Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g25482 Brassica carinata HOM05D000203 ORTHO05D000135 3.6e-39 164.5 85 100.0
C08p44970 Brassica napus HOM05D000203 ORTHO05D000135 9.0e-22 106.7 123 56.1
A09p61410 Brassica napus HOM05D000203 ORTHO05D000135 2.0e-21 105.5 123 55.3
BraA09t41512Z Brassica rapa HOM05D000203 ORTHO05D000135 2.0e-21 105.5 123 55.3
BcaB03g14540 Brassica carinata HOM05D000203 ORTHO05D000135 1.3e-20 102.8 123 54.5
BcaC07g41501 Brassica carinata HOM05D000203 ORTHO05D000135 1.3e-20 102.8 123 55.3
BolC8t52043H Brassica oleracea HOM05D000203 ORTHO05D000135 1.3e-20 102.8 123 55.3
Aa31LG7G170 Aethionema arabicum HOM05D000203 ORTHO05D000135 2.7e-10 68.6 144 39.6
Thhalv10000479m.g Eutrema salsugineum HOM05D000203 ORTHO05D000135 2.7e-10 68.6 134 41.0
BcaB06g28019 Brassica carinata HOM05D000203 ORTHO05D000135 7.9e-10 67.0 140 39.3
BcaB08g34389 Brassica carinata HOM05D000203 ORTHO05D000135 7.9e-10 67.0 45 80.0
Thhalv10003338m.g Eutrema salsugineum HOM05D000203 ORTHO05D000135 2.3e-09 65.5 136 38.2
A04p19240 Brassica napus HOM05D000203 ORTHO05D000135 3.0e-09 65.1 141 39.7
BraA04t17524Z Brassica rapa HOM05D000203 ORTHO05D000135 3.0e-09 65.1 141 39.7
BcaC02g08396 Brassica carinata HOM05D000203 ORTHO05D000135 5.1e-09 64.3 141 39.0
C04p54730 Brassica napus HOM05D000203 ORTHO05D000135 5.1e-09 64.3 141 39.0
BolC4t27018H Brassica oleracea HOM05D000203 ORTHO05D000135 6.7e-09 63.9 141 39.0
CARHR028570 Cardamine hirsuta HOM05D000203 ORTHO05D000135 1.9e-08 62.4 138 36.2
CARHR116820 Cardamine hirsuta HOM05D000203 ORTHO05D000135 1.9e-08 62.4 138 37.7
BcaC07g40902 Brassica carinata HOM05D000203 ORTHO05D000135 3.3e-08 61.6 125 42.4
Nitab4.5_0002502g0020 Nicotiana tabacum HOM05D000203 ORTHO05D000135 3.1e-06 55.1 51 51.0
A06p11450 Brassica napus HOM05D000203 ORTHO05D000135 9.1e-06 53.5 50 60.0
THA.LOC104807204 Tarenaya hassleriana HOM05D000203 ORTHO05D000135 9.1e-06 53.5 70 44.3


User provided reference genes

Program Settings