Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g25549 Brassica carinata HOM05D000051 ORTHO05D000015 3.9e-73 278.1 145 100.0
C05p15180 Brassica napus HOM05D000051 ORTHO05D000015 1.2e-63 246.5 190 73.7
A06p12820 Brassica napus HOM05D000051 ORTHO05D000015 9.2e-59 230.3 190 70.0
Carub.0001s1667 Capsella rubella HOM05D000051 ORTHO05D000015 2.7e-42 175.6 196 55.1
BraA04t17308Z Brassica rapa HOM05D000051 ORTHO05D000015 3.9e-41 171.8 195 54.9
Sp1g15070 Schrenkiella parvula HOM05D000051 ORTHO05D000015 6.6e-41 171.0 195 54.9
A04p16760 Brassica napus HOM05D000051 ORTHO05D000015 1.9e-40 169.5 195 54.4
C05p15250 Brassica napus HOM05D000051 ORTHO05D000015 2.1e-39 166.0 194 53.6
AT1G16930 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 3.6e-39 165.2 195 51.8
A06p12850 Brassica napus HOM05D000051 ORTHO05D000015 4.8e-39 164.9 195 53.3
BraA06t24445Z Brassica rapa HOM05D000051 ORTHO05D000015 4.8e-39 164.9 195 53.3
BcaB02g06662 Brassica carinata HOM05D000051 ORTHO05D000015 6.2e-39 164.5 195 54.4
AL1G29120 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 8.1e-39 164.1 195 51.8
BolC5t30229H Brassica oleracea HOM05D000051 ORTHO05D000015 1.8e-38 162.9 194 53.1
BraA06t24444Z Brassica rapa HOM05D000051 ORTHO05D000015 7.6e-37 157.5 242 44.6
Thhalv10000884m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 7.6e-37 157.5 195 49.7
Aa31LG5G24210 Aethionema arabicum HOM05D000051 ORTHO05D000015 2.9e-36 155.6 195 48.7
BcaC05g25550 Brassica carinata HOM05D000051 ORTHO05D000015 2.9e-36 155.6 192 51.0
Aa31sc2022G10 Aethionema arabicum HOM05D000051 ORTHO05D000015 6.0e-34 147.9 197 46.2
Aa31LG7G1360 Aethionema arabicum HOM05D000051 ORTHO05D000015 7.9e-34 147.5 193 47.2
Thhalv10027523m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.9e-33 145.2 177 51.4
Aa31LG7G1370 Aethionema arabicum HOM05D000051 ORTHO05D000015 2.5e-32 142.5 192 46.4
A06p12840 Brassica napus HOM05D000051 ORTHO05D000015 2.5e-32 142.5 195 47.7
CARHR017440 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.7e-31 138.7 197 45.7
C05p15230 Brassica napus HOM05D000051 ORTHO05D000015 1.1e-30 137.1 197 48.2
A05p30910 Brassica napus HOM05D000051 ORTHO05D026859 1.4e-27 126.7 94 73.4
BcaB02g06663 Brassica carinata HOM05D000051 ORTHO05D000015 7.9e-26 120.9 186 46.2
Aa31LG7G1950 Aethionema arabicum HOM05D000051 ORTHO05D000015 3.0e-25 119.0 195 42.1
Sp4g03380 Schrenkiella parvula HOM05D000051 ORTHO05D000015 1.4e-22 110.2 139 47.5
Thhalv10000123m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.6e-21 105.9 169 42.6
BolC6t38685H Brassica oleracea HOM05D000051 ORTHO05D000015 1.2e-18 97.1 164 45.7
C06p35630 Brassica napus HOM05D000051 ORTHO05D000015 3.5e-18 95.5 164 45.7
C06p35620 Brassica napus HOM05D000051 ORTHO05D000015 3.9e-17 92.0 163 45.4
AT1G80470 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 8.7e-17 90.9 189 32.8
BolC8t51504H Brassica oleracea HOM05D000051 ORTHO05D000015 4.3e-16 88.6 188 37.2
AL2G41010 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 5.7e-16 88.2 187 33.2
C08p39320 Brassica napus HOM05D000051 ORTHO05D000015 5.7e-16 88.2 188 37.2
BcaC05g25548 Brassica carinata HOM05D000051 ORTHO05D000015 6.3e-15 84.7 78 59.0
A09p56340 Brassica napus HOM05D001862 ORTHO05D000015 6.3e-15 84.7 180 37.2
C05p15220 Brassica napus HOM05D000051 ORTHO05D000015 6.3e-15 84.7 83 60.2
BraA09t41029Z Brassica rapa HOM05D001862 ORTHO05D002133 6.3e-15 84.7 180 37.2
A09p46700 Brassica napus HOM05D000051 ORTHO05D000015 1.1e-14 84.0 191 38.2
BcaC08g45779 Brassica carinata HOM05D000051 ORTHO05D000015 3.1e-14 82.4 191 37.7
BcaC07g40938 Brassica carinata HOM05D000051 ORTHO05D000015 6.9e-14 81.3 178 37.1
BraA04t17103Z Brassica rapa HOM05D000051 ORTHO05D000015 3.4e-13 79.0 175 38.9
CARHR073990 Cardamine hirsuta HOM05D000051 ORTHO05D000015 5.9e-13 78.2 178 34.3
A04p14610 Brassica napus HOM05D017036 ORTHO05D018644 4.2e-11 72.0 162 36.4
AL8G28380 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.2e-10 70.5 81 50.6
