTHO05D012418 7.4e-33 143.7 95 77.9
C08p17660 Brassica napus HOM05D009829 ORTHO05D012418 9.7e-33 143.3 95 74.7
BolC8t49391H Brassica oleracea HOM05D009829 ORTHO05D012418 9.7e-33 143.3 95 74.7
BraA08t35043Z Brassica rapa HOM05D009829 ORTHO05D012418 1.7e-32 142.5 95 73.7
AT1G16950 Arabidopsis thaliana HOM05D009829 ORTHO05D012418 4.8e-32 141.0 95 75.8
C08p44170 Brassica napus HOM05D009829 ORTHO05D000015 7.0e-31 137.1 83 80.7
BolC8t51964H Brassica oleracea HOM05D009829 ORTHO05D000015 7.0e-31 137.1 83 80.7
A09p60670 Brassica napus HOM05D009829 ORTHO05D000015 9.1e-31 136.7 83 79.5
BraA09t41438Z Brassica rapa HOM05D009829 ORTHO05D000015 9.1e-31 136.7 83 79.5
CARHR017460 Cardamine hirsuta HOM05D009829 ORTHO05D012418 6.5e-29 130.6 95 70.5
Aa31LG7G1380 Aethionema arabicum HOM05D009829 ORTHO05D012418 1.9e-20 102.4 64 76.6
THA.LOC109116623 Tarenaya hassleriana HOM05D009829 ORTHO05D012418 4.4e-09 64.7 95 45.3
CAN.G411.50 Capsicum annuum HOM05D005059 ORTHO05D004248 3.7e-08 61.6 101 40.6
Nn3g21078 Nelumbo nucifera HOM05D005059 ORTHO05D004248 5.4e-07 57.8 95 44.2
Phvul.002G241108 Phaseolus vulgaris HOM05D005059 ORTHO05D004248 5.4e-07 57.8 98 40.8
PGSC0003DMG400028485 Solanum tuberosum HOM05D005059 ORTHO05D004248 7.0e-07 57.4 100 39.0
Sopen02g021130 Solanum pennellii HOM05D005059 ORTHO05D004248 1.2e-06 56.6 88 40.9
CSS0038855 Camellia sinensis var. sinensis HOM05D005059 ORTHO05D004248 2.0e-06 55.8 97 38.1
QL05p049931 Quercus lobata HOM05D005059 ORTHO05D004248 3.5e-06 55.1 61 52.5


User provided reference genes

Program Settings