BraA05t21933Z Brassica rapa HOM05D000051 ORTHO05D026859 1.2e-10 70.5 66 62.1
C06p35610 Brassica napus HOM05D000051 ORTHO05D000015 3.6e-10 68.9 74 55.4
BolC6t38682H Brassica oleracea HOM05D000051 ORTHO05D000015 3.6e-10 68.9 74 55.4
BraA10t43199Z Brassica rapa HOM05D000051 ORTHO05D000015 4.6e-10 68.6 146 38.4
BcaB03g15605 Brassica carinata HOM05D017036 ORTHO05D018644 6.1e-10 68.2 86 50.0
BcaC02g08955 Brassica carinata HOM05D000005 ORTHO05D000449 2.3e-09 66.2 93 45.2
C03p12450 Brassica napus HOM05D000051 ORTHO05D000015 2.3e-09 66.2 193 28.0
Carub.0008s1388 Capsella rubella HOM05D000051 ORTHO05D000015 2.3e-09 66.2 102 41.2
AL8G28350 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 5.1e-09 65.1 123 38.2
C05p15140 Brassica napus HOM05D000051 ORTHO05D000015 5.1e-09 65.1 60 56.7
BraA03t10391Z Brassica rapa HOM05D000051 ORTHO05D000015 5.1e-09 65.1 197 28.4
AL8G28900 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 6.7e-09 64.7 176 30.7
C03p12480 Brassica napus HOM05D000051 ORTHO05D000015 6.7e-09 64.7 125 37.6
Thhalv10013520m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 6.7e-09 64.7 199 28.6
AT1G60410 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 8.8e-09 64.3 162 33.3
CARHR190860 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.1e-08 63.9 110 39.1
Sp6g15230 Schrenkiella parvula HOM05D000051 ORTHO05D000015 1.5e-08 63.5 89 43.8
BraA09t41687Z Brassica rapa HOM05D000051 ORTHO05D000015 2.5e-08 62.8 191 26.7
AT5G27750 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 3.3e-08 62.4 191 25.1
BraA03t10394Z Brassica rapa HOM05D000051 ORTHO05D000015 3.3e-08 62.4 192 29.2
CARHR190910 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.3e-08 62.4 200 31.0
C08p46820 Brassica napus HOM05D000051 ORTHO05D000015 5.7e-08 61.6 190 26.8
Thhalv10001812m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 5.7e-08 61.6 82 41.5
AT5G53637 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 7.4e-08 61.2 123 34.1
AL2G39150 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.3e-07 60.5 123 33.3
BraA06t27198Z Brassica rapa HOM05D017036 ORTHO05D018644 1.3e-07 60.5 68 50.0
Carub.0004s0141 Capsella rubella HOM05D000051 ORTHO05D000015 1.3e-07 60.5 202 29.7
Carub.0005s1049 Capsella rubella HOM05D000051 ORTHO05D000015 1.3e-07 60.5 161 35.4
AL8G14520 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.7e-07 60.1 176 27.8
BolC3t13716H Brassica oleracea HOM05D000051 ORTHO05D000015 1.7e-07 60.1 116 33.6
AL2G16290 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.2e-07 59.7 162 32.1
AT5G53635 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 2.2e-07 59.7 107 38.3
BcaB02g06476 Brassica carinata HOM05D000051 ORTHO05D000015 2.2e-07 59.7 167 29.3
Thhalv10023781m.g Eutrema salsugineum HOM05D017036 ORTHO05D018644 2.2e-07 59.7 74 45.9
AL6G39170 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.8e-07 59.3 123 30.9
AL8G28580 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.8e-07 59.3 122 32.8
C09p43510 Brassica napus HOM05D000051 ORTHO05D000015 2.8e-07 59.3 194 30.4
Thhalv10015300m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.8e-07 59.3 83 44.6
A10p11070 Brassica napus HOM05D000051 ORTHO05D000015 3.7e-07 58.9 118 35.6
C05p41970 Brassica napus HOM05D000051 ORTHO05D000015 3.7e-07 58.9 188 30.9
C09p43550 Brassica napus HOM05D000051 ORTHO05D000015 3.7e-07 58.9 84 40.5
BolC3t13717H Brassica oleracea HOM05D000051 ORTHO05D000015 3.7e-07 58.9 112 33.9
BolC5t32931H Brassica oleracea HOM05D000051 ORTHO05D000015 3.7e-07 58.9 188 30.9
BolC9t57236H Brassica oleracea HOM05D000051 ORTHO05D000015 3.7e-07 58.9 194 30.4
Sp2g09770 Schrenkiella parvula HOM05D000051 ORTHO05D000015 3.7e-07 58.9 167 29.3
AL8G28500 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 4.8e-07 58.5 122 32.8
C03p18000 Brassica napus HOM05D000051 ORTHO05D000015 4.8e-07 58.5 127 33.9
AL8G28340 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 6.3e-07 58.2 86 41.9
AT3G23955 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 6.3e-07 58.2 122 33.6
Carub.0008s1381 Capsella rubella HOM05D000051 ORTHO05D000015 6.3e-07 58.2 118 31.4
CARHR053720 Cardamine hirsuta HOM05D000051 ORTHO05D000015 6.3e-07 58.2 167 31.1
C03p17990 Brassica napus HOM05D000051 ORTHO05D000015 8.2e-07 57.8 127 36.2
BolC3t14205H Brassica oleracea HOM05D000051 ORTHO05D000015 8.2e-07 57.8 96 37.5
Thhalv10015873m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 8.2e-07 57.8 197 26.9
A06p09830 Brassica napus HOM05D000051 ORTHO05D000015 1.1e-06 57.4 190 29.5
Carub.0004s0585 Capsella rubella HOM05D000051 ORTHO05D000015 1.1e-06 57.4 184 28.8
CARHR263690 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.1e-06 57.4 183 29.5
AT1G78750 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.4e-06 57.0 118 33.1
A05p27190 Brassica napus HOM05D000051 ORTHO05D000015 1.4e-06 57.0 188 30.3
A07p43970 Brassica napus HOM05D000051 ORTHO05D000015 1.4e-06 57.0 194 25.3
BraA05t21608Z Brassica rapa HOM05D000051 ORTHO05D000015 1.4e-06 57.0 188 30.3
AL6G33690 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.8e-06 56.6 122 32.0
AL8G28590 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.8e-06 56.6 115 29.6
Carub.0008s0328 Capsella rubella HOM05D000051 ORTHO05D000015 1.8e-06 56.6 125 31.2
AT1G66290 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 2.4e-06 56.2 194 26.3
AT5G44950 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 2.4e-06 56.2 121 31.4
BcaB08g37456 Brassica carinata HOM05D000051 ORTHO05D000015 2.4e-06 56.2 182 25.8
BraA03t10831Z Brassica rapa HOM05D000051 ORTHO05D000015 2.4e-06 56.2 114 36.8
CARHR052660 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.4e-06 56.2 166 32.5
AT5G22670 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 3.1e-06 55.8 122 32.0
AT5G44980 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 3.1e-06 55.8 118 33.1
BcaC05g25285 Brassica carinata HOM05D000051 ORTHO05D000015 3.1e-06 55.8 187 27.3
BcaC05g28161 Brassica carinata HOM05D000051 ORTHO05D000015 3.1e-06 55.8 74 48.6
C02p20260 Brassica napus HOM05D000051 ORTHO05D000015 3.1e-06 55.8 112 36.6
CARHR072300 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.1e-06 55.8 115 35.7
Thhalv10013489m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.1e-06 55.8 94 38.3
AL3G39560 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 4.1e-06 55.5 81 44.4
BcaB01g04216 Brassica carinata HOM05D000051 ORTHO05D000015 4.1e-06 55.5 89 37.1
A09p62770 Brassica napus HOM05D000051 ORTHO05D000015 4.1e-06 55.5 190 25.8
BraA09t41641Z Brassica rapa HOM05D000051 ORTHO05D000015 4.1e-06 55.5 190 25.8
CARHR266790 Cardamine hirsuta HOM05D000051 ORTHO05D000015 4.1e-06 55.5 81 38.3
A03p15410 Brassica napus HOM05D000051 ORTHO05D000015 5.3e-06 55.1 127 35.4
AL8G14480 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 6.9e-06 54.7 89 37.1
AL8G28370 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 6.9e-06 54.7 121 33.9
AT1G13780 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 6.9e-06 54.7 122 30.3
BraA09t41688Z Brassica rapa HOM05D000051 ORTHO05D000015 6.9e-06 54.7 190 24.7
Carub.0006s2044 Capsella rubella HOM05D000051 ORTHO05D000015 6.9e-06 54.7 92 33.7
Carub.0008s1389 Capsella rubella HOM05D000051 ORTHO05D000015 6.9e-06 54.7 82 36.6
Carub.0008s1413 Capsella rubella HOM05D000051 ORTHO05D000015 6.9e-06 54.7 78 39.7
AL4G18170 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 9.1e-06 54.3 188 25.0
A03p10840 Brassica napus HOM05D000051 ORTHO05D000015 9.1e-06 54.3 119 31.9
BraA03t10395Z Brassica rapa HOM05D000051 ORTHO05D000015 9.1e-06 54.3 131 26.7
BraA07t31904Z Brassica rapa HOM05D000051 ORTHO05D000015 9.1e-06 54.3 85 38.8
CARHR189230 Cardamine hirsuta HOM05D000051 ORTHO05D000015 9.1e-06 54.3 87 39.1
Thhalv10015350m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 9.1e-06 54.3 196 25.5
Thhalv10015903m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 9.1e-06 54.3 90 35.6


User provided reference genes

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